Bubalus bubalis (water buffalo): 102410480
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Entry
102410480 CDS
T05912
Symbol
UIMC1
Name
(RefSeq) BRCA1-A complex subunit RAP80 isoform X1
KO
K20775
BRCA1-A complex subunit RAP80
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102410480 (UIMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bbub03400
]
102410480 (UIMC1)
DNA repair and recombination proteins [BR:
bbub03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
102410480 (UIMC1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RAP80_UIM
UIM
Rad50_zn_hook
DUF7385
zf-WRNIP1_ubi
Zn-C2H2_12
Motif
Other DBs
NCBI-GeneID:
102410480
NCBI-ProteinID:
XP_006076387
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Position
9:72630208..72769337
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AA seq
724 aa
AA seq
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MPRRKKKVKEASEAQNLEKKDVETTGSVNVKKKRRLEDAYIVISDSDGEEPKEENGLQKT
KAKQSNRAKCLAKRKIAQMTEEEQFALALKMSEQEAREVNSQEAEEEELLRKAIAESLNS
CRPSDASATRSRPLATGPSSQSHQQKTTDSGTTEGIWQLVPPSLFKGSHISQGNESEERE
EPWDHTENTEEEPVSGSSGSWDQSSQPVFENENVKCFDRCTGHLAEHTQCGKPQESTGRG
CAFHKAAQGRGDTSRHCLPTPADAKGLQDIGGTVHYFWGIPFCPDGVDPNQYTKVILCQL
EVYQKSLKMTQRQLLKKKGFGEPVLPRPPSLIQNECGQGDQASEKNEGISEDVGDEDKEE
RQESRASVWHSKTKDFQESPIKSLKEKLLLDEEPTTSHGQSSQGLFVEETSEEGTSVPAS
QSIAALTSKRSSAFMPKSSVEEITVCPETQLSSPETFDLEKEGFPDGRETLDEVRIMADK
EVLQVDNKKDAEKEISTSIFSSSAQVSCPLCDQRFPSTKIERHAMYCNGLMGQDTVLTRS
QREALNRRDSVTTAQTSLDIDKDEKCYLCKSLVPLREYQCHVESCLQLARGDQGDEPEES
ERVCTAVGRKRPQWLRNLKDKSQNEGRLLRLLEQSEYKAADAEIKTKFSETGAFRVSSPG
LEEAGCSREMQSSLTHLDSNESPIKSFVSISEATDCLVDFKKQLTVRPRSQTQTKAGRGR
RRKS
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgccacggagaaagaaaaaagttaaagaagcctctgaagctcagaacctggagaagaaa
gatgtagaaactaccggttctgtcaatgtgaagaagaagcgtagacttgaggatgcatac
attgtgatatctgatagtgatggagaggagccaaaggaggaaaatggattgcagaaaacg
aaggcaaaacagtcaaatagagcaaagtgtttggctaaaagaaaaattgcacaaatgaca
gaagaagaacagtttgctctggctctcaaaatgagtgaacaggaagctagggaggtgaac
agccaggaggcggaagaagaagaactcttgaggaaagccattgcggagagtctgaatagt
tgccggccttctgatgcttctgctaccagatctcgacctctggccactggaccatcttca
cagtcccaccaacagaaaaccacagactctgggaccactgaaggcatatggcagctggta
cctccatcactgtttaaaggctcacatatcagtcagggaaacgagtctgaggaaagagag
gagccttgggaccacactgaaaacactgaagaggagccggtctctggcagctcaggaagc
tgggaccaatcaagccagccagtgtttgagaatgagaacgttaaatgttttgacagatgt
actggccacttggctgagcacacacagtgtgggaagccacaggaaagtactgggaggggt
tgtgcttttcacaaagctgcccagggtaggggggacacatctaggcactgtctgcctacc
ccagcagatgccaaaggtctccaggacattgggggcactgtacactacttctggggtatt
ccattctgccctgatggagtagaccctaaccaatataccaaggtcattctctgccagttg
gaggtttatcaaaagagcctgaaaatgactcagaggcagctcttaaaaaaaaaaggtttt
ggggaaccagtgttacctagacctccttctctgatccagaatgaatgtggccaaggagat
caggctagtgaaaaaaatgaaggcatctcagaagatgtgggagatgaagacaaagaggag
aggcaggagtctagggcatctgtctggcactcaaaaaccaaggatttccaagaaagtcca
attaaaagcttgaaagagaaacttttgttggatgaagaaccaacaaccagtcatggtcag
tcttcccaaggactctttgttgaagaaacttctgaagaaggaacttctgtacctgcctca
cagagcattgctgctttgaccagtaagagaagttcagcctttatgccaaagagttctgtg
gaggaaatcactgtgtgtcctgagacacagctaagttctcctgaaacttttgaccttgaa
aaagaaggctttccagatggcagagagaccctggatgaagtaagaataatggcagataag
gaggttcttcaagttgataacaagaaagatgctgagaaagaaatatctacttctatcttc
tcatctagtgcccaggtatcctgcccactctgtgaccaacgcttcccatccacaaagatt
gagcgacatgccatgtattgcaatgggctgatggggcaagatacagtgttgactcggagt
caaagagaggccttgaacagacgtgacagtgtgacaacggctcagacttccctagacatt
gacaaggatgagaagtgttacctctgtaaatcccttgttccactcagagagtaccagtgt
catgtagagtcctgtctccagcttgcaagaggtgaccaaggagatgagcctgaagagagt
gagagagtatgcacagctgtggggaggaagcgtccacagtggctgaggaacctaaaggat
aaaagccaaaatgaaggccgtctcctccgtctcttggaacagtctgagtacaaggctgca
gatgcagagataaagaccaagttttcagaaacaggagccttcagggtgtcttcaccaggg
ctagaagaagcaggctgcagcagagagatgcagagttcccttacacatctcgattcaaat
gagtctcccatcaagtcttttgtttctatttcagaagccacagattgcttagtggacttt
aaaaagcagcttactgtccggccacgtagccagacacaaaccaaagcaggtagaggaaga
aggaggaaatcctga
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