Bubalus bubalis (water buffalo): 102410693
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Entry
102410693 CDS
T05912
Symbol
ZSWIM8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bbub04121
]
102410693 (ZSWIM8)
Ubiquitin system [BR:
bbub04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
102410693 (ZSWIM8)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
Motif
Other DBs
NCBI-GeneID:
102410693
NCBI-ProteinID:
XP_044798200
LinkDB
All DBs
Position
4:148839065..148853106
Genome browser
AA seq
1904 aa
AA seq
DB search
MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTGGGGG
GGSGGTRMRDGLVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAFWSFPENEEDI
RLYSCLANGSADEFQRGDQLFRMRAVKDPLQIGFHLSATVVPPQMVPPKGAYNVAVMFDR
CRVTSCSCTCGAGAKWCTHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLI
SELPQQILPTAQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLTDNIKK
TLHKFCGPSPVVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGVWNLLSIVREMFKR
RDSNAAPLLEILTDQCLTYEQITGWWYSVRTSASHSSASGHTGRSNGQSEVAAHACASMC
DEMVTLWRLAVLDPALSPQRRRELCVQLRQWQLKVIENVKRGQHKKTLERLFPGFRPAVE
ACYFNWEEAYPLPGVTYSATDRKLALCWARALPPRPGASRSGGLEESRERPRPLPAEPAV
RPKEPGAKRKGLGEGVPASQRGPRRLSAEGGDKALHKMGPGGGKAKTLGGAGCGGKGSVG
SGSKRRLSSEDSSLEPDLAEMSLDDSSLALGAEASTFGGFPESPPPCPHPGGSRGPSTFL
PEPPDTYEEDGGVYFSEGPEPPTASAGPPGLLPRELCTRDDLPSTDESGNGLPKTKEAAP
VVGEEDDDYQAYYLNAQDGAGGEEEKAEGGAGEEHDLFAGLKPLEQESRMEILFACAEAL
HAHGYSSEASRLTVELAQDLLANPPDLKVEPPPAKGKKNKVSTSRQTWVATNTLTKAAFL
LTVLSERPEHHNLAFRVGMFALELQRPPASTKALEVKLAYQESEVATLLKKIPLGPSEMS
TVRCRAEELREGTLCDYRPVLPLMLASFIFDVLCAPVVSPTGSRPPSRNWNNEMPGDEEL
GFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQARLKKILDKLLDRE
SQTHKPQTLSSFYSSSRPATASQRSPSKHGGPSAPGALQPLTSGSAGPAQPGSVAGAGPG
PTEGFTEKNVPESSPHSPCEGLPSEAALTPRPEGKVPSRLALGSRGGYNGRGWGSPGRPK
KKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAPTSWGRGQDSDSISSSSSDSLGSSSS
SGSRRASASGGARAKTVEVGRYKGRRPESHAPHVPNQPSEAAAHFYFELAKTVLIKAGGN
SSTSIFTHPSSSGGHQGPHRNLHLCAFEIGLYALGLHNFVSPNWLSRTYSSHVSWITGQA
MEIGSAALTILVECWDGHLTPPEVASLADRASRARDSNMVRAAAELALSCLPHAHALNPN
EIQRALVQCKEQDNLMLEKACMAVEEAAKGGGVYPEVLFEVAHQWFWLYEQTAGGSSTAR
EGATSCSASGIRAAGEAGRGLPEGRGGPGTEPVTVAAAAVTAATVVPVISVGSSLYPGPG
LGHGHSPGLHPYTALQPHLPCSPQYLTHPAHPAHPMPHMPRPAVFPVASSAYPQGVHPAF
LGAQYPYSVTPPSLAATAVSFPVPSMAPITVHPYHTEPGLPLPTSVACELWGQGTVSSVH
PASTFPAIQGASLPALTTQPSPLVSGGFPPPEEETHSQPVNPHSLHHLHAAYRVGMLALE
MLGRRAHNDHPNNFSRSPPYTDDVKWLLGLAAKLGDRHGDAAAAEPCSRPQPPACPGLPP
AGAALPAGIHAVHPPPPDSPDPRRLRRLCECHPQRSQRLLPDTHGYDAVQRHPAESQAQQ
TDQGAVAAGLTRDDHLLPLSLTPIGPYTGTQACGYGGPSPRGNESWLDRSSPLSSPVAQT
GSCSWAVGWGQDASDPRSLGLGETALSGSGHWVASGIYLAFINI
NT seq
5715 nt
NT seq
+upstream
nt +downstream
nt
atggagctgatgttcgccgagtgggaggacggagagcgcttctctttcgaggattcggac
cgctttgaggaggattcgctctgttccttcatctctgaggctgagagcctctgccagaac
tggcggggatggcgcaaacagtcagcggggcccaattcccccactggcggcggtggcgga
ggtggcagtggcggtaccagaatgcgagatggactggtgatcccactggtggagctgtca
gcaaagcaggtggcatttcatatcccatttgaagtggtggagaaagtttaccccccagtg
cctgagcagctacaactgcgcattgctttttggagcttccctgagaatgaagaggatatt
cgactctattcctgcctggccaacggcagtgcagatgagttccagcgaggggatcagctg
ttccgcatgagggctgtgaaggaccctctgcagatagggttccacctgagtgctacagtg
gtgccgcctcagatggtgccccccaaaggagcctacaacgtggctgtgatgtttgaccgc
tgccgagtcacttcctgcagctgcacgtgtggtgctggggccaagtggtgcacccacgtc
gtggccctctgcctcttccgcatccacaacgcttctgcggtctgcctgcgggcccccgtg
tcagagtccctgtctcggctgcagagggaccaactgcagaaatttgctcagtacctcatc
agtgagctcccacagcagatcctccccacagcccaacgtctcctggatgaactcctctcc
tcccagtcaacagccatcaatacagtgtgtggagccccggaccccacagcagggccctct
gcctccgatcagagtacgtggtatttggacgagtcaacgctcaccgacaacatcaagaag
acactgcacaagttctgcggcccctcccctgtggtgttcagtgatgtgaactccatgtat
ctgtcttccacggagcctccggccgccgccgaatgggcatgtctgctgcgccctctgagg
ggccgtgagccagagggcgtctggaacttgcttagcatcgtgcgggagatgttcaagcga
agggacagtaatgctgcccccttgttggaaatcctcactgaccagtgcctcacctatgag
cagataacaggctggtggtacagcgtgcgcacctcagcctctcacagcagcgccagtggg
cacacaggccggagcaatgggcagtccgaggtggcggcccatgcctgcgccagcatgtgt
gacgagatggtcaccttgtggagactggccgtgctggaccctgcactcagcccccagcgc
cgccgggaactgtgtgtgcagctgcgccagtggcagctgaaggtgattgagaatgtgaag
cggggacagcacaagaagaccctggagcggctcttccctggcttccggccggcagtggag
gcctgctacttcaactgggaagaggcctacccactgcccggcgtcacctacagcgccact
gaccggaagctggccctgtgctgggcccgagccctgccccctcggccgggcgcctcacgc
agtgggggcctggaagaatcccgggagcggccccggcctcttcctgccgagccagctgtg
cggcccaaggagccgggggccaaacgcaagggattgggtgagggggtccccgcatcacag
cggggtccccgccgcctctcggctgaggggggagataaggcactgcataagatgggtcca
ggtgggggcaaagccaaaacactgggtggggctggctgtgggggcaagggctcagtgggc
agtgggagcaagcgccggctgagcagtgaggacagctccctggagccggatctggctgag
atgagcctggacgacagcagcctggccctgggtgcagaggccagcaccttcggtggattc
cctgagagcccgccaccctgcccccaccctggtggctcgcgaggcccttctaccttcctt
cctgaacctccagatacttacgaagaagatggtggtgtgtacttctcagaagggcctgag
cctcccacagcctctgctggcccccctggcctgttgcccagggagctctgtacccgggac
gacctcccttccacagacgagagtggcaatggactccctaaaaccaaagaggcagcccct
gtggttggcgaggaggatgacgactaccaggcatactatctgaatgcccaggacggggct
gggggcgaggaagagaaggccgagggtggggctggggaggagcacgacctgtttgctgga
ctgaagccgctggagcaggagagccgcatggagatactgtttgcctgtgctgaggccttg
catgcgcatggctacagcagtgaggcctcccgcctcaccgtggaacttgcccaggacctg
ctagccaacccgcctgacctcaaggtagagccgccccctgccaagggcaagaagaataag
gtatctacaagccgccagacatgggtggctacgaacacactgaccaaggcagctttccta
ttgacagtgctaagtgagcgtccagagcaccacaacctggccttccgagtgggcatgttt
gccttggagctccagcggcccccagcttctaccaaggccttggaggtgaagctggcctat
caggagtctgaggtggccactctgctcaagaagatccctctgggtccaagtgagatgagt
acggtgcgttgccgggcagaggagcttcgtgaggggacgctctgtgattatcggccagtt
ttgcctctcatgttggccagtttcatctttgatgtgctctgtgctccagtggtttctccc
acgggttcccgacccccaagtcgcaactggaacaacgagatgcccggggacgaggagctg
ggatttgaagcagcagttgctgccttgggcatgaagacaacagtaagtgaggcagagcac
ccgctgctgtgtgaaggcacacgccgggagaagggcgaccttgccctggccctgatgatc
acttacaaagacgaccaggccagactcaagaagatcttagacaaactcttggaccgagag
agccagacgcataaaccacagacactgagttcgttctattcatccagccgcccggccaca
gccagccagaggtctccttcaaagcatgggggcccatctgccccaggggccctgcagcct
ctgacctcaggctctgcagggcctgctcagccagggagtgtggcaggggctgggccaggc
cccactgagggcttcacagagaagaatgtgcctgagagttccccacattccccctgtgag
ggtcttccatctgaagcagctctgaccccaaggccagaggggaaggttcccagccgcctg
gcacttggcagccgtggaggctacaacggacggggctggggctcaccagggcggcctaag
aagaagcacacaggcatggccagcattgacagcagtgcccctgaaacgacgtcggatagc
tccccaaccttaagcaggaggccgctgagagggggctgggcccctacctcctggggtcga
ggacaggacagtgacagcatcagcagctcttcctcagactcccttggctcctcgtcctcc
agtggaagtcgccgggccagtgccagtggaggggcccgggcgaagactgttgaagttggc
aggtacaagggccgccgtcccgagagtcatgccccccatgtacccaatcagccgtcagag
gcagctgcacacttctacttcgagctggcgaagacagtgctgatcaaggcagggggcaac
agcagcacttccattttcacacacccatcttcctcagggggccaccagggtcctcaccgc
aacctgcacctttgcgcctttgagatcgggctttatgcccttggcctgcacaactttgtt
tctcccaactggctctcacgtacttactcttcccacgtttcctggattacaggccaggca
atggagattggcagtgcagccctgactatactggtagaatgctgggatgggcacctgacg
ccccctgaggttgcgtccctggctgacagggcatcacgggcacgagactccaacatggtg
agggcagcggcggaactcgccctaagctgcctgcctcatgcccatgcgttgaaccccaat
gagatccagcgggccctggtgcagtgcaaggagcaggataacctgatgttggagaaggcc
tgcatggcagtggaagaggcggctaagggtgggggcgtataccccgaagtgttgtttgag
gttgctcaccagtggttctggctatatgagcaaacagcaggtggctcatccacagcccgt
gaaggggctacaagctgtagtgccagtgggatcagggcagctggggaggctgggcggggg
ctgcctgagggcagggggggcccagggactgagccggttacagtggcggcggcggcagtg
acagcagccacggtggtgccagtcatctcggtggggtccagtttatatccaggtccagga
ctggggcacggtcattcccctggcctgcacccctacactgctctacagccccacctgccc
tgcagccctcaatacctcacccacccagctcaccccgcccaccccatgcctcatatgccc
cggcctgccgtcttccctgtggccagctctgcatacccgcagggtgtgcatcctgcattc
ctaggggctcagtacccttactcggtgactcccccctcacttgctgccactgctgtgtct
ttccccgtcccttccatggcacccatcacagtacatccctaccacacagagccagggctc
ccactgcccaccagtgtggcctgtgagttgtggggacagggaacagtgagcagtgtccat
ccagcttccacgtttccagccatccagggtgcctcactgcctgccctgaccacacagccc
agccctctggtgagcgggggttttccaccacccgaggaggagacccacagccagcctgtc
aacccgcacagcctacaccacctgcatgctgcctaccgcgtcggaatgctggcactggag
atgctgggtcgccgggcacacaacgatcaccccaacaacttctctcgctcccctccctac
actgatgatgtcaaatggttgctggggctggcggcaaagctgggagatcgtcatggagac
gctgcagcggctgagccctgctcacgcccacaaccacctgcgtgccccggccttccacca
gctggtgcagcgctgccagcaggcatacatgcagtacatccaccaccgcctgattcacct
gacccccgccgactacgacgactttgtgaatgccatccgcagcgctcgcagcgccttctg
cctgacacccatgggtatgatgcagttcaacgacatcctgcagaatctcaagcgcagcaa
acagaccaaggagctgtggcagcgggtctcactcgagatgaccaccttctccccctgagt
ctgacccccatagggccctatacagggacacaggcctgtggctatgggggcccctcacca
agggggaatgagtcttggctggacagatcatccccactcagttccccagtagcccagact
ggcagctgctcttgggctgtaggttggggccaagatgcctcagaccctaggagcctaggg
ttgggggagacagccctgtctgggagcgggcattgggtggcctctggtatttatttggca
tttataaatatataa
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