Bubalus bubalis (water buffalo): 102411017
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Entry
102411017 CDS
T05912
Symbol
SS18L1
Name
(RefSeq) calcium-responsive transactivator isoform X1
KO
K15623
protein SSXT
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03082
ATP-dependent chromatin remodeling
bbub05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102411017 (SS18L1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
102411017 (SS18L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbub03036
]
102411017 (SS18L1)
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
102411017 (SS18L1)
GBAF(ncBAF) complex
102411017 (SS18L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
102411017
NCBI-ProteinID:
XP_025119590
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All DBs
Position
14:28601905..28629782
Genome browser
AA seq
402 aa
AA seq
DB search
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQSMTLGPGGLSQSGSAQGLHSQGSLSDAIGAGLPPSSLMQ
AQIGNGPNHVSLQQTAQSTLPTTSMSMSGSGHGSGPGYSHSGPASQSVPLQSQGAISNYV
SRANINMQSNPVSMMHQQAASSHYSAAQGGSQHYQGQSMAMMGQSGQGGGVMGQRPMAPY
RPSQQGSSQQYLGQEEYYGGEQYGHGQAASEPMSQQYYPDGHSDYAYQPASYTDQSYDRS
FEDSTQHYYEGGNSQYSQQQTGYQQGTAQQQTYSQQQYPNQQSYPGQQQGYGPAQGAPSQ
YSSYQQGQGQQYGSYRASQTGPSAQQQRPYGYEQGQYGNYQQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggctttcgcgtccgcccggccgagaggcaaaggcgaggtcacgcagcaaacc
atccagaagatgctggacgagaaccaccacctaatccagtgcatcctggactatcagagc
aagggcaagacagctgagtgcacccagtaccagcagatcctacaccggaacctggtctac
ctggccacgatcgcagactccaaccagaacatgcagtctttgctgcccgccccgccaacg
cagagcatgacgctgggcccgggagggctgtcccagagtggctcggcccagggcctgcac
tctcagggtagcctcagtgatgccatcggggccggcctgccaccctcctccctcatgcag
gcccagatcggcaacggtccgaaccacgtgtccctgcagcagacggcgcagagcacgctg
cccaccacctccatgagtatgtcgggcagtggccacggctcggggcccggctacagccac
tcaggccctgcctcgcagagtgtacccctgcagagccagggcgccatcagcaactacgtg
tcccgggccaacatcaacatgcagtccaacccagtgtccatgatgcaccagcaggcagcc
tcgtctcactacagcgcagcgcagggcggaagccagcactaccagggccagtccatggcc
atgatgggccagagcgggcaggggggcggcgtgatggggcagcggcccatggcgccctac
cggccctcccagcaaggctcgtcccagcagtacttgggccaggaggagtactacggcggt
gagcagtacggccacggccaggccgcttcagagcccatgagccagcagtactaccccgat
ggacacagcgactatgcctaccaaccggcgtcctacacagaccagagctacgaccggtcg
tttgaggactccacgcagcactactacgagggcggaaactcacagtacagccagcagcag
acagggtaccagcagggcacggcacagcagcagacgtactcccaacagcagtaccccaac
cagcagagctatcctggacaacagcaaggctatggacctgcccagggtgccccctcacag
tactccagctaccagcagggacaaggccagcagtacggaagctaccgagcatctcagacg
ggcccgtccgcccagcagcagcggccttatggctacgagcagggccagtacggaaattac
cagcagtaa
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