Bubalus bubalis (water buffalo): 102411147
Help
Entry
102411147 CDS
T05912
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X2
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102411147 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102411147 (CNOT3)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102411147 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
102411147 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
102411147
NCBI-ProteinID:
XP_025125530
LinkDB
All DBs
Position
18:complement(63183923..63199397)
Genome browser
AA seq
744 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDKQDRIEGLKRHIEKHRYHV
RMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALVA
TSPPSHSHMEDEIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQSP
AKNGSKPVHSSQHSQSPAVPPSYPPGPPPAASALSATPGSNGAPAAAAPASALGAKASPA
PSHSAGTPAPYAQAVAPPAPSGPPSAQPRPPSAQPGAGGGGGGNSGGGGGAGKQNGATSY
SSVVADSPAEAALSSTGGSSTGSQALGPPPGPHNPPPSTAKEPSATAPVGAGGVAPGSGN
NAGGPSLLVPLPVNPPSSPTPSFSEAKAAGSLLNGPPQFSAAPEIKAPEPLSSLKSMAER
AAISSGIEDPVPTLHLTERDILLSSTSAPPASAQPPLQLSEVNIPLSLGVCPLGPVPLTK
EQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTVEFYQRLSTE
TLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDY
EKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgcaaactccaaggtgagattgaccgctgcctcaagaaggtgtccgag
ggcgtggagcaatttgaagatatttggcagaagctccacaatgcagccaacgcgaaccag
aaagaaaagtatgaggctgatctaaagaaggagattaagaagcttcaacggctgagggac
cagatcaagacatgggtagcatccaacgagatcaaggacaagaggcagctcatagacaac
cgcaagctcattgagacgcaaatggaacggttcaaagtcgtggagcgagagaccaagacc
aaagcctacagcaaggagggcctgggcctggcacagaaggtggaccccgcccagaaggag
aaggaggaggtcggccagtggctcacgaacaccattgacaccctgaacatgcaggtggac
cagtttgagagcgaagtggagtccctgtcggtgcagacgcgcaagaagaagggtgacaag
gataagcaggaccggatcgagggcctaaagcggcacattgagaagcaccgttaccacgtg
cgtatgctggagaccatcctgcgcatgctggacaatgactccatcctggtggatgccatc
cgtaagatcaaagacgatgtcgaatactacgtggactcgtcccaggaccccgacttcgag
gagaacgagttcctctacgatgacctggacctcgaggacattccacaggcgctggtcgcc
acctccccccccagccacagccacatggaggacgagatcttcaaccagtccagcagcacg
cccacctcgaccacctccagttcgcccatcccgcccagcccggccaactgcaccacggaa
aactcggaagatgacaagaagaggggccgctcgacagacagtgaagtcagccagtctcca
gccaaaaacggctccaagcccgtccacagcagccagcactctcagtccccagctgtgccg
cccagctacccgcccggccccccacccgccgcctccgccctgagcgccacccctggcagc
aacggggccccggctgcggctgcccccgcgagcgctctgggcgccaaggccagcccggcg
cccagccacagcgcgggcacccctgccccctacgcacaggctgtggccccgccggccccc
agtgggccccccagcgcccagccccggccccccagcgcccagcctggggcgggaggcggc
ggcgggggcaacagcggcggaggcgggggcgccggcaagcagaacggtgccaccagttac
agctcggtggtggcggatagcccggcggaggcggcgctcagcagcacggggggcagcagc
actggcagccaggccctgggccccccgcccggcccccacaacccaccccccagcaccgcg
aaggaacccagtgccacagccccagtgggtgctgggggtgtggccccaggctcagggaac
aacgcagggggacctagcctcctggtgccactccctgtgaacccccccagctccccaacg
cccagcttcagtgaggccaaggcagctggcagcctgctgaacgggcctccgcagttcagc
gccgcacccgagatcaaggcccccgagcccctgagctcgctgaagtctatggcggagcgt
gcggccatcagctctggcatcgaagaccccgtacccacgctgcacctgaccgagcgagac
atcctcctgagcagcacgtcggcacccccggcctcggcccagccccccctgcagctgtcg
gaggtgaacatcccgctgtcgctgggcgtgtgtccactgggcccggtgcccctcaccaag
gagcagctctaccagcaggccatggaggaggccgcctggcaccacatgccccacccctcg
gactcagagcgcatccggcagtacctgccccggaacccttgtccaacgcccccctaccac
caccagatgccacccccacactcggacaccgtggagttctaccagcgcctgtccacggag
acgctcttcttcatcttctactatctggagggcacgaaggcgcagtacctggcggccaag
gccctgaagaagcagtcctggcggttccacaccaagtacatgatgtggttccagaggcat
gaggagcccaagaccatcacagacgagttcgagcagggcacctacatctactttgactac
gagaagtggggccagcggaagaaggaaggcttcacctttgagtaccgctacctggaggac
cgggacctccagtga
DBGET
integrated database retrieval system
