Bubalus bubalis (water buffalo): 102411260
Help
Entry
102411260 CDS
T05912
Symbol
HPS5
Name
(RefSeq) Hermansky-Pudlak syndrome 5 protein isoform X1
KO
K20191
Hermansky-Pudlak syndrome 5 protein
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbub04131
]
102411260 (HPS5)
Membrane trafficking [BR:
bbub04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
102411260 (HPS5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_HPS5
Beta-prop_HPS5
WD40_WDHD1_1st
PEP5_VPS11_N
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_CDC20-Fz
Beta-prop_RSE1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_1st
Beta-prop_Vps41
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
102411260
NCBI-ProteinID:
XP_006056119
LinkDB
All DBs
Position
5:106827069..106870452
Genome browser
AA seq
1130 aa
AA seq
DB search
MTFVPVIPESYSHVLAEFESLDPLLSALRLDSTRLKCTSIAVSRKWLALGSSGGGLNLIQ
KEGWKHRLFLSHREGAISQIACCLHDDDYVAVATSQGLVVVWELNQERRGKPERIYVSSE
HKGRKVTALCWDTAILRVFVGDHLGKVSAIKLNTSKQAKAAAAFVMFPVQTITTVDSCVV
QLDYLDGRLLVSSLTRSFLCDTEREKFWKIGNKERDGEYGACFFPEKCSAGQQPLIYCAR
PGSRMWEVNFDGEVLSTHQFKKLLSSPPLPVINLRSEPQYDHTIGSSQSLSFPKLLHISE
HCVLTWTERGIYIFIPQNVQVLLWSEVKDIQDVAVCKNELFCLHLNGKVSHLSLLSVERC
VERLIRRGLWNLAARTCCLFQNSVIASRGRKTLTVDKLEHLKSQLDLTTYGDLISQLEEL
ILKLEPLDSACSSRRSSISSHESFSILDSGIYRIINSRRGSQSDEDSCSLHSQTLSEDER
LKEFASHQEEDQPDHCCGSQGSEDNVSHASVTFETDKSETFLPFGIPLSFRSPSPLVSLQ
AVKESVSSFVRKTTEKIGTLHTSPDLKVRQEPRGDEQSCEEDVSPVTCPKEEDIEGEEEI
TSHPPEEDKFQELTMATAEAMTKLQDPLVLFEPKSLRMVLREWLSQLEKTFAVKDFSGIS
DTGSSSVESNQDMQLLDESRKGILDEEYEKEERDSSGNEETIDQTACESVNSLREPLDDD
VFQICSPWSIADSLQKDLAELTTLCLELSVLNSEIKSASGHGDHTLQQCSLEVLTCQFLK
KYFFLLDLKRAKESIKLSYPKSPCVWDTFIEGLKEMVSSSPTYIKMEEGDLPTRLKLLED
SVPFDSPLLIAYAARLYEKFGESALRSLIRFYPSILPSDVMQLCHHNPVQFLAYLDSLVK
SRPEDQRPSFLESLLQPESLRLDWLLLAVSHDAPPSTSIMDDEGNPRPHSHLFSWGYSQL
ILHLIKLPADFSTKEKMTDICRSHGFWPGYLILCLELERRREAFTNIVYLSDMSLMEGDN
GWIPETVEEWKLLLHLVQNTSTKPALQQSPDGNFSDGPSPITVENVALLLAKAMGPDRAW
SLLQECGLTLELSERFTRTCDILRIAEKRQRALIQSMLEKCDRFLWSQQA
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgacttttgtgccagtgataccagagtcctacagccatgttcttgcagaatttgagtct
ctggatccattactttcagccctgaggctggactccactcgtctaaagtgcacgagcata
gctgtgtctcgaaaatggttggctttgggcagttcaggaggaggactcaacctcattcag
aaagaaggctggaagcacaggctttttctttctcacagggaaggtgcaatttctcagatt
gcctgctgtttgcatgatgatgattatgttgctgtggctaccagtcaaggtcttgtagtt
gtttgggaattaaatcaagagcgtcgcgggaaaccagaacgaatttatgtgtcttcagaa
cacaaaggccgaaaagttacagctctctgttgggatacagctattcttagagtatttgta
ggtgatcatctggggaaagtttctgccatcaaactcaacacttctaagcaagcaaaggca
gctgctgcctttgtgatgtttcctgttcagacaataacgacagttgattcctgtgtcgtc
cagttagattatttggatggaagactccttgtatcttcgcttactcgatccttcttgtgt
gacaccgagagagaaaaattttggaaaattggaaacaaggaaagagatggagaatatgga
gcttgtttcttcccggaaaagtgttctgcaggccagcagcccctaatatactgtgctcgc
cctggctccaggatgtgggaggtgaactttgatggagaagttttaagcacacatcagttt
aagaaactcctctcctcaccacctcttcctgtgattaatctaagatcagaacctcagtat
gatcatacgattggatcctcccagtctttgtctttccccaaactcttacatattagtgag
cattgtgtgctgacttggacagaaagaggaatttatattttcattcctcagaatgttcag
gttcttctttggagtgaagtcaaagatattcaggatgtggctgtttgcaagaacgagctg
ttctgtctgcacctgaatgggaaggtctcacatctctccctgttgtcagtggagcgctgt
gtggaacgtctgataaggagaggcctgtggaacctggctgctcgaacttgctgtcttttc
caaaattctgtcattgccagcagaggaagaaaaactttaactgtagataaattggaacac
ttgaaatctcagctggacttaacaacctatggtgatctaatttcccaactggaagagttg
atcttaaaattggaacctttggattcagcctgtagcagtagaagaagctccatttcatca
catgaaagtttcagcattttggactctggtatttatcgtatcattaatagtagaagaggc
agtcagtcagatgaagactcttgttcccttcacagccaaacactctcagaagatgagaga
cttaaagagttcgcctcacatcaagaagaggaccagccagatcattgctgtggctcccag
ggaagtgaagataacgtttctcacgcatcagtgacatttgagacggataaaagtgaaact
tttctccccttcggcattccattatcatttcgttctccatctcctcttgtgtctcttcag
gctgtcaaggagagtgtttccagctttgtgcgtaaaactactgagaagattggcaccctt
catacaagccctgatctgaaagtgagacaagaacccaggggtgatgagcagtcctgtgaa
gaggatgtgagtccagtcacttgcccaaaggaggaagacattgaaggagaagaagaaata
actagtcaccctccagaagaggacaagttccaagagctcacaatggcaacagcagaagca
atgaccaagctacaggacccactggttttatttgaaccgaagtccctgagaatggtttta
cgggagtggctttcacagttagaaaagacatttgccgtgaaggacttttcaggcatttca
gatactggcagctcatccgtggaatcaaaccaggatatgcaattgcttgatgagtcaaga
aagggaatattagatgaagaatatgaaaaagaagaaagggactcttcaggcaatgaagaa
actattgatcaaacagcatgtgaatctgtaaatagtctgagggagcccttggatgatgac
gttttccaaatatgttctccttggagtatagcagacagtcttcagaaggatctggctgaa
ttgacaacattgtgtttggaactgagtgtattgaattctgagatcaaaagtgccagtgga
catggcgaccacactttgcagcagtgctctcttgaagtgctgacttgtcagttcctaaag
aagtacttttttcttctggatttgaaaagagcaaaggagagcatcaagctgagttaccct
aaaagtccttgtgtttgggatacttttattgaaggattgaaagaaatggtgagttccagt
cctacatatataaagatggaagaaggagaccttccaacaagattaaagttattggaggac
tcggttccttttgacagtcctttgttgattgcatatgctgcccgattgtatgagaaattt
ggagaatcagcccttcgatccttaatcaggttttacccatccattttgccttcagatgtc
atgcaactttgtcatcataatcctgttcagtttttggcctatttagatagtctggtgaaa
tcaaggcccgaagatcaacggccatccttccttgagtctcttctacagccagagtcttta
aggttggattggctgctgttggctgtgtcccatgatgctccgccaagcaccagcattatg
gatgatgaaggaaaccccaggcctcattctcacttgttttcctggggttacagtcagctc
atccttcatctgattaaacttcctgcagatttttcaacaaaagagaaaatgactgacatc
tgtaggtctcatggtttctggcctggatatcttattctctgtttggagctggagagaaga
agagaggccttcaccaacattgtgtatctgagtgatatgagcctgatggaaggggacaat
ggttggattccagaaactgtggaagaatggaagcttctcctacatctggtgcagaacaca
agcacaaagccagccctccagcagtcaccggatgggaacttcagcgatgggccttcccct
atcactgtggagaatgtggccctcctgttagctaaggccatgggcccagaccgggcctgg
tcactgctccaggaatgtggtttgaccctggagctgtcagagagatttactagaacctgc
gatatcctgagaattgctgagaaaaggcagagagccttgatacaaagcatgctcgaaaaa
tgtgatcggtttctctggtctcagcaggcctag
DBGET
integrated database retrieval system
