Bubalus bubalis (water buffalo): 102411287
Help
Entry
102411287 CDS
T05912
Symbol
SNUPN
Name
(RefSeq) snurportin-1 isoform X1
KO
K13151
snurportin-1
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102411287 (SNUPN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbub03041
]
102411287 (SNUPN)
Spliceosome [BR:
bbub03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
Other proteins involved in snRNP biogenesis
102411287 (SNUPN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPN1_m3Gcap_bd
Snurportin1
Piezo_TM25-28
mRNA_cap_enzyme
IBB
Motif
Other DBs
NCBI-GeneID:
102411287
NCBI-ProteinID:
XP_006080748
LinkDB
All DBs
Position
20:complement(37115878..37168837)
Genome browser
AA seq
374 aa
AA seq
DB search
MWRGGLSSGAGKMEELSQALAGSFSVSQDLNSTATPHPRLSQYKSKYSSLEQSERRRQLL
ELQKLKRLDYVNHARRLAEDDWTGMESEEEEEKKDDEEMDVDTGKELPKRYANQLMLSEW
LIDVPSDLGQEWIVVVCPVGKRSLIVASQGSTSAYTKSGYCVNTFPSLLPGGNRRNSTTE
KDYTILDCIYSEVNQTYYVLDVMCWRGHPFYDCQTDFRFYWLHSRLPEEEGLGEKTKLNP
FKFVGLKNFPCTPESLCKVLSMDFPFEVDGLLFYHKQTHYSPGSTPLVGWLRPYMVSDVL
GVAVPACPLTTKPEYAGYQLQQIIEHKKSQKEGIMGKLTPRASENGRYELEHLSTPKLKS
PPQSPNHPESLMEN
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgtggcggggaggactgtcgagtggagcagggaagatggaagaactgagtcaagccctg
gctggtagcttttctgtgtctcaagatctgaacagcacagccaccccacacccccgcctg
tcccagtacaagtccaagtacagttccttggagcagagtgagcggcggcgccagttactg
gaactgcagaaattaaagcggctggattatgtgaaccatgccagaagactggctgaagat
gactggacagggatggagagtgaagaagaagaagaaaagaaagatgatgaggaaatggac
gttgatactggcaaggagttaccaaaacgctatgctaatcaattaatgctgtcagagtgg
ttaattgacgtcccttcagatttggggcaggaatggattgtggtcgtgtgccctgttgga
aaaagatcccttatcgtggcttcccagggttctaccagtgcctacaccaagagtggctac
tgtgtcaacacgtttccttcccttctgccaggaggcaacaggcgaaactcaacaacagag
aaagactacaccattctggactgcatttacagtgaggtgaaccaaacctactacgttctg
gacgtgatgtgctggcggggacacccgttttatgactgccagactgatttccgattctac
tggttgcattcaaggttaccagaagaagaaggactgggagagaaaaccaagctcaatcca
tttaaatttgtgggactgaagaatttcccttgtacccctgagagcctgtgtaaggtgcta
tctatggacttcccttttgaggtggacgggcttctcttctaccacaagcagacccactac
agccctggaagcactcctctggtgggctggctgcgcccctacatggtgtcagatgttctt
ggtgtagctgtgccagcctgcccactgaccaccaagccagaatatgctggctaccagctc
cagcagatcattgagcacaagaagagccagaaggagggcataatggggaagctcacaccc
agggcctctgagaatggacgctatgagttggagcacctgtctacccccaagctgaagagc
cctccccagagccccaaccacccggagagcctcatggaaaactag
DBGET
integrated database retrieval system
