Bubalus bubalis (water buffalo): 102411371
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Entry
102411371 CDS
T05912
Symbol
CPSF7
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 7 isoform X2
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03015
mRNA surveillance pathway
bbub03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102411371 (CPSF7)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102411371 (CPSF7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102411371 (CPSF7)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
102411371 (CPSF7)
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Gene cluster
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Motif
Other DBs
NCBI-GeneID:
102411371
NCBI-ProteinID:
XP_044799528
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Position
5:complement(121290594..121317728)
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AA seq
462 aa
AA seq
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MSEGVDLIDIYADEEFNQDPEFNNTDQIDLYDDVLTATSQPSDDRSSSTEPPPPVRQEPS
PKPNNKTPAILYTYSGLRNRRAAVYVGSFSWWTTDQQLIQVIRSIGVYDVVELKFAENRA
NGQSKGYAEVVVASENSVHKLLELLPGKVLNGEKVDVRPATRQNLSQFEAQARKRIPPRA
HSRDSSDSADGRATPSENLVPSSARVDKPPSVLPYFNRPPSALPLMGLPPPPIPPPPPLS
SSFGVPPPPPGIHYQHLMPPPPRLPPHLAVPPPGAIPPALHLNPAFFPPPNATVGPPPDT
YMKASAPYNHHGSRDSGPPPSTVSEAEFEDIMKRNRAISSSAISKAVSGASAGDYSDAIE
TLLTAIAVIKQSRVANDERCRVLISSLKDCLHGIEAKSYSVGASGSSSRKRHRSRERSPS
RSRESSRRHRDLLHNEDRHDDYFQERSREHERHRDRERDRHH
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaggagttgacttgattgatatatacgctgatgaagaattcaatcaggaccca
gagttcaacaacacagatcagattgacctgtatgatgacgtgttgacagccacttcacag
ccttcagatgacagaagcagcagcactgagccacctcctcctgttcgccaggagccatct
cccaagcccaataacaagacgcctgcaattctgtacacctacagtggcctgcgcaatagg
cgagctgctgtctatgtgggcagtttctcctggtggaccacagaccagcagctgatccag
gttattcgctctataggagtctatgatgtggtggagttgaaatttgcagagaatcgagca
aatggccagtccaaagggtatgctgaggtggtggtagcctctgaaaactctgtccacaaa
ttgttggaacttctgccaggaaaagttcttaatggagaaaaagtggatgtgaggccggcc
acccggcagaacctgtcacagtttgaggcacaggctcggaaacgaatacctccacgggcc
cactcccgagattctagtgattctgctgatggacgggccacaccctctgagaaccttgtg
ccctcatctgcccgtgtggataagccccccagtgtgctgccctactttaatcgccctcct
tcagcccttcccctgatgggtctgcccccaccccccattccacccccaccacctctctcc
tcaagctttggggtccctcctcctcctcctggcatccactaccagcatctcatgccccct
cctcctcgattacctcctcatctggctgtacccccccctggggccatcccacctgccctt
cacctcaatccagccttcttccccccaccaaatgccacagtggggcctccaccagatact
tacatgaaggcctcagcaccctataaccaccatggcagccgagattcgggccctccgccc
tctacagtgagtgaagcagaatttgaagacatcatgaagcggaacagagcaatttccagc
agtgccatttccaaagctgtatctggagccagtgcaggggattacagtgacgcgattgag
acgctgctcacagccattgctgttatcaaacagtcccgggtcgccaatgatgagcgttgc
cgtgtcctcatctcctctcttaaggactgtcttcatggcattgaagccaagtcttacagt
gtgggtgccagcgggagctcgtccaggaaaagacatcggtcccgagagaggtcaccaagc
cggtcccgggaaagcagcaggaggcaccgggacctgcttcataatgaagatcggcatgat
gattacttccaagaaaggagccgagagcacgagagacaccgggatagagaacgggaccgg
caccactga
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