Bubalus bubalis (water buffalo): 102411453
Help
Entry
102411453 CDS
T05912
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
102411453 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbub04131
]
102411453 (SPATA13)
Membrane trafficking [BR:
bbub04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
102411453 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_2
SH3_9
Motif
Other DBs
NCBI-GeneID:
102411453
NCBI-ProteinID:
XP_025118619
LinkDB
All DBs
Position
13:complement(55429204..55536772)
Genome browser
AA seq
1208 aa
AA seq
DB search
MTTAQNGHGRGAAVPGSISDPKDPGMGTHPACRNGGCSGGGAGAREARLSPARILRLFSA
GPGRTRADRERPRPAGLVGSSSTWNALASFRKMGSFKKLKSSVLQGIQNREGWDTAKEGT
SDRDLGKSVPNGEAAGALGGRCAPGPGFASDGSDPEEPEDGFARNALRSRSLRRAYGLGR
IRLLDPEPPGPAACEAPEPPAREPERNGVCRRSKSTDSLTFLGKSSFRRKSASHLAELRA
AQEGRGPRRTLSGSSADSDGSGGAPTRPRRWRSPLRVPDLARVLRLAGGGTAGRTGDSGN
AASGPRPLSRLHDDYSRRAAAAPEGCGRGPAEPRDQGQVGAGGPPRAAVPEGAAPRAQGS
PSSPLAREMLDRDSDEPGPGDRFPSEPEHPLGPLRPTTPKPPSPRSPDAASAKCPSSVSA
LSLSSADSEERAEGPAQREQGLGSSQEALPATCDQGREDSGASSHAQPSHGGADGPEDKT
EEVVTEGSWRQAPPPEEERTEAQRIPRRRLGSGRRSRPRPLSDYGQLVARSLSIPEDSIA
VDPQKEDAADSDHQPSVAPTDPADQTPAGGCPQGGPRRRPISVIGGVGFYGSSQTEEGEA
LLPQPAARPPVPAHQVPPYRAVSARLRPCAFSQSTPIGLDRVGRRQHLRASNVSSDGGAE
PSALVDDNGSEEDFSYEDLCRANPRYLQPGGEQLAINELIGDGSVVCAEALWDHVTMDEQ
ELGFKAGDVIQVLEASHKDWWWGRSADREAWFPASFVRLRVNQEELSEGSSGSPSEEQEE
DTGRARHKHPESKQQMRANVVQEIMDTERVYIKHLRDICEGYIRQCRKHTAMFSVAQLAT
IFGNIEDIYRFQRKFLKDLEKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPGACAE
LAGLMQQRRYRHFFEACRLLQQMIDIALDGFLLTPVQKICKYPLQLAELLKYTAPEHSDY
DNIKAAYEAMKNVACLINERKRKLESIDKIARWQVSIVGWEGQDLLERSSELIHSGELTS
VTRQGKSQQRTFFLFDHQLVFCKKDLLRRDVLYYRGRADTDAMELVDLEDGRDGARGPGL
RNAFRLASRTGDEVHLFCARKPEDKARWLQAFRDERRRVQEDRALGMEISENQKKLAMLN
AQKAAHGKSKGYGGCPAAPPLQSLRPIHQRHITVPSSLPQQQVFALAEPKRKPSLFWHTF
NKLAPFRK
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgaccacggcgcagaacggccacgggcgtggagctgcggtacctggttccatctctgac
cccaaggaccccggcatggggacccacccggcgtgccgcaacggcggctgcagcggcggc
ggcgcaggcgcccgggaggcgcggctcagcccggcccgcatcctgcgcctcttctctgcc
ggccctggcaggacgcgcgccgaccgcgagcggccccggcccgccggcctcgtgggcagc
tcgtccacgtggaacgccctggcctccttccggaaaatgggctctttcaaaaaactcaag
tcctcggtcctccagggcattcagaaccgggaggggtgggataccgcgaaggagggaacc
tcggaccgcgatctgggcaagtccgtccccaacggcgaggcggccggggcccttgggggc
aggtgtgcccctgggcccggcttcgcctccgacggctcggaccccgaggaaccagaggac
ggcttcgcgcgtaatgccctccggtcgcggagcctccgacgtgcctacggcctggggcgc
atccgcctcctcgacccggagccccccgggccggcggcgtgcgaggcgccggagccccca
gcgcgcgagcccgagcggaacggtgtctgccggcgcagcaagagcaccgacagcctgacc
ttcctcgggaaaagctccttccgaaggaagtccgcctcgcacttggccgagctgcgggcc
gcgcaggagggccgggggccccgcaggacgctgagcggctcgtccgctgactccgacggc
tcgggcggggcccccacgaggcccaggcgctggaggagcccgctgcgggtgccggacctg
gctcgcgtgctccggctcgcagggggtggcacggccggccggactggggactccgggaat
gcagcgtccgggccgcggccgctcagccggctgcacgatgactattcccgccgcgcggct
gctgcccccgaggggtgcggacgggggcctgcggagccccgagaccagggccaggtgggt
gcaggaggaccgcccagggcagcggtcccagaaggtgccgctcctcgcgcccagggctct
ccgtccagcccactggcccgggagatgttggacagagactccgacgaaccgggacctggc
gaccggtttccctcggagcctgagcatcctctagggcctctgaggcccaccacgcccaag
ccccccagccctcggagccccgatgcagcgagtgccaagtgtcccagcagtgtcagcgcg
ctgtccctgagctcagcggacagcgaggaaagggccgaggggcccgcgcagagggagcaa
ggtctcgggtcctcccaggaggccttgccagccacctgtgaccagggcagggaggacagc
ggcgccagcagccacgctcagcccagccatgggggggcggacggtccagaagacaagaca
gaagaggttgtgaccgaggggtcctggaggcaggctcccccaccggaggaagaaaggacg
gaggctcagaggatccccaggaggagactggggtctgggaggaggtcgaggccccgacca
ctctctgactatggccagctggtcgcccgaagtctgtctatcccagaagactcgatcgcc
gtggacccccagaaagaggacgctgcggacagtgaccaccagcccagcgtggcccccaca
gaccctgcagaccagactcctgctgggggctgtccccaggggggcccaagaagacgcccc
atctccgtgatcggtggggtcggcttctatgggagcagccagacggaggagggggaagcc
ctcctgccccaacccgccgcccggccgcccgtgcccgcacaccaggtgccaccctacagg
gcggtgtcagcccggctgcggccctgtgccttctcccagagcacccccatcgggctggac
cgtgtgggacgccggcaacacctgagagcgtccaacgtttcttccgatggaggtgcggag
ccgtctgccctagtggatgacaacggcagcgaggaggacttcagctatgaggacctgtgt
cgggccaacccccgatacctgcagccgggtggggagcagctggccatcaacgagctgatc
ggcgatggcagcgtggtctgcgcagaggccctgtgggaccacgtgaccatggacgaacag
gagctgggcttcaaggcgggggacgtcatccaggtcctggaggcttcgcacaaggactgg
tggtggggtcgcagcgcagacagggaggcatggttcccagccagcttcgttcggctgcgc
gtcaaccaggaggagctgtcagagggctccagcggcagccccagcgaagagcaggaggag
gacacgggtagagcccgccacaagcaccccgagagcaagcagcagatgcgggccaacgtg
gtccaggagatcatggacacggagcgcgtgtacatcaagcacctccgggacatctgtgag
ggctacattagacagtgtcgcaagcacacggcaatgttctcagttgcacaactggccacc
attttcggaaacattgaagacatttacagattccaaagaaagttcttgaaagaccttgag
aagcagtacaataaagaggaacctcacctgagtgaaatagggtcctgcttccttcagcac
caagagggcttcgccatctactcagagtattgcaacaaccacccgggcgcctgcgcagag
ctggcgggcctgatgcagcagcgccgctaccggcacttcttcgaggcctgccggttgctc
cagcaaatgatcgacatcgcgctggacggcttcctgctgactcccgtgcagaagatctgc
aagtacccgctgcagctggccgagctgctcaagtacaccgcgccggagcacagtgattac
gacaacataaaggcagcgtatgaggccatgaagaatgtcgcctgcctgatcaatgagcgg
aaacgcaagctggaaagcatagacaagatcgcgcggtggcaggtgtccatcgtgggctgg
gagggccaggacctcctggagcgcagctcggagctgatccactccggggagctgaccagt
gtcacgcggcagggcaagagccagcagcgcaccttcttcctgttcgaccaccagctggtg
ttctgcaagaaggacctgctgcgcagggacgtgctgtactaccgcggccgcgccgacacg
gacgccatggagctggtggacctggaagatggccgcgatggcgcccgcgggccgggcctc
aggaacgccttcaggctggccagccgcacaggcgatgaggtgcacctgttctgcgccagg
aagcccgaagacaaggcacggtggctgcaggccttcagggacgagcgccggcgggtgcag
gaggaccgggcactgggaatggaaatttcagaaaatcaaaagaaactcgccatgttaaac
gctcaaaaggcagcacacggaaagtcaaaaggctacggcggctgccccgcggcccccccg
ctccagagcctgcggcccatccaccagcgccacatcaccgtgcccagcagcctgccgcag
cagcaggtgttcgccctggctgagcccaagaggaagccgtcgctcttctggcacaccttc
aacaagcttgcccccttcaggaagtga
DBGET
integrated database retrieval system
