Bubalus bubalis (water buffalo): 102411533
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Entry
102411533 CDS
T05912
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04110
Cell cycle
bbub04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102411533 (SMC3)
04114 Oocyte meiosis
102411533 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbub03036
]
102411533 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bbub00535
]
102411533 (SMC3)
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
102411533 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
102411533 (SMC3)
Proteoglycans [BR:
bbub00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
102411533 (SMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
102411533
NCBI-ProteinID:
XP_006043987
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All DBs
Position
23:31124859..31163049
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AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLDHFRRKGINQHVQNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacataaagcaggttattatccagggttttcgaagttatagagatcaaacaattgta
gacccgttcagttcaaaacataatgttattgtgggcagaaatggatctggaaaaagtaac
tttttttatgcgattcagtttgttctcagtgatgagtttagtcatcttcgtccggaacag
cgattggctttgttacatgagggtactggtcctcgtgttatttctgcttttgtggagatt
atttttgacaattcagacaaccggttaccgatcgacaaagaagaagtttcacttcgaaga
gttatcggtgccaaaaaggatcagtatttcttagacaagaaaatggtcacgaaaaatgat
gtgatgaatctccttgaaagtgctggtttttctcgaagcaatccttattatattgttaaa
caaggaaagattaaccagatggcaacagcaccagattctcagagactaaaactattaaga
gaagtagctggtactagagtgtatgatgaacgaaaagaagaaagcatatctttaatgaag
gaaacagagggaaaacgggaaaaaatcaatgagttgttaaaatacattgaagagagatta
cataccttagaggaagaaaaggaagaactagctcagtatcaaaagtgggataagatgaga
cgagccctggaatataccatttacaatcaggaacttaacgagactcgtgctaaacttgat
gagctttctgctaagcgagagacaagtggagaaaaatctagacaattaagagatgctcag
caagatgcaagagataaaatggaggatattgagcgccaagttagagaactgaaaacaaaa
atttcagctatgaaagaagaaaaggaacagctcagtgctgaaagacaggaacaaattaag
cagagaactaaattggagcttaaagccaaggatttacaagatgaattggcaggcaatagt
gaacagaggaaacgcttattaaaagaaaggcagaagctgcttgaaaaaatagaagaaaag
cagaaagaactggcagaaacagaacctaaattcaacagtgtaaaagaaaaagaagagcga
ggaattgctagattggcccaagctacccaagagagaacggacctttatgcaaagcagggt
cgaggaagccagtttacatcaaaagaagaaagggataagtggattaaaaaggaactcaag
tctttagatcaagctattaatgacaagaaaagacagattgctgctatacataaggatttg
gaggacactgaggcaaataaagagaaaaatctggagcagtataataaactggatcaggat
cttaatgaagtcaaagctcgggttgaagaactggacagaaaatactatgaagtaaaaaat
aagaaagatgaattacaaagtgaaagaaattacttgtggagagaagagaatgcagaacag
caggcacttgctgctaaaagagaagatcttgaaaagaaacagcaactccttagagctgca
acaggaaaggccattttaaatggaatagacagcataaataaagtgctagaccacttccgt
cgaaaaggaataaaccagcatgttcaaaatggctatcatggtattgtgatgaataacttt
gaatgtgagcctgctttctacacatgtgtggaagtcactgctggaaacaggttattttat
cacattgttgattcagatgaagtcagcacaaagattttgatggagtttaataaaatgaat
cttcctggagaggttactttcctgcctcttaacaagttagatgtaagagataccgcctat
cctgaaaccaatgatgctattcctatgataagtaaattgaggtacaatcccagatttgac
aaagctttcaaacatgtatttggaaaaacacttatttgtcgtagtatggaagtttcaacc
cagttggcccgtgctttcactatggactgcataaccttggaaggtgaccaagttagtcat
cgaggtgctttgactggaggctattatgatacaaggaagtctagacttgaattacaaaaa
gatgttagaaaagcggaagaagaacttggtgagcttgaagcaaagctcaatgaaaatctg
cgcagaaatattgaaaggattaataatgaaattgatcagcttatgaaccaaatgcagcaa
atagagactcagcaaaggaaatttaaagcatctcgagatagcatattatcagaaatgaag
atgttaaaagagaagaggcagcagtcagagaaaacctttatgcccaagcaacgtagctta
caaagtttggaggcgagtttgcatgctatggagtccaccagagaatcactgaaagcagaa
ctgggaactgatttgctttctcaacttagtcttgaagatcagaagagggtagatgcactg
aatgatgaaattcgtcaacttcagcaggaaaacagacaactactgaatgaaagaattaaa
ttagaaggtattattactcgagtagagacttacctcaatgagaatttgagaaaacgcttg
gaccaagtagaacaggaactcaatgaactgagagagacagaagggggtactgttctcact
gctacaacctcagaacttgaagccatcaataaaagggtgaaagataccatggcaagatca
gaagatttggacaattccatcgataaaacagaagctggaattaaggagctgcagaagagt
atggagcgctggaaaaatatggaaaaagaacacatggatgctataaatcatgacactaaa
gaactagaaaagatgacaaaccgacaaggcatgctgctgaagaagaaagaagagtgcatg
aagaaaattcgagaacttggatcacttccacaggaagcatttgaaaaataccaaacactg
agcctcaaacagttgtttcgaaaacttgaacagtgcaacacagaattgaagaagtatagc
catgttaacaaaaaagctttagatcagtttgtaaatttctcggagcagaaagaaaagtta
ataaagcgacaagaagagttggacagggggtacaaatcaatcatggaactgatgaatgta
cttgaacttcgaaaatacgaagctattcagttaactttcaaacaggtatccaaaaacttt
agtgaagtattccagaagttggtccctggtggcaaagctactttggtgatgaagaaagga
gatgtggaaggcagtcagtctcaggatgaaggagaagggagtggtgaaagtgagaggggc
tctggatcacaaagcagcgttccatcagttgaccagttcactggagttggaattagggtg
tcatttacaggaaaacaaggtgaaatgagagaaatgcaacagctttcgggtggacagaaa
tccttggtagctcttgctctgatttttgccattcagaaatgtgacccagctcctttttac
ttgtttgatgagattgaccaggctctggatgctcagcacagaaaggctgtgtcggatatg
attatggagcttgctgtacatgctcaattcattacaactacttttaggcctgaactgctt
gagtcagctgacaaattctatggtgtgaagttcagaaataaggttagtcatattgatgtg
atcacagcagagatggccaaagactttgtagaagatgataccactcatggttaa
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