Bubalus bubalis (water buffalo): 102411667
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Entry
102411667 CDS
T05912
Symbol
VHL
Name
(RefSeq) von Hippel-Lindau disease tumor suppressor
KO
K03871
von Hippel-Lindau disease tumor supressor
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04066
HIF-1 signaling pathway
bbub04120
Ubiquitin mediated proteolysis
bbub05200
Pathways in cancer
bbub05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102411667 (VHL)
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
102411667 (VHL)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102411667 (VHL)
09162 Cancer: specific types
05211 Renal cell carcinoma
102411667 (VHL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bbub04121
]
102411667 (VHL)
Ubiquitin system [BR:
bbub04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
102411667 (VHL)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VHL
VHL_C
CDC37_N
Motif
Other DBs
NCBI-GeneID:
102411667
NCBI-ProteinID:
XP_006070757
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Position
21:complement(16677840..16684597)
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AA seq
193 aa
AA seq
DB search
MPRKAGDAEEAEAGAEEASAEDPGAEREMEAGRLRPVLRSVNTREPSQVIFCNRSPRVVL
PVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFRDAGTSDGLLVNQTELFVPSLNVDGQ
PIFANITLPVYTLKERCLQVVRSLVKPEDYRRLDIVRSLYEDLEDHPNVRKDLVRLTQEH
IESQRTAGEIEDV
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgccccggaaggcgggggacgcggaagaggctgaggccggcgctgaggaggcgagtgca
gaggaccccggcgccgagcgggagatggaggccgggcggctgcggccggtgctgcgctcc
gtgaacacgcgcgagccgtcccaggtcatcttctgcaaccgtagcccgcgcgtggtgctg
cccgtgtggctcaacttcgatggcgagccccagccttacccgacgctgccccccggcacg
ggccgccgcatacacagctaccgaggtcacctttggctcttccgagatgctgggacatct
gatgggcttctagttaaccaaactgagctatttgtgccatctctcaatgttgatggccag
cctatttttgccaacatcacactgccagtgtacaccctgaaagagcggtgcctccaggtt
gtgcgaagcctggtcaagcctgaggattacaggagactggacattgtgcgatccctctac
gaagatctggaagaccaccccaacgtgcggaaggacctggtgcggctgacgcaggagcat
attgaaagccagcggacggcaggggagattgaagatgtttag
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integrated database retrieval system