Bubalus bubalis (water buffalo): 102411911
Help
Entry
102411911 CDS
T05912
Name
(RefSeq) RNA-binding protein 12 isoform X5
KO
K24524
copine 1/2/3
K24526
RNA-binding protein 12
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bbub03041
]
102411911
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bbub04990
]
102411911
Spliceosome [BR:
bbub03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
102411911
Domain-containing proteins not elsewhere classified [BR:
bbub04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
102411911
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
RRM_1
C2
vWA-TerF-like
VWA
Motif
Other DBs
NCBI-GeneID:
102411911
NCBI-ProteinID:
XP_025119346
LinkDB
All DBs
Position
14:18781209..18817421
Genome browser
AA seq
1487 aa
AA seq
DB search
MAVVIRLQGLPIVAGTMDIRHFFSGLTIPDGGVHIVGGELGEAFIVFATDEDARLGMMRT
GGTIKGSKVTLLLSSKTEMQNMIELSRRRFETANLDIPPANASRSGPPPSSGMSGRVNLP
TTVPNFNNPSPSVVTATTSVHESSKNIQTFSTASVGTAPPNMGASFGSPTFSSTVPSTAS
PMNTVPPPPIPPIPAMPSLPPMPSIPPIPVPPPVPTMPPVPPVPPIPPVPSVPPMTPLPP
MSGMPPLNPPPVAPLPAGMNGSGAPVNLNNNLNPVFLGPLNPVNPVQMNSQSSVKPLPIN
PDDLYVSVHGMPFSAMENDVRDFFHGLRVDAVHLLKDHVGRNNGNGLVKFLSPQDTFEAL
KRNRMLMIQRYVEVSPATERQWVAAGGHITFKQSIGPSGQTHPPPQPLPRSKSPSGQKRS
RSRSPHEAGFCVYLKGLPFEAENKHVIDFFKKLDIVEDSIYIAYGPNGKATGEGFVEFRN
EADYKAALCRHKQYMGNRFIQVHPITKKGMLEKIDMIRKRLQNFSYDQREMILNPEGDVT
SAKVCAHITNIPFSITKMDVLQFLEGIPVDENAVHVLVDNNGQGLGQALVQFKNEDDARK
SERLHRKKLNGREAFVHVVTLEDMREIEKNPPAQGKKGLKMAVPGNPAVPGIPNVGMPNA
GLPSSGMPSAGLPNAGMPNAGIPAAGMPNAGMPAAGMPNAGIPSAGMPAAGMPGVGMPGA
GMPSAGGEEHAFLAVGSKEANSGPPFNFPGNFGGSNAFGPPLPPPGLGGAFGDARPGMPS
VGSSGLPGLGLDVPGFGGGPNNLSGPGFGGGPQNFGNGPGSLGGPPGFGSGPPGLGNAPG
HLSGPPAFGPGPGPGPGPIHIGGPPGFGSSSGKPGPTIIKVQNMPFTVSIDEILDFFYGY
QVIPGSVCLKYNEKGMPTGEAMVAFESRDEATAAVIDLNDRPIGSRKVKLMAHCVTLVQL
SVSCDHLIDKDIGSKSDPLCVLLQDVGGGNWTELGRTEQVQNCSSPEFSKTLQLEYHFET
VQKLRFGIYDIDNKTPELGDDDFLGGAECSLGQIVSSRMLTLPLMLKPGKPAGRGTITVS
AQELKDNRVVTMEVEARNLDKKDFLGKSDPFLEFFRQGDGKWHLAYRSEVIKNNLNPTWK
RFSVPLQHFCGGDPSTPIQVRCSDHDRDGSHDLIGTFHTSLAQLQAAPAEFECIHPEKQQ
KKKSYKNSGTICVKMCQVETEHSFLDYVMGGCQINFTVGVDFTGSNGDPSSPDSLHYLSP
TGVNEYLTALWSVGSVVQDYDSDKLFPAFGFGAQVPPDWQVSHEFALNFNPSNPFCAGIQ
GIVDAYRQALPQVRLYGPTNFAPIINHVARFAAQAANQRNASQYFVLLLLTDGAVTDVEA
TREAVVRASYLPMSVIIVGVGCADFEAMEQLDADGGPLHTRSGEAAARDIVQFVPYRRFQ
NAPREALAQTVLAEVPTQLVSYFRAQGWAPFKPPPSAAKGPAQAPQA
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggtcatccgtttgcaaggtctcccaattgtggcggggaccatggacattcgc
cacttcttctctggattgaccattcctgatgggggcgtgcatattgtagggggtgaactg
ggtgaggctttcatcgtttttgccactgatgaagatgcaaggcttggtatgatgcgcaca
ggtggtacaattaaagggtcaaaagtaacactgttgttgagtagtaaaacggaaatgcag
aatatgattgaactgagtcgtaggcgttttgaaactgccaacctagatataccaccggca
aatgctagtagatcaggaccgccacctagctcaggaatgagtggcagggtgaacttgcct
acaacagtacccaactttaataatccttcacccagtgtagttactgccaccacttctgtt
catgaaagcagcaaaaacatacagacattttccacagccagcgtaggaacggctcctcca
aatatgggggcttcctttgggagcccaacgtttagctcaactgttccgagcacagcctct
ccgatgaacacagtcccacctccaccaattcctccaatcccagcgatgccatctttgccg
ccaatgccgtctattcccccaattccagttcctcctccggtacctacaatgcctcctgtg
cctcctgtgcccccaattcccccagtcccttctgtgccacccatgaccccactgccaccc
atgtcaggcatgccacctttgaacccgccacctgtggcgcctctacctgctggaatgaat
ggctctggagcacctgtgaatctgaacaataacctgaaccctgtgtttctgggtccattg
aatcctgttaaccctgtccagatgaactcgcaaagcagtgtgaaaccacttcccatcaac
cctgatgatctgtatgtcagtgtgcatggaatgcccttttctgcaatggaaaatgatgtc
cgagactttttccatgggctccgtgttgatgcggtgcatttgttgaaagatcatgtaggt
cgaaataatgggaatggattggttaagtttctctcccctcaagatacatttgaagctttg
aaacgaaacagaatgctgatgattcaacgctatgtggaagttagtcctgccacagagaga
cagtgggtagctgctggaggccatatcacttttaagcaaagtataggaccttctggacaa
acccatccccctcctcagccacttcccaggtcaaaatcgcccagtgggcagaaaaggtca
aggtcaagatcaccacatgaggctggtttttgtgtttacttgaaagggctgccatttgaa
gcagaaaacaaacatgtcattgatttttttaaaaagttggatattgtggaagatagtatt
tatattgcttatggacccaatgggaaagcaacgggtgaaggcttcgtagagttcaggaat
gaggctgactataaggctgctctgtgtcgtcataaacaatacatgggtaatcgctttatt
caagttcatccaattaccaagaaaggtatgctagaaaagatagatatgattcgaaaaaga
ctgcagaacttcagctatgaccagagggaaatgatcttaaatccggagggggatgtcacc
tctgccaaagtctgtgcccatataacaaatattcccttcagcattaccaagatggatgtt
cttcagttcctagaaggaatcccagtggatgaaaatgctgtacatgttcttgttgataac
aatgggcaaggtctaggacaggcattggttcagtttaaaaatgaagatgatgcacgtaag
tctgaacgcttacaccgtaaaaaacttaatgggagagaagcttttgttcatgtagttact
ttagaagatatgagagagattgagaaaaatcctcctgcccaaggaaaaaaggggttaaag
atggctgtgccaggtaatcctgcagttccaggaattcccaatgtgggaatgcccaatgcg
ggattgcccagttcaggaatgcccagtgcgggactgcctaatgcgggaatgcccaatgca
ggaatacctgctgcgggaatgcccaatgcaggaatgcctgctgcaggaatgcctaatgca
ggaattcccagtgcaggaatgcctgctgccggaatgcctggtgtgggaatgcccggtgcg
ggaatgcctagtgcaggaggtgaagagcatgccttcttggctgtaggatctaaggaggcc
aacagtgggcctccatttaactttcctggtaattttggtgggtcaaatgcctttggacca
ccactccctcctccaggattaggaggggcctttggtgatgctaggcctggaatgccttca
gttggaagtagtggtttgcctggtctaggactggatgttccaggttttggaggtggacca
aataatttaagtggaccaggatttggagggggccctcagaattttggaaatggccctggt
agcttaggtggcccccctggctttggaagtgggccccctggccttggaaatgcccctggg
catttgagtgggcctccagcctttggtcctggtcctggtcctggccctggcccaatccac
attggtggtcctcctggctttggatctagttctggaaaaccaggaccaacaataattaaa
gtacagaacatgcccttcactgtgtctattgatgagattttagatttcttttacggttat
caagtgatcccgggctcagtgtgtttaaagtacaatgaaaaaggtatgcccaccggtgaa
gctatggtggctttcgaatctcgggatgaagccacagctgctgtcattgacttaaatgac
agacctattggctctagaaaagtaaaacttatggcccactgtgtgaccttggttcagctg
tctgtttcatgtgaccacctcatcgacaaggacatcggctccaagtctgacccactctgt
gtccttttacaggatgtgggagggggtaactggactgagcttggccggactgagcaagta
cagaactgctcgagccctgagttctccaagactctgcagcttgagtaccactttgaaaca
gtccaaaagctccgatttggcatctatgacatagacaacaagacacctgagctgggggac
gatgacttcctaggaggagctgagtgttccctgggacagattgtatccagtcggatgcta
actctgcccttgatgctgaagcctggaaagcctgctgggcgggggaccatcacggtctca
gctcaggagttgaaagataatcgtgtagtgaccatggaggtggaagccagaaacctggat
aagaaggacttcctgggaaaatcggatccgttcttggagtttttccgtcagggtgatggg
aaatggcacctggcatacagatcagaggtcatcaagaacaacctgaatcctacttggaaa
cggttctctgttccccttcaacatttctgtgggggagaccccagtacacccatccaggtg
cgatgctccgatcatgacagggatggctcacatgacctcattggtaccttccacaccagc
ttggctcagctgcaagcagccccagctgagtttgaatgcattcaccctgagaaacagcag
aaaaagaaaagttacaagaactctggaactatctgtgtcaagatgtgtcaggtagaaaca
gaacattcattcctggactatgtgatgggaggctgtcaaatcaacttcactgtgggcgtg
gacttcacaggctccaacggagacccttcctcacctgattctctgcactacctgagccca
acaggggtcaatgagtaccttacagcactgtggagcgtgggcagtgtggttcaggactat
gactcggacaagctgttcccagcatttggatttggggcccaggtaccccctgactggcag
gtttcccatgaatttgctttgaacttcaaccccagtaaccccttttgtgcaggcatccag
ggcattgtggatgcctaccgccaggccctgccccaagttcggctctatggtcccaccaac
tttgcacccatcatcaaccatgtggctaggtttgcagcccaggctgcaaatcagaggaat
gcttcgcaatacttcgtgctgttgctgctgaccgatggtgctgtgacagatgtggaggcc
acacgggaggctgtggttcgtgcttcctacctgcccatgtcggtgatcatagtgggtgtg
ggttgtgctgacttcgaggccatggagcagctggacgctgatggtggacccctgcacaca
cgctctggggaggcagccgctcgtgacatagtgcagtttgtgccctaccggcgtttccag
aatgctcctcgagaggcactggcgcagactgtacttgcagaagtacccacgcaactggtc
tcctacttcagggcccaaggttgggccccattcaagccacctccatctgcagccaagggc
cctgcacaggccccccaggcttag
DBGET
integrated database retrieval system
