Bubalus bubalis (water buffalo): 102412020
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Entry
102412020 CDS
T05912
Symbol
SEC24C
Name
(RefSeq) protein transport protein Sec24C isoform X1
KO
K14007
protein transport protein SEC24
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102412020 (SEC24C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbub04131
]
102412020 (SEC24C)
Membrane trafficking [BR:
bbub04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
102412020 (SEC24C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
102412020
NCBI-ProteinID:
XP_044798198
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Position
4:148796546..148818557
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AA seq
1117 aa
AA seq
DB search
MNVNQSAPPVPPFGQPQPVYPGYHQSSYGGQPGSTAAPTPYGAYNGPVPGYQQTPPPGVS
RAPASSGAPPASTAQGPCGQTAYGQFGQGDVQNGPSSGVQMQRLPGSQPFASAPLAPVVS
QPAVLQPYGPPPTSAQVTAQLAGMQISGAVAPAPPASGLGYGSPTSLASASGSFPNSGLY
GSYPQGQAPPLGQGHPGAQPPQRSVPPQASSFTPPASGGPRMPSMTGPLLPGQSFGGPPV
SQPNHVSSPPPQALPPGAQMTGPPGPPPPMHSSQQPGYQLQQNGSFGPARGPQSNYGSPY
PGAATFGSQPGPPQPLPPKRLDPDAIPSPQLNELPPQQKTRHRIDPDAIPSPIQVIEDDR
NNRGSEPFVTGVRGQVPPLVTTNFLVKDQGNASPRYIRCTSYNIPCTSDMAKQAQVPLAA
VIKPLARLPPEEASPYVVDHGESGPLRCNRCKAYMCPFMQFVEGGRRFQCCFCSCINDVP
PQYFQHLDHTGKRVDAYDRPELSLGSYEFLATVDYCKNNKFPIPPAFIFMIDVSYNAVRS
GLVRLLCEELKSLLDFLPREGGAEESAIRVGFVTYNKVLHFYNVKSSLAQPQMMVVSDVG
DMFVPLLDGFLVNVSESRAVITSLLDQIPEMFADTRETETVFAPVIQAGMEALKAAECAG
KLFLFHTSLPIAEAPGKLKNRDDRKLINTDKEKTLFQPQSGAYQTLAKECVAQGCCVDLF
LFPNQYVDVATLSVVPQLTGGSVYKYACFQVENDQERFLSDLRRDVQKVVGFDAVMRVRT
STGIRAVDFFGAFYMSNTTDVELAGLDGDKTVTVEFKHDDRLNEENGALLQCALLYTSCA
GQRRLRIHNLALNCCTQLADLYRNCETDTLINYMAKFAYRGVLSSPVKTVRDTLITQCAQ
ILACYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSEVLQPGAEVTTDDRAYVRQLVTS
MDVAETNVFFYPRLLPLTKSPIENTTEPPAVRASEERLSNGDIYLLENGLNLFLWVGASV
QQGVVQSLFGVSSFSQITSGLSVLPVLDNLLSKKVRGLIDNLRAQRSRYMKLIVVKQEDK
LEMLFKHFLVEDKSLSGGASYVDFLCHMHKEIRQLLS
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttaaccagtcagctccacctgtgccgccatttgggcagccccagcccgtctac
ccagggtatcatcaatccagctatggtgggcaaccagggtccacagctgcccccactccc
tatggagcttacaatggcccagtaccaggctatcagcaaacccctcccccaggtgtttca
agagccccagcttcttcaggggcacctccagcctcgacagcacagggcccttgtggccag
actgcatatggccagtttggccaaggagatgtgcagaatggaccaagctccggtgttcag
atgcagaggctccctgggtctcagccatttgcgtctgccccattggcccctgtggtcagt
cagccagctgtgcttcagccctatgggcctcccccgacaagtgcacaggtgactgctcag
ctggccggaatgcagatcagtggtgccgtggccccagctcctcccgcttcggggctgggc
tatggctcaccaacatcactggcctcagcctcaggaagtttccctaattctggtctgtat
ggctcctatcctcagggccaagctcctccccttggccagggtcatccaggggcccagcct
ccccagcgatctgtcccaccacaggcctccagcttcacaccccctgcctcagggggtcct
cggatgccttcgatgactggtccactcttgcctggacagagttttgggggcccccccgtg
agccagcccaaccatgtgtcctcacctcctcctcaagctctgccccctggtgcccaaatg
accgggcccccaggaccgccaccacctatgcactcctcccagcagccaggctatcagctg
cagcaaaatggttcctttggaccagcccggggccctcagtccaattatggaagtccctac
ccaggagcagccacttttggcagtcagcctgggcctcctcagccattgcctcctaagcgc
ctggaccctgatgccatcccgagccctcaactcaatgagctgcctcctcagcagaaaacc
aggcacagaatagaccctgatgccattcctagtccaattcaggttattgaagatgacagg
aacaaccggggttcagagccatttgttactggagtacggggccaggtgccacccttagtc
accaccaacttcctggtgaaagaccaaggaaatgcaagtccccggtacattcgatgcaca
tcgtataacatcccttgcacctctgacatggctaagcaggctcaggtgcccctggcagct
gtcatcaagccgctggcaaggctgcccccagaggaggcttcaccgtatgttgtcgaccat
ggggaatctggccctttgcgctgcaatcgttgcaaagcatacatgtgcccctttatgcag
ttcgttgagggagggagacgcttccagtgctgcttctgcagctgtatcaacgatgttcct
ccccagtattttcaacacctggatcataccggcaagcgtgtggatgcttatgaccgtcct
gagctgtccctgggctcttacgaattcttggccactgtagattactgcaagaacaataag
ttccccatccctcctgccttcatctttatgattgatgtctcctacaatgccgtcaggagt
ggtcttgtcaggctcctctgtgaggagctcaagtcactgttagactttttgcctagggag
ggcggggcagaagagtcagcaatccgcgttggctttgtcacctataataaggtgctccac
ttctacaatgtgaagagctcattggcccagccacagatgatggttgtatctgatgtgggt
gacatgtttgtgccactgctggatggcttcctggtcaatgtcagcgagtctcgggcagtc
atcaccagcttattggatcagattccagaaatgtttgcagacacaagggagacggagaca
gtatttgccccggtgattcaggctgggatggaggctctgaaggctgctgagtgtgcaggg
aagctctttctattccacacctccctgcccattgcagaggccccagggaaactgaagaac
agagacgacaggaagttgatcaacacagacaaggagaagactctgttccagcctcagtca
ggtgcctatcagaccctggccaaagagtgtgtggcccaaggctgctgcgtagacctcttc
ctcttccctaaccagtatgtggatgtggccaccctctctgttgtaccccagctcactggt
ggctctgtctataaatacgcttgctttcaggtggagaacgaccaggaacggttcctgagt
gacttgcgtcgggacgtccagaaggtcgttggctttgatgctgtgatgcgggtccggaca
agcactggtatccgtgctgtagatttctttggggctttctacatgagcaacaccacagat
gtggagctggctgggttggatggggacaagacggtgactgtggagttcaagcatgacgat
cggctcaacgaagagaatggagccctcctgcagtgtgccctgctctacaccagctgtgca
gggcagcgacggctccgcatccacaacctggctctcaactgctgcactcagctggctgat
ctgtaccgaaactgtgagactgacacgctcatcaactacatggccaagtttgcataccgg
ggggtcctaagcagccctgtgaagactgttcgtgacactctcatcactcagtgtgcccag
atcttggcctgttacagaaagaactgtgccagcccctcctctgcgggacagttgatcctt
cctgagtgcatgaagctcctccctgtttatctgaactgtgtattgaagagtgaggtcctg
cagcctggagctgaagtcactactgatgaccgtgcctacgtccggcagctggttacctcc
atggacgtggctgagaccaatgtcttcttctatcctcggctcctaccgttgacaaagtct
cccattgagaataccactgaaccaccagcagtccgagcatctgaagagcgtctaagcaat
ggggatatatatttgctggagaacgggctcaacctcttcctctgggtgggagcgagtgtc
cagcagggcgttgtccagagcctcttcggcgtctcgtccttcagtcagatcaccagtggc
ctgagtgttctgccagttctggataatctgctgtctaagaaggtgcgaggcctcattgat
aatttgagggcacagagatcgaggtacatgaagctcattgtggtgaaacaagaggacaag
ctggagatgctgttcaaacacttcctggtggaagacaagagcctgagcgggggagcatcc
tatgtggactttctctgtcacatgcacaaggagattcgacagcttctgagctag
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integrated database retrieval system
