KEGG   Bubalus bubalis (water buffalo): 102412043
Entry
102412043         CDS       T05912                                 
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein
  KO
K11988  sonic hedgehog
Organism
bbub  Bubalus bubalis (water buffalo)
Pathway
bbub04340  Hedgehog signaling pathway
bbub04360  Axon guidance
bbub05200  Pathways in cancer
bbub05205  Proteoglycans in cancer
bbub05217  Basal cell carcinoma
bbub05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:bbub00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    102412043 (SHH)
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    102412043 (SHH)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    102412043 (SHH)
   05205 Proteoglycans in cancer
    102412043 (SHH)
  09162 Cancer: specific types
   05226 Gastric cancer
    102412043 (SHH)
   05217 Basal cell carcinoma
    102412043 (SHH)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:bbub01002]
    102412043 (SHH)
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:bbub00536]
    102412043 (SHH)
Peptidases and inhibitors [BR:bbub01002]
 Cysteine peptidases
  Family C46: hedgehog family
   102412043 (SHH)
Glycosaminoglycan binding proteins [BR:bbub00536]
 Heparan sulfate / Heparin
  Morphogens
   102412043 (SHH)
SSDB
Motif
Pfam: HH_signal Hint Peptidase_M15_3 Vint Ribosomal_S6e
Other DBs
NCBI-GeneID: 102412043
NCBI-ProteinID: XP_025147718
LinkDB
Position
8:complement(116951735..116961752)
AA seq 464 aa
MDEMLLLARCLLVLLVSSLLMCSGLACGPGRGFGKRRNPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLRPGDRVLAADDEGRLLYSD
FLTFLDRDRGAKKVFYAIETREPRERLLLTAAHLLFVAPHNGSAAGAPEGAAAAAAAAAA
GGGAPGRRALFASRVRPGQHVYVVAERGGARRLLPAAVHSVTLREETAGAYAPLTAHGTI
LINRVLASCYAVIEEHSWAHGAFAPYRLAHALLAALAPGRTDRGGAGDGGGGGRVPPPTP
GAPGAADVPGAAGIHWYSELLYQIGTWLLDSEALHPLGMAVKSS
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggacgagatgctgctgctggcgagatgtctgctggtgctgctggtctcctcgctgttg
atgtgctcggggctggcgtgcggacccggcaggggatttggcaagaggcggaaccccaaa
aagctgacccctttagcctacaagcagtttatccccaacgtggcggagaagaccctaggg
gccagtggaagatatgaggggaagatcaccagaaactcagaacgatttaaggaactcacc
cccaattacaaccccgacatcatatttaaggatgaagaaaacactggagcggaccggctg
atgactcagagatgcaaggacaaactgaacgccttagccatctccgtgatgaaccagtgg
ccgggcgtgaagctgcgggtgaccgaaggctgggacgaggacggccaccactcggaagag
tcgctgcactacgagggccgcgcggtggacatcaccacctctgaccgcgaccgcagcaag
tacggcatgctggcgcgcctggccgtagaggccggcttcgactgggtctactacgagtcc
aaggcgcacatccactgctccgtgaaagcagagaactcggtggcggccaagtcgggcggc
tgcttcccgggctcggccacggtgcacttggagcagggcggaaccaagctggtgaaggac
ctgcggcccggggaccgcgtgctggcggccgacgacgagggccggctgctctacagcgac
ttcctcaccttcctggaccgcgaccgcggcgccaagaaggtcttctacgccattgagacg
cgggagcctcgcgagcgcctgctgctcaccgccgcgcacctgctcttcgtggcgccgcac
aacggctcagccgcgggggcgcccgagggggcggcggcggcggccgcggcggcggcggcg
ggcgggggcgcgccggggcgccgggcgctcttcgccagccgcgtgcggccgggccagcac
gtgtacgtggtggccgagcgcggcggggcccggcggctgctgcccgccgcggtgcacagc
gtgacgctgcgcgaggagacggcgggcgcctacgcgccgctgacggcgcacgggaccatc
ctcatcaaccgggtgctggcctcgtgctacgcggtcatcgaggagcacagctgggcgcac
ggggccttcgcgccctaccgtctggcgcacgcgctcctggccgcgctggcgcccgggcgc
acggaccgcggcggagccggcgacggcgggggcggcggccgcgtccccccgcccacgcct
ggggcgccgggggcggccgacgtgccgggcgccgcgggcatccattggtattcggagctg
ctctaccaaataggcacctggctgttggacagcgaggctttgcatccgctgggcatggcg
gtcaagtccagttga

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