Bubalus bubalis (water buffalo): 102412184
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Entry
102412184 CDS
T05912
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04140
Autophagy - animal
bbub04211
Longevity regulating pathway
bbub05010
Alzheimer disease
bbub05014
Amyotrophic lateral sclerosis
bbub05016
Huntington disease
bbub05017
Spinocerebellar ataxia
bbub05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102412184 (RB1CC1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
102412184 (RB1CC1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
102412184 (RB1CC1)
05014 Amyotrophic lateral sclerosis
102412184 (RB1CC1)
05016 Huntington disease
102412184 (RB1CC1)
05017 Spinocerebellar ataxia
102412184 (RB1CC1)
05022 Pathways of neurodegeneration - multiple diseases
102412184 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bbub01009
]
102412184 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbub04131
]
102412184 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
bbub03029
]
102412184 (RB1CC1)
Protein phosphatases and associated proteins [BR:
bbub01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102412184 (RB1CC1)
Membrane trafficking [BR:
bbub04131
]
Autophagy
Autophagosome formation proteins
ULK complex
102412184 (RB1CC1)
Mitochondrial biogenesis [BR:
bbub03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
102412184 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Lant_leader_dom
ubiquitin
Motif
Other DBs
NCBI-GeneID:
102412184
NCBI-ProteinID:
XP_006063462
LinkDB
All DBs
Position
15:60679310..60718914
Genome browser
AA seq
1589 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIHSKYKIAIQHQVLVVNGGECMAADRRVC
TYSAGTDTNPIFLFNKEMILSERLPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQ
SVEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRVDSLPEREGSEKAETKTSTEL
VLSPDTPAATSKPSFTSFHMSVEHVASDATDAESGKDVREPCPSPAQQDAAAIEAKEGDL
PFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFMAECRQTIANLDNQNMKA
IKGLEDRLYALDQMIASCGRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLM
IMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLE
RVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKQLYEAEKSKRESFGKL
FRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPL
LCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASASQTSPQSASSPRLESATG
ITTTTSPRTPPPLAVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEHTLHQASLDL
DSLAESPESDFMSAVNEFVIEEQLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTS
APGQEDPGDRASLSVQLGRCRASAHDSHLSIQTLKEDFCHFRTFVQKEQCDFANSLQCTA
VEIRSIIDKVKHSLEITLHEKHQKELESLKSEYEGRLATLVKESEENKSKITKLRGDLVC
LEEVLQNKDNEFALVKHEKEAIICLQKEKDQKLLEMECTVRTQHCEMEALRQSREVALED
LRKLHVENDEKLQLLRAELQRLEQSHLKELEDTLQVRHTQELEKAMSEHRLCLEKLEMEN
QQRIEQIQDSHAAVIQEKEQQVQELKLKVSDLSDMRCKLEVELALKEAETDEIKMLLEES
RTQEKKTLQSLFEKETEQLRAEISKLNQKIHDNNENYQVGLAELRTLMTVEKDQCISELI
SRHEEESDRLTTDLNKITSLYQQAFEIEKGLKEELAELQSKLDSELSALEKQKDEKISQQ
EDMYKAIIQKLEKDKEEFVMRQEQDREQLVQRLNCEKEAAIETARKEMHLEREAVEKELL
EKVKHLESQLAKSHAMESAREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVR
TSLIAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEE
KKRLEEEVSRLRGGAFVPSPGVAAAPELYGACAPEPPVEALDTFAEGRPDSAMETSTMSV
QENVHVLSEERQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGD
LVLIILDERHDNYVLFTVSPTLYFLHAESLPALDLRPGEGASGASRRPWVLGKVMEKEYC
QAKKAQNRFKVPLGTKFYRVKAVSWNKKV
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtatttctggtgaacactggaaccaccctgacatttgacactgaactt
acagtgcaaactgtggctgacctgaagcatgcgatccacagcaagtacaagatcgccatt
cagcaccaggtgctggtggtcaacgggggcgagtgcatggctgcagaccgcagggtgtgc
acctacagcgctgggacggacacaaatccaatttttctttttaacaaggaaatgatcttg
tctgagcgtctacctgctattcctaaaactaccttttcaacagaaaatgacatggaaata
aaagttgaagagtcccttatgatgcctgccgtttttcacactgtcgcttcaaggacacaa
cttgcagtggaaatgtatgaagttgccaagaaactctgctctttctgtgaaggtctggtc
catgatgaacatcttcagcaccaaggctgggctgcaattatggccaatctggaagattgc
tcaaattcctaccaaaagctgcttttcaaatttgaaagtatttattcaaattatctgcaa
tccgtagaagacatcaaattaaaacttactcatttaggaactgcggtttcagtcatggcc
aagattccgctgttggagtgcctcaccagacacagttacagggaatgtctggggagagtg
gattccttgcctgaacgcgaaggctcagaaaaggctgagacaaagacctccactgaactg
gtgctctctcctgatacgcctgcagcaacgagcaaaccctcgttcacctcatttcacatg
tctgtggagcacgtagcctcagacgccacagatgctgaaagtggaaaggatgtgagggag
ccttgtccaagccctgcccagcaggacgcagctgcaatagaggctaaagagggggacctg
cctttctttaatgtttctctgttggactggatcaacgtgcaggacaggcctaatgacgtc
gagtccttggtcaggaagtgctttgattccatgagcaggcttgatccccggatcattcga
ccctttatggccgaatgccgtcagactattgccaatctcgataatcagaacatgaaagcc
atcaagggcctggaagaccggctgtatgccctggaccagatgattgccagctgcggccga
ctggtcaatgagcagaaagaactcgctcagggatttttagctaatcagatgagagctgaa
aacttgaaggatgcatctgtgctacctgatttgtgcctgagtcatgcaaatcagttgatg
attatgttgcaaaaccatagaaagctgttggacattaaacagaagtgcaccactgccaaa
caggagctcgcaaataaccttcatgtcagactcaagtggtgttgctttgtgatgctccac
gcagatcaggatggagagaagttgcaggctttgctccgcctggttatcgagctcttagaa
agagtcaagatcgtagaagctctgagcacagttcctcagatgtactgcttagctgttgtt
gaggttgtcaggagaaaaatgttcataaaacactacagggagtgggctggtgctttagtc
aaggacggaaagcaattgtatgaggctgagaagtcaaaaagggaatcctttgggaaatta
tttaggaagtcttttctaagaaatcgtctgttcaggggattggactcctggcccccatcc
ttttgtacacagaagcctcgaaagtttgactgtgaacttccagatatttcattaaaagat
ttacagtttctgcaatcattttgtccttctgaagttcagccattcctcagggttccctta
ctttgtgactttgaacctctccaccagcatgtacttgctctgcataatttggtaaaagca
gcacaaagtttggatgaaatgtcacagaccattacagacctgctgagtgaacaaaaggcc
tctgcgagtcagacgtccccgcagtcggcttcctcgccccggctggaaagcgcgacagga
atcacaaccactacctcacccaggacaccgcctccactcgccgtgcaggatcccctgtgt
cctgcagtttgccccttagaggagctgtcaccagacagcattgatgcccacacgttcgac
tttgagactatcccccatccaaatatagagcatactctccaccaggcctccttagacttg
gattcactagcagaaagtcctgagtcggactttatgtctgcggtgaacgagtttgtcata
gaggagcagctatcgtctccaaaccccatcagtgacccgcagagcccagagatgatggtg
gagtccctctactcctctgtcatcaacgccattgacagcaggcggatgcaggacaccagt
gcccccggtcaggaggacccgggcgaccgcgcatccctcagtgtccagctggggaggtgc
cgcgcatccgcccacgactcgcacctcagcattcagaccctgaaggaggacttctgccac
ttccggacgttcgtgcagaaggaacagtgtgactttgccaattccttgcagtgtacagca
gtagaaataagaagcattatcgacaaagtaaagcactctttggaaataacactacatgaa
aaacatcaaaaagaactagagtctttaaaaagcgagtacgagggcaggctcgctaccctg
gtgaaggagagtgaagagaacaagagcaagatcaccaagctgcggggggacctggtatgc
ctggaggaggtgctgcagaataaggataatgagtttgctctggtcaagcacgagaaggaa
gccatcatctgcctgcagaaagagaaggaccagaagctgctcgagatggagtgcacagtg
cgcacccagcactgtgagatggaagcattgcggcagtcgcgtgaggttgccctggaggac
ttgaggaagctccacgtggagaatgatgagaagctccagctactgcgggcagagctccag
cgcctggagcagagtcatctgaaggagctggaggacacactgcaggtccgtcacacacag
gagttggagaaggccatgagcgagcacaggctctgcttggagaaactagaaatggaaaac
cagcagaggatcgagcagatccaagattctcatgctgcagtcatccaggagaaggagcag
caggtccaggagttaaagctcaaggtttcggatttgtcagacatgagatgtaagttagag
gtggagctggctctgaaggaagcagaaactgatgagataaaaatgttgctggaagaaagc
agaacccaggagaagaagaccttgcagtctctcttcgaaaaagagaccgaacagttgaga
gcagagatcagtaaactaaaccaaaagattcacgacaataatgaaaattatcaggtgggc
ttggcagagctgagaactttaatgacagttgaaaaagatcagtgcatttccgagttaatt
agtagacacgaagaagaatctgataggcttacaactgatttaaacaaaataacatcgttg
tatcagcaagcatttgaaatagaaaaaggcctgaaagaagaattagctgaactgcagagt
aaattggactcagaattgagtgctcttgaaaaacaaaaagatgagaaaatctcccagcaa
gaggatatgtacaaagctattatccagaagctagagaaagacaaagaggaatttgtcatg
agacaggaacaggaccgagaacagctagttcagaggcttaattgtgaaaaagaagctgct
attgagactgccagaaaagaaatgcacttggaaagagaagctgttgagaaagagttgtta
gagaaagttaaacatcttgagagtcaattagcaaaaagtcatgccatggaatctgccaga
gaagattcttcaagcctagttgctgaacttcaagaaaagctccaggaagaaaaagctaag
tttctagaacaacttgaagagcaggagaaaaggaagaatgaagagatgcagaatgttcga
acatctttgatcgctgagcagcagaccaattttaacactgttttaacgagagagaaaatg
aggaaagaaaacataatcaatgatctcagtgataagctcaagagcacaatgcagcagcag
gagcgggacaaagatttgatcgagtccctgtctgaggaccgcgcgcgtctgctggaggag
aagaagcgactggaggaggaagtcagccggctgcggggcggcgccttcgtgccctccccg
ggcgtggccgcagccccggagttgtacggggcctgtgcacctgagcccccagtggaggcc
ctggacacctttgctgaggggaggccagattcagccatggagaccagcacgatgtctgtc
caagaaaacgtccacgtgctctctgaagaaagacagcggataatgctgttggaacgaaca
ctacagttgaaagaagaagagaacaagcggttaaatcagagactgatgtctcagagcatg
tcctccgtatcctcaaggcattctgagaagatagccattagagatttccaggtgggcgac
ctggtgctcatcatcctggacgagcgccacgacaactatgtgctcttcacggtgagcccc
accctgtacttcctgcacgcggagtccctgcccgccctggacctcaggcccggagagggc
gcttcaggtgcgtcccgaagaccgtgggtccttggaaaagtgatggaaaaggagtactgc
caggccaaaaaggcacaaaacagatttaaagttcctttggggacaaagttttacagagtg
aaagctgtgtcatggaataagaaagtataa
DBGET
integrated database retrieval system
