Bubalus bubalis (water buffalo): 102412219
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Entry
102412219 CDS
T05912
Symbol
NELFCD
Name
(RefSeq) negative elongation factor C/D
KO
K15181
negative elongation factor C/D
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102412219 (NELFCD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbub03021
]
102412219 (NELFCD)
Transcription machinery [BR:
bbub03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
102412219 (NELFCD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TH1
Motif
Other DBs
NCBI-GeneID:
102412219
NCBI-ProteinID:
XP_006049112
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Position
14:26210310..26221207
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AA seq
589 aa
AA seq
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MAGAAPGAIMDEDYFGNAAEWGDEAEGGQEDDYGEGEDDAEVQQECLHKFSTRDYIMEPS
IFNTLKRYFQAGGSPENVIQLLSENYTAVAQTVNLLAEWLIQTGVEPVQVQETVENHLKS
LLIKHFDPRKADSIFTEEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISD
AGYQGEITSVSTACQQLEVFSRVLRTSLATILDGGEENLEKNLPEFAKMVCHGEHTYLFA
QALMSVLAQEEQGGSAVRRIAQEVQRFAQERGHDASQITLALGTAASYPRACQALGAMLS
KGALNPADITVLFKMFTSMDPPPVELIRVPAFLDLFMQSLFKPGARINQDHKHKYIHILA
YAASVVETWKKNKRVSINKDELKSTSKAVETVHNLCCNENKGASELVAELSTLYQCIRFP
VVAMGVLKWVDWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLVKLFETEH
SQLDVMEQLELKKTLLDRMVHLLSRGYVLPVVSYIRKCLEKLDTDISLIRHFVTEVLDVI
APPYTSDFVQLFLPILENDSIAGTIKTEGEHDPVTEFIAHCKSNFILVN
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggccgcgccgggcgccatcatggacgaggactacttcgggaatgcggccgag
tggggcgacgaggcggaaggcggccaggaggatgactatggagagggagaagatgacgcc
gaggtccagcaggagtgcctacataagttttctacacgggattatataatggagccctcc
atctttaacactctgaagaggtattttcaggcaggaggatctccagaaaacgttatccag
ctcctgtcagagaactacacggctgtggcacagaccgtcaacctgctggccgagtggctc
atccagacaggtgttgagccagtgcaggttcaggaaactgtggaaaatcaccttaagagt
ttactgatcaagcatttcgacccccgcaaagcagactctatctttactgaagaaggagag
acccctgcttggcttgaacaaatgattgcacacaccacctggagagaccttttttacaag
ctggctgaagcccacccagactgtttgatgcttaacttcactgttaagcttatttctgac
gctggataccaaggggagatcaccagtgtgtccacagcctgccagcagctggaggtgttt
tctagagtgctccgtacttctctagctaccattttggatggaggagaagaaaaccttgaa
aaaaatctccccgagtttgcaaagatggtgtgccacggggagcacacgtacctgttcgca
caggccctgatgtctgtgctggctcaggaggagcaggggggctcggctgtgcgcaggatt
gcacaagaggttcagcgcttcgcccaggagagaggccacgacgccagtcaaatcacactg
gcactgggcacagctgcctcctacccccgggcgtgccaggcccttggggccatgctgtcc
aagggagccctgaacccggccgacatcacagtcctgttcaagatgtttacgagcatggac
ccgccccctgttgaactcatccgggtacccgctttcctggacctgttcatgcagtcactc
tttaaacccggggccaggatcaaccaggaccacaagcacaagtatatccacattttggca
tatgcagcgagcgtggtggagacctggaagaagaacaagcgtgtcagcatcaataaagac
gagctgaagtccacgtcaaaagctgttgagactgttcacaacctgtgttgcaacgagaac
aagggggcgtcggagctcgtggctgagctgagcaccctttatcagtgcatccggtttcca
gtggtggccatgggggtgctgaagtgggtggactggactgtatcggagccgaggtacttc
cagctgcagactgaccacacgccagtgcacctggcgctgctggatgagatcagcacctgc
catcagctcctgcacccccaggtcctgcagctgctggtgaagctcttcgagacagagcac
tcgcagctggatgtgatggagcagcttgagttgaagaagactctcctggacaggatggtg
cacctgctgagccggggctacgtgcttcccgtggtcagttacatccgcaagtgtctggag
aagctggacactgacatttccctcattcgccactttgtgaccgaggtgctggatgtcatc
gcgcccccctacacctctgactttgtgcagcttttcctccccatcctggaaaacgacagc
attgctggcaccattaaaaccgaaggtgaacatgaccccgtgacggagttcatagctcac
tgcaagtctaacttcatcctggtgaactga
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