KEGG   Bubalus bubalis (water buffalo): 102412219
Entry
102412219         CDS       T05912                                 
Symbol
NELFCD
Name
(RefSeq) negative elongation factor C/D
  KO
K15181  negative elongation factor C/D
Organism
bbub  Bubalus bubalis (water buffalo)
Pathway
bbub03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:bbub00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    102412219 (NELFCD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bbub03021]
    102412219 (NELFCD)
Transcription machinery [BR:bbub03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     102412219 (NELFCD)
SSDB
Motif
Pfam: TH1
Other DBs
NCBI-GeneID: 102412219
NCBI-ProteinID: XP_006049112
LinkDB
Position
14:26210310..26221207
AA seq 589 aa
MAGAAPGAIMDEDYFGNAAEWGDEAEGGQEDDYGEGEDDAEVQQECLHKFSTRDYIMEPS
IFNTLKRYFQAGGSPENVIQLLSENYTAVAQTVNLLAEWLIQTGVEPVQVQETVENHLKS
LLIKHFDPRKADSIFTEEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISD
AGYQGEITSVSTACQQLEVFSRVLRTSLATILDGGEENLEKNLPEFAKMVCHGEHTYLFA
QALMSVLAQEEQGGSAVRRIAQEVQRFAQERGHDASQITLALGTAASYPRACQALGAMLS
KGALNPADITVLFKMFTSMDPPPVELIRVPAFLDLFMQSLFKPGARINQDHKHKYIHILA
YAASVVETWKKNKRVSINKDELKSTSKAVETVHNLCCNENKGASELVAELSTLYQCIRFP
VVAMGVLKWVDWTVSEPRYFQLQTDHTPVHLALLDEISTCHQLLHPQVLQLLVKLFETEH
SQLDVMEQLELKKTLLDRMVHLLSRGYVLPVVSYIRKCLEKLDTDISLIRHFVTEVLDVI
APPYTSDFVQLFLPILENDSIAGTIKTEGEHDPVTEFIAHCKSNFILVN
NT seq 1770 nt   +upstreamnt  +downstreamnt
atggcgggggccgcgccgggcgccatcatggacgaggactacttcgggaatgcggccgag
tggggcgacgaggcggaaggcggccaggaggatgactatggagagggagaagatgacgcc
gaggtccagcaggagtgcctacataagttttctacacgggattatataatggagccctcc
atctttaacactctgaagaggtattttcaggcaggaggatctccagaaaacgttatccag
ctcctgtcagagaactacacggctgtggcacagaccgtcaacctgctggccgagtggctc
atccagacaggtgttgagccagtgcaggttcaggaaactgtggaaaatcaccttaagagt
ttactgatcaagcatttcgacccccgcaaagcagactctatctttactgaagaaggagag
acccctgcttggcttgaacaaatgattgcacacaccacctggagagaccttttttacaag
ctggctgaagcccacccagactgtttgatgcttaacttcactgttaagcttatttctgac
gctggataccaaggggagatcaccagtgtgtccacagcctgccagcagctggaggtgttt
tctagagtgctccgtacttctctagctaccattttggatggaggagaagaaaaccttgaa
aaaaatctccccgagtttgcaaagatggtgtgccacggggagcacacgtacctgttcgca
caggccctgatgtctgtgctggctcaggaggagcaggggggctcggctgtgcgcaggatt
gcacaagaggttcagcgcttcgcccaggagagaggccacgacgccagtcaaatcacactg
gcactgggcacagctgcctcctacccccgggcgtgccaggcccttggggccatgctgtcc
aagggagccctgaacccggccgacatcacagtcctgttcaagatgtttacgagcatggac
ccgccccctgttgaactcatccgggtacccgctttcctggacctgttcatgcagtcactc
tttaaacccggggccaggatcaaccaggaccacaagcacaagtatatccacattttggca
tatgcagcgagcgtggtggagacctggaagaagaacaagcgtgtcagcatcaataaagac
gagctgaagtccacgtcaaaagctgttgagactgttcacaacctgtgttgcaacgagaac
aagggggcgtcggagctcgtggctgagctgagcaccctttatcagtgcatccggtttcca
gtggtggccatgggggtgctgaagtgggtggactggactgtatcggagccgaggtacttc
cagctgcagactgaccacacgccagtgcacctggcgctgctggatgagatcagcacctgc
catcagctcctgcacccccaggtcctgcagctgctggtgaagctcttcgagacagagcac
tcgcagctggatgtgatggagcagcttgagttgaagaagactctcctggacaggatggtg
cacctgctgagccggggctacgtgcttcccgtggtcagttacatccgcaagtgtctggag
aagctggacactgacatttccctcattcgccactttgtgaccgaggtgctggatgtcatc
gcgcccccctacacctctgactttgtgcagcttttcctccccatcctggaaaacgacagc
attgctggcaccattaaaaccgaaggtgaacatgaccccgtgacggagttcatagctcac
tgcaagtctaacttcatcctggtgaactga

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