Bubalus bubalis (water buffalo): 102412277
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Entry
102412277 CDS
T05912
Symbol
HCN4
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 isoform X1
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04024
cAMP signaling pathway
bbub04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
102412277 (HCN4)
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
102412277 (HCN4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bbub04040
]
102412277 (HCN4)
Ion channels [BR:
bbub04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
102412277 (HCN4)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
102412277
NCBI-ProteinID:
XP_044781282
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Position
11:82823015..82867052
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AA seq
1241 aa
AA seq
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MDKLPPSMRKRLYSLPQQVGAKAWIMDEEEDAEEEGAGGRQDPSRRSIRLRPLPSPSPSA
AAGCTEPRGAAHGAADGEGSARGAGKSSTNGDCRRFRGSLASLGSRGGGGAGSGGGSSHG
HLHDSAEERRLIAEGDASPGEDRTPPGLAAEPERSGASAQPAASPPPPPPQQPPQPVPAS
CEQTSVDTAIKVEGGAAAGDQILPEAEVRLGQAGFMQRQFGAMLQPGVNKFSLRMFGSQK
AVEREQERVKSAGFWIIHPYSDFRFYWDLTMLLLMVGNLIIIPVGITFFKDENTTPWIVF
NVVSDTFFLIDLVLNFRTGIVVEDNTEIILDPQRIKMKYLKSWFVVDFISSIPVDYIFLI
VETRIDSEVYKTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRI
VNLIGMMLLLCHWDGCLQFLVPMLQDFPDDCWVSINNMVNNSWGKQYSYALFKAMSHMLC
IGYGRQAPVGMSDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYM
SFHKLPPDTRQRIHDYYEHRYQGKMFDEESILGELSEPLREEIINFNCRKLVASMPLFAN
ADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMYFIQHGVVSVLTKGNKETKLADGSYF
GEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVLEEYPMMRRAFETVALDRLDRIGELP
AGREVAAGRGRGRATGFCLLPPRPKRLILFGGPGKKNSILLHKVQHDLNSGVFNYQENEI
IQQIVQHDREMAHCAHRVQAAASATPTPTPVIWTPLIQAPLQAAAATTSVAIALTHHPRL
PAAIFRPPPGPGLGGLGAGQTPRHLKRLQSLIPSALGSASPASSPSQVDTPSSSSFHIQQ
LAGFSAPAGLSPLLPSSSSSPPPGVGGSSPAPTPSTAAAAATAGFGHFHKALGGSLSSSD
SPLLTPLQPGARSPQASQPPPPLPGARGGLGLAEPFLPPPPSARSPSSCPGQLGQPPGEL
SPGLAAGQPSTPETPPRQPERLSLVAGSSGGASPVAFTPRGGPSPPGHSPGPPRTFPSAP
PRASGSHGSLLLPPASSPPPPQVPQRRGTPPLTPGRLTQDLKLISASQPALPQDGAQTLR
RASPHSSGESVAAFPLFPRGGGGSGGSGGSGGLGLPGRPYGAVPGQHVTLPRKTSSGSLP
PPLSLFGARATSSGGPPLTAAPQREPGARSEPVRSKLPSNL
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggacaagctgccgccgtccatgcgcaagcgactctacagccttccgcagcaggtgggg
gccaaggcgtggatcatggacgaggaagaggacgccgaggaggagggggctgggggccgc
caggaccccagccgcaggagcatccggctgcggccgctgccttcgccttcaccctcggct
gccgcgggctgcacggagccccggggcgcggcccacggggcggcagacggcgaggggtca
gcccgcggcgcgggcaagtccagcacgaacggcgactgcaggcgcttccgcgggagcctg
gcatcgctcggcagccggggcggcggcggcgcgggatcggggggcggcagcagtcacggg
cacctgcatgactccgcggaggagcggcggctcatcgccgagggcgacgcgtcccccggt
gaggacaggacgcccccaggcctggcggccgaacccgagcgctccggcgcctcggcgcaa
cctgcagcctcgccgccgccgccgccgccccagcagccgccgcagccggtccccgcctcc
tgcgagcagacctcggtggacaccgcgatcaaagtggagggaggcgcggccgctggagac
cagatcctccctgaggccgaggtgcgcctgggccaggccggcttcatgcagcgccagttc
ggggccatgctccagcccggggtcaacaaattctccctgagaatgttcggcagccagaag
gcggtagaacgcgagcaggagagggttaagtcggccgggttttggattatccacccctac
agcgacttcagattttactgggacctgaccatgctgctgctgatggtaggaaacctgatc
atcattcccgtgggcatcaccttcttcaaggatgagaacaccacaccatggattgtcttc
aatgtggtgtcggacacgttcttcctcatcgacttggtcctcaacttccgcacagggatc
gtggtggaggacaacacagagatcatccttgacccgcagcggattaagatgaagtaccta
aagagctggttcgtggtggatttcatctcctccatccctgtggactacatcttcctcatt
gtggagacacgcatcgactcggaggtctacaagactgcccgggccctgcgcattgtccgg
ttcaccaagatcctcagcctcctgcgcctcttgcgtctctcccgcctcattcgatatatt
caccagtgggaagagatctttcacatgacctacgacctggcgagtgctgtggtgcgcatc
gtcaacctcattggcatgatgctgctgctctgccactgggatggctgtctgcagttcctg
gtgcccatgctgcaggacttccccgacgactgctgggtgtccatcaacaatatggtgaac
aactcctggggaaagcagtactcctacgccctcttcaaggccatgagtcatatgctgtgc
atcgggtatggccggcaggccccggtgggcatgtcggacgtctggctcaccatgctcagc
atgattgtgggtgccacctgctacgccatgttcatcggccatgccactgccctcatccag
tccctggactcctcccggcgccagtaccaggagaagtacaagcaggtggagcagtacatg
tccttccacaagctcccgcctgacacccgccagcgcatccatgactactacgagcaccgc
taccagggcaagatgttcgatgaggagagcatcctgggcgagctgagtgagccactgcgg
gaggagatcatcaactttaactgcagaaagctggtggcctccatgccactgtttgccaac
gcggatcccaactttgtgacctccatgctgaccaagctgcgcttcgaggtcttccagcct
ggggactacatcatccgcgaaggcaccattggcaagaagatgtacttcattcagcacggg
gtggtcagtgtgctcaccaagggcaacaaggagaccaagctggcagatggctcttatttt
ggagaaatctgcctgctgacgcggggccggcgcacagccagcgtgagggctgacacctac
tgccgcctctactcgctgagcgtggacaacttcaatgaggtgctggaggagtaccccatg
atgcggcgggccttcgagacggtggcgctggaccgcctggaccgcatcggtgagctgcct
gccgggagggaggtggcggcggggcgggggcgggggcgggctacaggcttctgtctgctc
cctccccggcctaagcgcctgatcttgttcggtggtccaggcaagaaaaactccatcctc
ctccacaaagtccagcacgacctcaactcaggcgtcttcaactaccaggagaacgagatc
atccagcagatcgtgcagcacgacagggagatggcgcactgcgcgcatcgcgtccaggcc
gccgcctccgccacgccgacccccacgccggtcatctggaccccgctgatccaggcgccg
ctgcaggccgccgccgccaccacctccgtggccatcgccctcactcaccacccgcgcctg
ccggctgccatcttccggcctcccccggggcccgggctcggcggcctcggggccgggcag
acgccccggcacctgaagcggctgcagtctctgatcccatcggcgctgggctccgcctcg
cccgccagcagcccgtcccaggtggacacgccgtcttcctcctcctttcacatccaacaa
ctggctggattctccgcgccggccggtctgagcccgctcctcccctcgtccagctcctcc
ccgccgccaggggtcggcggctcctccccagcgcccacgccttccaccgccgcggccgcc
gccaccgcggggttcggccacttccacaaggcgctggggggctccctgtcctcgtccgac
tcgcccctgctcacccctctgcagccgggcgcccgctccccgcaggccagccagccgccg
cccccgctgccgggggcccggggaggcctgggactcgcggagcccttcctgccgcccccg
ccgtcggccaggtccccgtcgtcctgcccagggcagctgggccagcctcccggggagctg
tcccccgggctggccgccggccagccgagtacgccagagacacccccgcggcagcctgag
cggctgtccttggtggcagggtcctcagggggggcttctcctgtcgccttcaccccccga
ggagggcccagccctcctggccacagcccgggccctccaagaactttcccaagtgccccg
ccccgggcctctggctcccacggatccctgctcctgccccctgcatccagccccccgccg
ccccaggtcccccagcgccggggcacgccgcccctcacccctggtcgcctgacccaggac
ctcaagctcatctcagcctctcagccggccctcccccaggacggggcgcagactctccgc
agagcctccccgcactcctctggggagtcggtggcagccttcccgctctttcccagaggc
gggggcggcagcgggggcagcgggggcagcgggggcctcggtctccccgggaggccctat
ggtgccgtccctggccagcacgtcactctgcctcggaagacatcctcaggttctttgcca
ccccctctttctttatttggggcaagagccacctcttctggggggccccctctgactgct
gctccccagagggaacctggggccaggtctgagccggtgcgctccaaactgccgtccaac
ctataa
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