Bubalus bubalis (water buffalo): 102412394
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Entry
102412394 CDS
T05912
Symbol
VARS1
Name
(RefSeq) valine--tRNA ligase isoform X2
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
102412394 (VARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bbub01007
]
102412394 (VARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbub03016
]
102412394 (VARS1)
Enzymes [BR:
bbub01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
102412394 (VARS1)
Amino acid related enzymes [BR:
bbub01007
]
Aminoacyl-tRNA synthetase
Class I (U)
102412394 (VARS1)
Transfer RNA biogenesis [BR:
bbub03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
102412394 (VARS1)
Prokaryotic type
102412394 (VARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
GST_C_2
Jag_N
tRNA-synt_1e
Arc1p_N_like
Motif
Other DBs
NCBI-GeneID:
102412394
NCBI-ProteinID:
XP_025123202
LinkDB
All DBs
Position
2:complement(24892280..24904045)
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AA seq
1264 aa
AA seq
DB search
MSILYVSPHPDAFPSLRALIAARYGEAGEGPGWGGAHPRVCLQPPPASRTPFPPPRLPAL
EQGPGGLWVWGATAVSQLLWPAGLGGPGGSRPAVLVQQWVSYADTELIPAACGATLPALG
LRSSAQDPQAALAALGRALSPLEEWLRLHTYLAGEAPTLADLAAVTALLLPFHYVLDPSA
RRIWGNVTRWFITCVQQPEFRAVLGEVVLCSGARSLSQQPGSEVPAPPKTAAQLKKEAKK
REKLEKFQQKQKVQQQQPPPGEKKPKPEKREKRDPGVITYDLPTPPGEKKDVSGTMPDSY
SPQYVEAAWYPWWEQQGFFRPEYGRSSVSAPNPRGIFMMCIPPPNVTGSLHLGHALTNAI
QDSLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLWREQGLSRHQLGREAFLQEVWKWK
EEKGDRIYHQLKKLGSSLDWNRACFTMDPKLSAAVTEAFVRLHEEGIIYRSTRLVNWSCT
LNSAISDIEVDKKELTGRTLLSVPGYKEKVEFGVLVSFAYKVQGSDSNDEVVVATTRIET
MLGDVAVAVHPKDPRYQHLKGKSVIHPFVSRSLPIVFDDFVDMEFGTGAVKITPAHDQND
YEVGQRHGLEAVSIMDARGALVNVPPPFLGLPRFEARKAVLAALKEQGLFRGIEDNPMVV
PLCNRSKDVVEPLLRPQWYVRCGEMAQAASAAVTRGDLRILPEAHQRTWHTWMDNIRDWC
ISRQLWWGHRIPAYFITVNDPAVPPGEDPDGRYWVSGRTEAEAREKAAKEFGVSPDKISL
QQDEDVLDTWFSSGLFPFSILGWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKL
TGKLPFKEVYLHAIVRDAHGRKMSKSLGNVIDPLDVIQGVTLQGLHDQLLNSNLDPSEVE
KAKEGQKADFPTGIPECGTDALRFGLCAYTSQGRDINLDVNRILGYRHFCNKLWNATKFA
LRGLGKGFVPSPTSEPGGRESLVDRWIRSRVTEAVRLSNQGFQAYDFPAVTTAQYSFWLY
ELCDVYLECLKPVLNGVDQVAAECARQTLYTCLDVGLRLLSPFMPFVTEELFQRLPRRTP
QAPPSLCVTAYPEPLECSWKDPEAEAAFELALSITRAVRSLRADYNLTRIRPDCFLEVAD
EATGALASAVSGYVQTLASAGIVAVLALGASAPQGCAVALASDRCSVHLQLQGLVDPARE
LGKLQAKRDEAQRQAQRLQERRATSGYNVKVPLKVQEADEAKLQQTEAELRKVDEAIALF
QKML
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgtccattctgtacgtctctcctcaccccgatgccttccccagcctccgagccctcata
gctgctcgctacggggaagctggggagggtcctggatggggaggagcccacccccgcgtc
tgtctccagccgccccccgccagcaggactccttttcctccaccccgtctgccagccctg
gaacagggtcccggtgggctctgggtgtggggggccacggctgtgtcccagctgctgtgg
ccagcaggcctggggggtcccgggggtagtcggccagccgtcctggtccaacagtgggtc
agttacgctgacaccgagctaataccagctgcctgtggggctacgctgccggccttggga
ctccgaagctcggcccaagaccctcaggctgcactggcggccctgggcagagccctgagc
cccttggaagaatggcttcgactgcacacctacctggccggggaggccccgactctggct
gacctggcagctgtcacagctttgctgctgcctttccattatgtcctggacccctctgcc
cgccggatctggggtaatgtgactcgctggtttatcacatgtgttcagcagccagaattc
cgggccgtactgggagaggtggttctgtgttcaggggccaggtctctctcccaacagcca
ggctctgaggtccctgcacccccaaaaacggctgctcaactcaagaaagaggcaaagaaa
agggagaaactagagaaattccagcagaagcagaaggtccaacagcagcagccaccccct
ggggagaagaaaccaaaaccagagaagagggagaaacgggatcctggggtcattacctac
gatctcccgaccccacctggggaaaagaaagatgtcagtggtaccatgcctgactcctac
agccctcagtacgtggaggctgcctggtacccttggtgggagcagcagggcttcttcagg
cctgagtatgggcgttccagcgtgtcagcaccaaacccccggggcatcttcatgatgtgc
atcccaccccccaacgtgacaggctccctgcacctgggccatgcgctcaccaacgccatc
caggactcgctgacccgctggcaccgcatgcgcggagagaccaccctgtggaatcctggc
tgtgaccacgcgggcattgccacccaggtggtggtggagaagaaactctggcgcgagcag
gggctgagtcggcaccagctggggcgagaggctttcctgcaggaggtctggaagtggaag
gaggagaaaggtgaccggatttaccaccagctgaagaagcttggcagctccttggactgg
aatcgagcctgtttcaccatggatcctaaactgtcagcagccgtgacagaggcctttgta
cggctccacgaggagggaatcatttaccgcagcacccgccttgtcaactggtcctgcacc
ctcaactctgccatctccgacatcgaggtggataagaaggagctgacaggtcgtacactg
ctctccgtgcctggctacaaagagaaggtggagtttggggtccttgtctcctttgcttac
aaggtccaaggctcagacagcaacgacgaggtggtagtggcaaccactcggatcgagacg
atgctgggagatgtggccgtagctgtgcaccccaaagaccccagataccagcacctgaag
ggcaagagcgtgatccacccatttgtgtctcggagcctccccatcgtctttgatgacttt
gtggacatggagttcggcacaggtgcggtgaagatcacccccgcccacgaccagaatgac
tatgaggttgggcagcggcacgggctggaggccgtcagcattatggacgcccgcggggcc
ctcgtcaacgtgcccccacctttcctgggcctgcccaggtttgaggccagaaaggcggtg
ctggcagcgctcaaggagcaggggctgttccgtggcattgaggacaaccccatggtggtg
ccactttgcaaccgctccaaggacgtggtggagcctctgctgcggccgcagtggtacgtg
cgctgtggggagatggctcaggccgccagcgctgctgtgacacggggtgacctccgcatc
cttccggaggcccatcagcggacgtggcacacctggatggacaacatccgggactggtgt
atctcccggcagctgtggtggggccatcgcatcccagcctacttcatcactgtcaatgac
cccgccgtgcccccaggggaggaccctgacgggcggtactgggtgagcgggcgcactgag
gccgaggcccgcgagaaggcagccaaggagttcggcgtgtctcctgacaagatcagtctc
cagcaagatgaagatgtactggacacctggttctcctctggcctcttccccttctccatc
ctaggctggcccaaccagtcagaagatctaagtgtgttctacccggggacgctgctggag
acaggccatgacatcctcttcttctgggtggccaggatggtcatgctcggcctcaagctc
actggcaagctgcccttcaaagaggtctacctccatgccatcgtgcgggatgcccacggc
cggaagatgagcaagtctctaggcaacgtcattgaccccctggacgttatccagggggtc
accctgcagggtctccacgaccagttactgaacagcaacctggatcccagcgaggtggag
aaggcaaaagaggggcagaaggcagatttcccgacagggatccccgagtgtggcaccgat
gcactccggtttggactatgcgcctacacgtcccagggccgtgacatcaacctggatgtg
aaccggatattggggtaccgccatttctgcaacaagctctggaacgccaccaagtttgcc
ctccgtggccttgggaagggtttcgtgccctcacccacgtctgagcctggaggccgcgag
agcctggtggaccgctggatccgcagccgggtgaccgaagctgtgaggctcagcaaccaa
ggtttccaggcctacgacttcccggctgtcaccaccgcccagtacagcttctggctctat
gagctctgcgatgtctacctggagtgccttaagcctgtgctgaatggggtggaccaggtg
gcagccgagtgcgcccgccagaccctctacacctgcctggacgtgggcctgcgactactc
tcacccttcatgcccttcgtgaccgaggagctgttccaacggctgccccggcggacacca
caagctccccctagcctctgcgtcactgcctacccagagcccttggagtgctcctggaag
gaccctgaggcagaagctgccttcgagctggccctgagcatcactcgagccgtgcgctcc
ctgcgtgccgactacaaccttacccgcatccggcccgactgtttcctggaagtggctgac
gaggccacaggtgccctggcatcagcggtgtcaggctacgtgcagacactggccagcgcg
gggattgtggccgtcctggcgctgggggcttctgcaccccagggctgcgctgtggccctg
gcctctgaccgctgctccgtccacctgcagctgcaggggctagtagacccagcccgggag
ctgggcaaactgcaggccaagcgtgatgaggcgcagcggcaggcccagcgtctgcaggag
cgccgtgccacctcaggctacaatgtcaaggtgcccctcaaagtccaggaggcagatgaa
gccaagctccagcagacagaagcagagctcaggaaggttgatgaggccattgccctattt
cagaagatgctgtga
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integrated database retrieval system
