Bubalus bubalis (water buffalo): 102412406
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Entry
102412406 CDS
T05912
Symbol
EXOSC8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102412406 (EXOSC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102412406 (EXOSC8)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
102412406 (EXOSC8)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
102412406
NCBI-ProteinID:
XP_025118711
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All DBs
Position
13:64965156..64973855
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AA seq
276 aa
AA seq
DB search
MAAGFKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNVGSIGTADGSALVKLGNTTVIC
GIKAEFGAPPTDAPDKGYVVPNVDLSPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQ
KEDLCISSGKLAWVLYCDLICLNHDGNILDACTFALLAALKNVQLPEVTINEETALAEVN
LKKKSYLNIRTHPVATSFAVFDDTLLIVDPTEEEEHLATGTLTVVMDEEGRLCCLHKPGG
SGLTGAKLQDCMSRAVTRHKEVKELMDEVFKSMKPK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgggttcaaaactgtggaacctctggagtattacaggagatttctgaaagag
aattgccgtcctgatggaagagaacttggtgaattcagaaccacaactgtcaacgtaggt
tcgattggtaccgcagatggttctgctttagtgaagctgggaaatactacagtaatttgt
ggaattaaagcggaatttggagcaccaccaacagatgcccctgataaaggatatgttgtt
cctaacgtggatctatcacctctgtgttcctcgagatttcggtctggccctcctggagaa
gaggcccaagtggccagccagttcattgcagatgtcattgaaaattcacagataattcag
aaagaagacttatgcatctcttcaggaaagcttgcttgggttttgtactgtgatctcatt
tgcctcaaccatgatggaaacattttggatgcttgtacctttgctttgttagcagcttta
aaaaatgtacagttgcctgaagttactataaatgaagaaactgctttagcagaagttaat
ttaaagaagaaaagttatttgaatattagaactcatccagttgcaacttcctttgctgtg
tttgatgacactctgcttatagttgatcctactgaagaggaggaacatctggcaactgga
accctaacagttgtaatggacgaggaaggcaggctctgttgtcttcacaaaccaggtgga
agtggactgactggagctaaacttcaagactgtatgagccgagcagttacaagacacaaa
gaagtaaaagaactgatggatgaagtatttaagagtatgaaacccaaatga
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