Bubalus bubalis (water buffalo): 102412462
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Entry
102412462 CDS
T05912
Symbol
RNPS1
Name
(RefSeq) RNA-binding protein with serine-rich domain 1 isoform X2
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03013
Nucleocytoplasmic transport
bbub03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102412462 (RNPS1)
03015 mRNA surveillance pathway
102412462 (RNPS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102412462 (RNPS1)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102412462 (RNPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_5
RRM_3
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
102412462
NCBI-ProteinID:
XP_025130771
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Position
24:40404499..40413576
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AA seq
282 aa
AA seq
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MAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTS
SSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKP
PKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLSK
GYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLAPWPRPPPRRFSPPRRMLPPLPMW
RRSPPRMRRRSRSPRRRSPARRRSRSPGRRRHRSRSSSNSSR
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggcgccttctcccaccaaacgcaaagaccgctctgatgagaagtccaaggaccgttct
aaagataaaggggccactaaggagtcgagcgagaaggatcgcggcagggataagactcgg
aagaggcgcagcgcttccagcgggagcagcagcaccaggtcccgctccagctctacctcc
agctcaggttccagcaccagcacgggctccagcagcggctccagctcgtcttcggcttca
agccgctcgggaagttccagcacgtcgcgcagctccagctccagcagctcctcgggctcc
ccgagcccttctcggcgcagacatgacaacaggcggcgttcccgctccaagtccaaacca
cccaaaagagatgaaaaggaaaggaaaaggcggagcccttcccctaaacccaccaaagta
cacattgggcggctcaccaggaatgtgaccaaggatcacatcatggagatattctccacc
tatgggaaaattaaaatgattgacatgcctgtagaaaggatgcacccccatttgtctaaa
ggctatgcctatgtggagtttgagaatccagacgaggctgagaaggcgctgaagcacatg
gacggaggacaaatcgatggccaggagatcactgccaccgctgtgctggccccctggccc
cggccacccccccggagattcagccctcccaggaggatgctgccacctcttcctatgtgg
cgcaggtcacccccacggatgaggagaaggtcgcgctccccacgccgtcgttcgcccgcg
cggcgtcggtcccgttcgcctggacgccgccgccaccgcagccgctccagctccaactcc
tcccgatag
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