Bubalus bubalis (water buffalo): 102412464
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Entry
102412464 CDS
T05912
Symbol
EXOSC7
Name
(RefSeq) exosome complex component RRP42 isoform X5
KO
K12589
exosome complex component RRP42
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102412464 (EXOSC7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102412464 (EXOSC7)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
102412464 (EXOSC7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
102412464 (EXOSC7)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH_C
RNase_PH
Motif
Other DBs
NCBI-GeneID:
102412464
NCBI-ProteinID:
XP_044789736
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Position
21:complement(54058898..54086185)
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AA seq
244 aa
AA seq
DB search
MASVALSEAEKVYIVHGVQEDLRVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILV
GVKAEMGTPKLEKPNEGYLEFFVDWIPRVRVLEDEEGSKDIELSDDPYDCIQLSVENVPC
IVTLCKIGYRHVVDATLQEEACSLASLLVSVTSKGVVTCMRKVGKGSLDPESIFEMLEHL
CMAVTSKTLFRLASAWARCCMPPCRVFYTRRRAWGPRDRKSDSWADVHSSLQLPNLCLLL
FPGS
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggtggcgctgagcgaggcggagaaggtgtacattgtgcatggcgttcaggaa
gacctccgtgtggacggccgcggctgtgaagactaccgctgtgttgaagtggagaccgac
gtggtgtccaacaccagtgggtctgccagggtcaagctgggtcacactgacatattggtg
ggcgtgaaagcagaaatggggacgccgaagctggagaaaccaaacgaaggttacttggag
ttctttgttgactggataccaagagttcgtgttctggaagacgaagaagggtcgaaggac
attgaactgtctgatgacccctacgactgcatccagctaagcgtggagaatgtcccctgc
atcgtcaccctgtgcaaaattggctatcggcacgtggtggacgctactcttcaggaggag
gcctgctccttggccagtttgctggtgtctgtgaccagcaagggagtcgtgacatgcatg
aggaaggtgggaaagggcagcctggacccagagagcatcttcgagatgctggagcatctc
tgcatggcagtaacatcaaagactctattcagactggcaagcgcgtgggcaaggtgctgc
atgcctccctgcagagtattctacacaaggaggagagcctggggcccaagagacagaaag
tcggattcctgggctgatgtgcacagcagcctccaactgccgaacctttgtcttctcctt
ttccctggaagctga
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