Bubalus bubalis (water buffalo): 102412504
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Entry
102412504 CDS
T05912
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X6
KO
K08331
autophagy-related protein 13
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04136
Autophagy - other
bbub04140
Autophagy - animal
bbub04211
Longevity regulating pathway
bbub05010
Alzheimer disease
bbub05014
Amyotrophic lateral sclerosis
bbub05016
Huntington disease
bbub05017
Spinocerebellar ataxia
bbub05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102412504 (ATG13)
04136 Autophagy - other
102412504 (ATG13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
102412504 (ATG13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
102412504 (ATG13)
05014 Amyotrophic lateral sclerosis
102412504 (ATG13)
05016 Huntington disease
102412504 (ATG13)
05017 Spinocerebellar ataxia
102412504 (ATG13)
05022 Pathways of neurodegeneration - multiple diseases
102412504 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbub04131
]
102412504 (ATG13)
03029 Mitochondrial biogenesis [BR:
bbub03029
]
102412504 (ATG13)
Membrane trafficking [BR:
bbub04131
]
Autophagy
Autophagosome formation proteins
ULK complex
102412504 (ATG13)
Atg1 complex
102412504 (ATG13)
Mitochondrial biogenesis [BR:
bbub03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
102412504 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
102412504
NCBI-ProteinID:
XP_025121897
LinkDB
All DBs
Position
16:complement(8223871..8265762)
Genome browser
AA seq
466 aa
AA seq
DB search
METDLNSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIKVSYAVYNR
LSLLLKSLLAITRVTPAYRLSRKQGHEYVILYRIYFGDVQLNGLGEGFQTVRVGTVGTPV
GTITLSCAYRINLAFMSTRHFERTPPIMGIIIDHFVDRPYPSSSPMHPCNYRTAGEDTGV
ACPSVEDSQEVCATSFSTSPPSQLMVPGKEGGVPLGPSQPAHAAQADQERLATYTPSDGA
HCAATPSSSEDAETVSNSSEGRASPHDVLETIFVRKVGAFVNKPINQVTLTSLDIPFAMF
APKNLELEEADPMGSLHSDGSSGGSSGHTQDDFVMIDFKPAFSKDDILPMDLGTFYREFQ
NPPQLSSLSLDIGAQSMAEDLDSLPEKLAAHEKNVREFDAFVETLQ
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggaaactgatcttaattcccaggacagaaaggacctggacaagttcattaagtttttt
gccctcaagactgtccaagtgattgtccaggctcgactgggagagaagatttgtactcgt
tcgtcttcttccccaacgggttcagactggttcaatttagcaatcaaagacatcccagag
gttacacatgaagcaaagaaggccctggcagggcagctgcctgctgttgggaggtctatg
tgtgtggagatctcactcaagacttctgagggagattccatggagctagaaatctggtgt
ctggaaatgaatgaaaagtgtgataaagaaatcaaagtttcctatgctgtgtacaacaga
ttgtcgttgctgctgaagtctctgcttgctataactagggtgacaccagcttatagactc
tccagaaagcaagggcatgaatatgtcatcttatacagaatatattttggggacgttcag
ctgaatggcttaggggaaggtttccagacagttcgtgttgggacagtgggtacccctgtg
ggcaccatcactctttcctgtgcttacaggattaacttggcattcatgtccaccaggcac
tttgagaggaccccacctatcatgggcattattattgatcactttgtggaccgtccctat
cccagctcctcgcccatgcacccctgcaattacagaaccgccggcgaggacactggagta
gcgtgtccttctgtggaagactctcaggaagtgtgcgccacctccttttccacctcgcct
ccctcccagctaatggtccctgggaaggaaggtggggtaccccttggtcccagccagcct
gcccatgctgcccaggctgaccaggagagactggcaacctacaccccttctgatggggcc
cactgcgctgccacgccgtccagcagtgaggatgctgaaactgtatcaaacagcagcgag
ggacgggcctccccccacgatgtcttggagaccatctttgtccggaaagtgggggctttt
gtcaacaagcccatcaaccaggtgaccctgaccagtttggacataccctttgccatgttt
gctcccaagaacctggagctggaggaggcagatcccatgggcagcctgcactctgatggc
tccagcgggggcagcagcggccatacccaggacgacttcgtcatgatcgactttaaacca
gctttttctaaagacgacatccttccgatggacttggggaccttctatcgtgaatttcag
aacccgcctcagctgagcagcctctccctcgacatcggggcccagtccatggccgaggac
ttggactcactcccagagaagctggctgcgcacgagaagaatgtccgagaatttgatgcc
tttgtagaaaccctgcagtaa
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