Bubalus bubalis (water buffalo): 102412523
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Entry
102412523 CDS
T05912
Symbol
RNF17
Name
(RefSeq) RING finger protein 17 isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbub03036
]
102412523 (RNF17)
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Gene silencing
piRNA pathway
102412523 (RNF17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
zf-RING_UBOX
zf-RING_5
Exo84_C
Motif
Other DBs
NCBI-GeneID:
102412523
NCBI-ProteinID:
XP_025118552
LinkDB
All DBs
Position
13:53094193..53209278
Genome browser
AA seq
1648 aa
AA seq
DB search
MAAEALRARRPVSSCGQVETHGRARGATEALCSRCGRRAPRALVGHHHELQCGHAFCDLC
LLMTEEYSTITCPDCEVATTINTKQEYCPTDGCIKEDSFMEKLPPKKMRNCSQDFEKSAH
QQTVSLEHSASTPRTVLNPSAVIEESKTVEEIDEALKIAGQNFEQLSIAVKMLEHIHSQT
KEETVCLKEVLEKQFDQLFTSLDSRKKSLCEELVRNTDNYLSKIIVTKSYIEAKKSDLDA
AMKIARELKSAPSLRIYCDLNQIIRTLKLTFESDLSQVSSLKLRNSPKLNMNCSEIICMF
NRMGKIEFEDSTRCDPQESEMEKNGQKKYNCKKEFSYGGTYLSLEKKKADISVLTNEAPL
ASSQWENNDTHLATDFQPQKEVVAATLPKTIAALPRVGSSPDVIIEEIIEEEENLENYFV
ETPRYPTKPLQKKSSVSFGSKTGSPELVFVSHVIHPCHFYIRKYSQIKDATVLERKVNQF
CNKNLHLDPSDVLELGARIFINSIENGMWCRGTITELIPVGSESIRKLCSPTKFSVREVA
LIQIFMVDFGNSEVLIVAGVGDSHVRSEHIAKQHIVLNDLCLVLRKSEPYIEELLKDVQP
LAHPCSLKDIVPQNSSEGWGEEAKIEFLKMVNKKAVLMKVFKEEDGVLIVDLQKPPTNKI
SSDMPVSLRDALVFMELARFRSQTPRSHSEKNTTLHYPPPVLPKEMTDVSVMVCHINSPS
DFYLQLIESLDFLFLLKGIEEFYKSEDAENLEILCPVQDQACVAKFEDGVWYRAKVIGLP
GHREVEVKYVDFGNTAKITLKDMRKIKDEFLNPAEKAIKCKLAYIEPYKGTVQWSKNAKE
KFEEKTQDKFMTCSIIKILEDNVLLVELFDFLGAPGMIPTSINDQLVKEGLASYEVGYTL
KDNSKKHIEVWDPSPEEIISNEVNNLINPLFAKSLPSEDLQSLYNKELPVHICNIVSPEK
IYVQWLLTENLLHSLGEKMVAAYENSKWEPVKWENDMHCAVNIPDKNQWRRGQIIRMVTD
TLVEVLLYDVGVELVVNINCLRELQENLKTMGRLSLECSLVDIRPTGGSDKWTATACDCL
SLYLTGAVATIIIQENNTTWPLPVKIFCRDEKGERVDVSKYLIKKGLALRETRINKLDNS
HSLSQKSLEIPQEQGESVVTKCIKINSDPDKKAAFGISEPKVTEFREKILEPRTTGCYKP
PAIPNQKVFEAVVSCIGDDGTIFVVPKLSEFELIKMMDEIQSNLKCLGLLEPYFWKKGEA
CAVRGSDTMWYRGKVMEVIGSTIRVQYLDHGFTEKIPQCHLYPILLYPDTPQFCIPCQLY
NTIPVGNVWQPDAVELLQELLSKREVEIHIMELPENPWEKLSIHLYFDGMSLSYFLAHHK
YCTFEQSEEILKENPTDYNKKYEEERWEIRFEDLLLPETETPILPPYLSSSLPPPEELYA
VQVKHVVSPSEVYICLDSVESCSLFNQHSDTEDSGVGWESESESLEEALRRFNKNMETFP
PLTDFRTEMPCLAEYDDGLWYRAKIVSIKEFNPLAVLVQFVDYGSTEKLTVNRLRQIPLH
LMQYPARAIKVLLAGFKPPLRDVGKSRIPYCPKWSMEALWAMIDCLQGKQLYASSMAQVP
EQMVTLYEDKQYPIHMSLVEMGLADRDE
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgaggcgttgagggctaggcgccccgtgtcctcctgcgggcaggtggagacg
cacggccgggcccggggagccaccgaggccctgtgtagccggtgtggaagaagggcgccc
agagctctggtaggtcaccaccatgaacttcaatgtggacatgctttttgtgacctgtgc
ttattaatgactgaagaatacagcacaatcacatgccctgattgtgaggttgctacaact
ataaatacaaaacaagaatactgcccaacagatggatgtattaaagaagattcttttatg
gaaaaattgccgcctaaaaagatgaggaattgttctcaggactttgaaaagtctgctcat
caacaaactgttagtttagaacattcagcctccacacccaggactgttttgaacccatca
gctgtaatagaggaaagtaaaacggtggaagagattgatgaagcattgaagatagcaggc
caaaattttgaacaattaagtattgctgtaaaaatgcttgaacacatacacagtcaaaca
aaagaggagacagtctgtcttaaagaggttctggagaagcagtttgatcagcttttcact
tctcttgattccaggaagaagagcctgtgtgaagaattagtaagaaatacagacaattat
ttatcaaaaataatagtgactaaaagctacattgaagcaaaaaaaagtgatttggatgca
gctatgaagatagcaagagaattaaaatctgcaccttctctaaggatatattgtgacctg
aatcagattatccggactttgaagttaacatttgagagtgacttgtcacaagtcagctct
ctaaaactaaggaactctcccaagttgaatatgaattgcagtgagatcatctgtatgttc
aacagaatgggaaagattgaatttgaggattcaacacgatgtgatcctcaagaaagtgaa
atggaaaagaatggtcaaaagaaatacaattgtaaaaaggaattttcttatggtggtaca
tacctatcactagaaaagaaaaaggctgacatttctgtcctaactaatgaagccccactg
gcttcttcacaatgggaaaacaatgacacgcatttggcaactgacttccagccacagaaa
gaggttgttgcagcaacactccctaaaaccattgctgctctacctcgggtgggatctagc
cctgatgtgatcattgaagaaattattgaagaagaagaaaacctggaaaattattttgtt
gagacacctagatacccaacaaagcctcttcagaaaaagtcatctgtttcttttggatca
aaaacaggttctccagagctagtttttgtaagccatgtaatacatccttgccacttctac
attcggaagtattcacaaataaaagatgcaacagtgttggaaaggaaggtgaatcaattt
tgcaataagaatttacaccttgatccttcagatgttttggagctaggtgcaagaatattt
atcaacagtattgaaaatggaatgtggtgtcgaggaactattactgaattaattccagtg
ggaagtgaaagtattagaaaactttgtagtccaaccaaattctcagtccgtgaagttgca
ctaatacaaatattcatggtagattttggaaattctgaagtgctgattgttgcaggagtt
ggtgactctcatgtgagatcagagcacattgctaagcagcatatcgtactaaatgactta
tgtctggttctgagaaagtctgagccatatattgaagaactgctgaaagatgtccagcca
ctagcacatccatgctcattgaaagacattgttccacagaattcaagtgaaggctgggga
gaagaagctaaaatagaatttttgaaaatggtaaataagaaggctgttttaatgaaagtt
tttaaagaagaagatggtgtgcttattgtagatctgcaaaaaccaccaacaaataaaata
agcagtgatatgcctgtgtctcttagagatgcattagtttttatggaactagcaaggttt
agatctcaaacaccaagaagtcattctgaaaaaaatacgaccttacactatcctccacct
gttttgcctaaagaaatgactgatgtttcagttatggtttgtcatataaatagtccttct
gatttctatcttcagttgatagagagcctggattttttatttctattaaagggaattgag
gaattctataaaagtgaagatgcagaaaatctggaaatcctctgtccagttcaagatcaa
gcctgtgtcgctaaatttgaagatggagtttggtaccgagcaaaagttattggattgcct
ggacatcgtgaagttgaagttaaatatgtggactttggcaatacagcaaaaataacactt
aaagacatgcgtaagataaaggatgagtttctgaatcctgcagagaaggcaattaaatgt
aagctggcctatattgaaccatataaagggacagtgcagtggtcaaaaaatgctaaagaa
aaatttgaagaaaagactcaagataagtttatgacatgttccatcattaaaattctggaa
gataatgtgctgttagttgaactttttgattttcttggtgctcctggaatgattcccacc
agtattaatgaccagctagtcaaagagggcctagcatcttatgaagtaggatataccctc
aaagataattctaaaaagcatattgaagtgtgggatccttctccagaagaaattatttca
aatgaagtaaacaacttaataaatcctctgtttgcaaaatctctacctagtgaggatctg
cagtcactttataataaggaactgcctgtgcacatctgcaatatagtgtctcctgagaag
atctatgttcagtggttattaacagaaaacttgcttcatagtttaggagaaaagatggtt
gctgcttatgaaaactcaaaatgggaacctgttaaatgggaaaatgatatgcactgtgct
gttaatatcccagataaaaatcagtggcgaaggggccagatcatcagaatggttacagac
acattggtagaggtcttgctgtatgacgtgggtgttgaactagtagtgaacattaactgt
ttaagagaacttcaagaaaacctaaagacaatgggaagattatctttggaatgctctctt
gttgatataagaccaacaggtgggagtgacaagtggacagcgacagcctgtgactgcctc
tcattgtacctcactggagctgtagcaaccattatcatacaggaaaacaatacaacatgg
cccttacctgtgaaaattttctgcagagatgaaaaaggagagcgtgttgatgtttctaaa
tatttgattaaaaagggtttggctttgagagaaacaagaattaataaattagataacagc
cattcattatcccagaagtctttggaaatcccccaggaacaaggagaatcagtggttact
aaatgtattaagattaactctgaccctgacaagaaagctgcttttggtatcagtgaaccc
aaggtgactgaatttagggagaaaattctagagccaagaaccactggatgctataaacca
ccagctattcctaaccagaaagtatttgaggcagtagtcagctgcattggtgatgatgga
actatatttgtggtacctaaattatcagaatttgaactaataaaaatgatggatgaaatt
cagagtaatttaaaatgccttggtcttttggaaccttatttctggaaaaagggagaagct
tgtgcagtaaggggatcagatactatgtggtatcgaggcaaggtaatggaagtcatcggc
agcactatcagggtacaatatttagatcatggattcactgagaagattccacagtgtcat
ctttatcctattttactgtatcctgatacaccccaattttgtattccttgtcagctctat
aacaccatacctgttgggaatgtctggcaaccagatgcagtagaactccttcaggagctg
ctttcaaagagagaggtggaaattcacattatggaactaccagaaaatccatgggagaaa
ttatctattcatctctattttgatggaatgtcactttcttactttttggcacaccataaa
tattgtacttttgaacaatcggaggaaatattgaaggaaaatccaacagattacaataaa
aagtatgaggaagagagatgggaaataaggtttgaggatttgcttttgcctgaaacagag
actcctattttaccaccatatttgtcttcatctctgcctccccctgaggaactctatgct
gttcaagtaaagcacgttgtctcacccagtgaagtatatatttgccttgattctgtcgaa
agttgtagtttgtttaaccagcacagtgacacagaagacagtggagtcggctgggaatct
gagtcggagagcctcgaggaggcactgcggaggttcaataagaatatggagacattccct
cctctgacagacttcagaacagaaatgccttgccttgcagaatatgatgatggcttatgg
tatagagcaaagattgtttccattaaagaatttaatcctctagctgtcctggtgcaattt
gttgattatggatcaactgaaaagctgacagtaaacagactgcgtcaaatccctcttcat
cttatgcagtatccagcccgagccataaaggttctcttggcagggtttaaaccacccttg
agagacgtaggaaagtcaagaataccatattgtccgaagtggagcatggaagcattgtgg
gccatgatagactgtctacaaggaaaacagctttatgcttcttccatggctcaggtacca
gaacaaatggtgactttatacgaagataaacagtatccaattcatatgtcattagtagaa
atggggcttgcagaccgagatgaatga
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integrated database retrieval system
