Bubalus bubalis (water buffalo): 102412603
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Entry
102412603 CDS
T05912
Symbol
CSPG4
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
bbub00535
]
102412603 (CSPG4)
04091 Lectins [BR:
bbub04091
]
102412603 (CSPG4)
Proteoglycans [BR:
bbub00535
]
Cell surface proteoglycans
Others
102412603 (CSPG4)
Lectins [BR:
bbub04091
]
C-Type lectins
Others
102412603 (CSPG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
102412603
NCBI-ProteinID:
XP_006080753
LinkDB
All DBs
Position
20:complement(37193424..37229202)
Genome browser
AA seq
2319 aa
AA seq
DB search
MRWGPRLPLPALALALALTFAVLVGPASTASFFGENHLEVPVATALTDIDLQLEFSTAQP
EALLLLAAGPADYLLLQLYSGRLQVRLLLGQEEVRLQTPAETLLSDSVPHIVELTVSDSW
ALLSVDGLLNASAPVQGAPLEVPYGLFLGGTGSLDLPYLTRASRPLRGCLHTATLNGRSL
LRPLTADVPEGCAEEFSAGDDVAVGFSGPYSLAAFPAWGTRDEGTLEFTLTTRSQKAPLA
FQAGGRQGDFIYVDIFEGHLRAVVEKGQGTVLLHNSMPVADGQPHEVSVHVDAHRLEISV
DQYPTRTSNRGVLSYLEPRGNLLLGGLDAEASRHLQEHRLGLAVNISLLGCMEDLSVNGQ
RQGLREALLTRNMAAGCRLEEDEYEEDAYGPYEAFSTLAPEVWSAMELPVPCVPEPGLPP
VFANFTQLLTVSPLVVAEGGTAWLEWRHVQPTLDLNEAELRKSQVLFSVSRGARHGELEL
DIPGAQARKMFTLLDVVNRKARFAHDGSEDPSDQLVLEVSVTARGAVPSCLRRGQTYILP
IQVNPVNDPPRVIFPHGSLMVILEHTQKPLGPEVFQAYDPDSVCEGLTFQLLGAPAGLPV
ERRDQPGEPATEFSCRELEAGSLVYVHRGGPAPDLTFRVSDGLQASPPVTLKVVAVRPAI
QVLHNTGLRLAQGSAAPILPANLSVETNAVGQDVSVLFRVTGALRLGELQKQGAGGAEGT
EWRSTRAFHQRDVEQGRIRYLSTDPQHHAEDTVESVTLEVQVGQEALSNLTFPVMIQRAT
VRLLRLEPLHTQNTQQEALTTAHLEATLEEAGPNPTTFHYEVVQAPRKGNLQLQSMRLSD
GQSFTQDDLQAGRVTYGATARASEAVEDAFRFRVTAPPHFSPLYTFSIHIGGDPDAPVLT
NVLLSVPEGGKGVLSADHLFVKSLNSASYLYEVMERPRHGRLVWRDAQDEATMVTSFTNE
DLLHGRLVYQHDNSETMEDDIPFVATRQGEGSSDMAWEEVRGVFRVAIQPVNDHAPVQTI
SRIFHVARGGQRLLTTDDVAFSDADSGFADAQLVLTRKDLLFGSIVAVDEPSRPIYRFTQ
EDLRNRRVLFVHSGADRGWIQLQVSDGQHQTTALLEVQASEPYLRVAGGSGLVVPQGGQG
TIDTDVLPLDTNLDIRSGDEVHYQVTAGPRWGQLLRAGQPVTSFTQQDLLERAILYNHNG
SLSPRDTLAFSVEAGPVHTEATLQVTIAVEGPVAPLHLVQHKKIYVFQGEAAEIRRDLLE
AAQEAVPPADIVFSVKTPPSAGYLVMLSPGAVAAEPPSLDPVNRFSQEAVDAGRVLYLHS
RPEVWSDTFSLDVSSGLGAPLEGVRVELEVLPAAIPLEAQNFSVPEGGARTLAPPLLRIA
GSYFPRLPALHLQVLEPPRHGALQREEGPQDGSLSAFAWREVEQQLIRYVHDGSETLEDS
FVLVANASEMDRQSHPVVLTITILPVNDQPPILTTNTGLQMWEGATVPIPAEALRSTDSD
SGPEDLVYTLEQPSNGRVVLSMAPGTETHSFTQAQLDGGLVLFSHRGALDGGFRFSLSDG
EHSSAGHFFRVTAQKQLLLSLEGSRTLTVCPGSIQPLSSQSLRASSSAGTDPHHLLYRVL
RGPQLGRLFHTQRGSTGEALENFTQAEVYAGNILYEHEMPSEPFWEAHDALELQLSSPPA
PDMVATLAVTVTFEAACPQRPSRLWRNKGLWVSEGQRAEITTAALDAANLLASIPSPRRL
EHDVLFQITQFPTRGQLLVSEEPLHAGRPHFLQSELAAGQLVYAHGGGGTQQDGFRFRAH
LQGPAGASVAGPQTSEAFAITVRDVNERPPQPQASIPLRLTRGSRSPVSRAQLSVVDPDS
APGEIEYEVQRAPHNGFLSLAGASPGPVTRFTQADVDAGRLAFVANGSSVVGVFQLSVSD
GASPPLLMSLAVDVLPSAIEVQLRAPLEVPQALGRSSLSRQQLRVVSDREEPDAAYHLTQ
GPRYGHLLVGGQPATAFSQLQVDQGDVVFAFTNFSSSQDQFSILALARGANASATVNVTV
RALLHVWAGGPWPQGATLRLDPTVLDAGELANRTGSVPRFRLLAGPRHGRVVRVPRARTE
PRGGQLVEQFTQQDLEDGRLGLEVGRPEGSSPGPTGDSLTLELWARGVPPAVASLDFATE
PFNAARTYRVALLSLPEAARTEAREPESSTPTGGPSPVTPSPVPPVASGGFLGFLEANMF
SIIIPICLVLLLLALIVPLLFYLRKRNKTGKHNVQVLTAKPRNGLASDAETFRKVDPGQA
VPLMAVPGQGPPPGGQPDPELLQFCRTANPALKNGQYWV
NT seq
6960 nt
NT seq
+upstream
nt +downstream
nt
atgcgctggggtccccggctcccgctcccagccctcgccctggccctagctctgaccttc
gctgtgttggtgggaccagcatccacagcctccttcttcggagagaaccacttggaggtc
cccgtggccacggctctgaccgacatagacctacagctggagttttccacggcgcagccc
gaggccctgcttctcctggcggcaggcccggctgactacctactcctgcagctctactcc
ggacgcctgcaggtccgacttctcctgggccaggaagaggtgaggctgcagaccccagca
gagacgctgctgagcgactctgtcccccacatcgtggagctgaccgtgtcagacagctgg
gccttgctgtcagtcgacgggctcctgaatgcctcagccccagtccagggcgctcccctg
gaggtcccctatgggctcttcctggggggcacggggagccttgacctgccctacctgacg
agagccagccgacccctgcggggttgcctccacacggccaccctcaatggccgcagcctc
ctccggccgctgacggcagatgtgcctgagggctgtgccgaggagttctctgctggtgac
gatgtggccgtgggcttctctgggccctactcgctggccgccttccctgcctggggcact
cgggacgaaggcaccctggagtttacactcaccacacggagccagaaggcacccctggcc
ttccaggctgggggccggcagggggacttcatctatgtcgatatatttgagggccacctg
cgagctgtggtagagaagggtcagggcaccgtactgctccacaacagcatgcctgtggct
gatgggcagccccacgaggtcagcgtccacgtggatgctcaccggctggaaatctccgtg
gaccagtaccccacacggacttccaaccgtggggtcctcagctacctggagccacgaggc
aatctcctcctcggggggctggatgccgaggcctctcgccacctccaggagcaccgcctg
ggcctggctgtcaacatctccctcctgggctgcatggaggatctcagcgtcaacggtcag
aggcaggggctccgggaagccttgctgacccgcaacatggcagccggctgcaggctggag
gaagacgagtacgaggaggacgcctacggcccgtatgaagctttctccaccctggcaccc
gaggtgtggtcggccatggagctgcccgtgccctgcgtgccagaaccggggctgcccccg
gtctttgccaatttcacccagctgctgaccgtcagcccgctggtggtggctgagggcggc
acagcctggctggagtggcggcacgtgcagcccacactggacctgaatgaggccgagctt
cgcaagtcccaggtgctgttcagcgtgagccgcggggcccgccacggcgagctggagctg
gacattccgggcgcccaggcacggaagatgttcacccttctggacgtggtgaaccgcaag
gcccgctttgcccacgatggctccgaggacccctccgaccagctggtgctcgaggtgtca
gtgacagctcggggggccgtgccttcctgccttcgcaggggccaaacatacatcctgccc
attcaggtgaaccctgtcaatgacccacctcgcgtcatcttcccgcacggcagcctcatg
gtgatcctggaacacactcagaagcccctggggccagaggtcttccaggcctacgaccca
gactccgtttgcgagggcctcaccttccagctcctcggtgcccccgccggcctacccgtg
gagcgccgagaccagcctggggagccagcaaccgagttttcctgccgggagctggaggca
ggcagcctagtctacgtccatcgcggcgggcccgccccggacctgacattccgggtcagc
gatgggctgcaagccagccccccagtcacgctgaaggtggtggccgtcaggccagccatt
caagtcctccacaacacggggctgcgcctggcccagggctccgctgcacccatcttgccc
gccaacctgtcggtggagaccaatgccgtggggcaggatgtgagcgtgctgtttcgagtc
accggggccctgcggttgggggagctgcagaagcagggggcaggcggggcagagggcacc
gagtggcgatctacacgggccttccaccagcgggacgtggagcagggccgcataaggtac
ctgagcaccgacccgcagcaccacgccgaggacacagtggagagcgtgaccctggaggtg
caggtgggccaggaggccttgagcaatctgaccttcccagtgatgatccagagagccacc
gtgcggctgctgcggctggagccactgcacacccagaacacccagcaggaggccctcacc
acagcccacctggaggccaccctggaggaggcaggcccaaaccccaccactttccactat
gaggtggttcaggcccccaggaagggcaatcttcagcttcagagcatgcggctgtcagac
ggccagagcttcacccaggatgacctgcaggctggccgggtgacttacggggccacagct
cgtgcctcagaggcagtcgaggacgccttccgtttccgcgtcacagccccgccgcacttc
tccccgctgtacaccttctccatccacattggcggtgatccggacgctcccgtcctcacc
aatgtcctcctctcggtgcccgagggcgggaagggcgtcctctctgctgaccacctcttt
gtcaagagtctcaacagcgccagctatctctacgaggtcatggagcgaccccgccatggc
aggttggtgtggcgagacgcacaggacgaggccaccatggtgacatccttcaccaatgag
gacctgctgcacggccggctggtctaccagcatgacaactccgagaccatggaagatgac
atcccctttgtggctacccgccagggcgagggcagcagtgacatggcctgggaggaggta
cggggtgtcttccgcgtggccatccagcccgtgaatgaccacgctcctgtgcagaccatc
agccgcatcttccacgtggctcgtggcgggcagcggctgctgaccacggatgatgtggcc
ttcagcgatgctgactccggctttgcagatgctcagctggtgctgacccgcaaggacctc
ctcttcggcagtatcgtagctgtggatgagccctctcggcccatataccgcttcacccag
gaggatctcaggaaccggcgggtcttgtttgtacactcaggggccgaccgcggctggatc
cagctgcaggtgtccgacgggcagcaccagaccactgcgctgctcgaagtgcaggcctcg
gaaccctacctccgtgtggccggtggctctggcctggtggtccctcaaggaggccagggc
accattgacacagacgtgctccccctggacaccaatctagatatccgcagtggtgatgag
gtccactaccaggtcacagccggtccacgctgggggcagctgctccgggccggccagccg
gtcaccagcttcacccagcaggacctgctggagagggccattctctacaatcacaacggc
agcctcagtccccgtgataccctggccttttctgtggaggcagggcctgtgcacacagaa
gccaccctgcaagtgaccattgccgtcgaggggccagtggcccccctgcacctcgtccag
cacaagaagatctacgtcttccagggagaggcagctgagatcagaagggacctgctggag
gcagcccaggaggcagtgccaccagcggatattgtgttctcagtgaagaccccgccgagc
gccggctacctggtgatgctgtcgcctggcgccgtggcagctgagccgcccagcctggac
cccgtgaaccgtttctcccaggaggcagtggatgcgggcagggtcctgtacctgcactcc
cgccctgaggtctggagcgacaccttctccctggatgtgtcctcaggcctgggtgctccc
ctcgagggcgtccgcgtggagctggaggtgctgcccgccgccatccccctggaggcacag
aacttcagtgtccctgagggcggggcccgcaccctggccccgcctctgctccgcatcgcg
gggtcctacttccccaggctgccggccctccacctgcaggtgctggagccgccccggcat
ggggccctgcagagagaagagggacctcaagacgggagcctcagcgccttcgcctggaga
gaggtggaacagcagctgatccgctacgtgcatgatgggagtgagacactggaagacagt
tttgtcctggtggccaacgcctcagagatggaccgccagagccaccccgtggtcctcacc
atcaccatcctgcctgtcaatgaccagccccccatcctcaccacaaacacaggcctgcag
atgtgggagggggccacggtgcccatcccagcggaggcccttaggagcacagacagcgac
tccggacccgaggacctggtctacaccctggagcagcccagcaacggacgggtggtgctg
agtatggcgccgggcaccgagacccacagcttcacccaggcccagctcgacggcgggctc
gtgctcttctcacacagaggagccctggacggaggcttccgcttcagcctgtctgacggc
gagcacagctccgcgggacacttcttccgggtgacggcccagaagcagctgctcctctcc
ctggagggcagccggacgctgaccgtctgcccagggtccatccagccgctcagcagccag
agcctgagagccagttccagtgcgggaactgacccccaccacctgctctaccgggtgttg
cggggcccccagcttggccggctcttccacacccagcggggcagcactggggaggccctg
gagaacttcactcaggcagaggtatatgctgggaacattctgtatgagcacgagatgcct
tccgagcccttctgggaggctcatgacgccctggagctccagctgtcctcaccccctgcc
cccgacatggtcgccacccttgccgtgaccgtgactttcgaggctgcctgtccccagcgc
cccagccgcctctggaggaacaaaggtctctgggtctccgaaggccagagggctgagatc
accaccgcagccctcgacgccgccaacctcctggccagcatcccatcgccccggcgcctg
gagcacgatgtgcttttccagatcacgcagttccccacgcggggccagctgttggtgtcc
gaggagcccctccacgccgggcggccccacttcctgcagtctgagctggccgcagggcag
ctggtgtacgcccacggaggcgggggcacccagcaggatggcttccgtttccgcgcccac
ctccaggggccagcgggggcctccgtggcgggaccacagacctcagaggccttcgccatc
acagtgcgcgatgtgaatgagcggccgccgcagcctcaggcctccatcccgctccggctc
acccggggctcccgtagccctgtctcccgggcccagctgagcgtggtggacccagactcc
gctcccggagagattgagtatgaggtgcagcgggccccccacaacggcttcctgagcctg
gcgggggccagcccggggccggtgacccggttcacgcaggctgacgtggatgcaggacgc
ctggcattcgtggccaacgggagcagtgtggtgggcgtgttccagctgagcgtgtccgac
ggggccagcccgcccctgctcatgtccctggcggtggacgtccttccctcagccattgag
gtgcagctgcgggcacccctggaggtgccccaagctttagggcgctcctccctgagccgg
cagcagctccgagtggtttccgatcgggaggagccggacgcagcctaccacctcacccag
gggccccgttacgggcatctgttggtgggcgggcagcctgccacagccttcagccagctc
caggtagaccagggagacgtggtctttgccttcaccaacttctcctcctctcaggatcag
ttcagcatcctggcactggccaggggtgccaacgcatctgccacggtgaatgtcaccgtg
agggctctgctgcatgtgtgggcaggtgggccgtggccccagggtgccaccctgcgcctg
gaccccactgtcttagatgcgggagagctggccaaccgcacgggcagtgtgccgcgtttc
cggctcttggcaggaccccggcacggccgcgtggtacgagtgccccgggccaggacagag
ccacggggcggccagcttgtggagcagttcacccagcaggaccttgaggatggacggctg
gggctggaggtgggaaggccagagggtagctctcccggccccacgggtgacagtctcact
ctggagctgtgggcaaggggtgtccctcccgctgtggcctcgctggactttgccacggag
cctttcaacgcagcccggacctacagagtggccctgctcagtctgcctgaggctgctcgg
accgaagccagggagccagagagcagcacccccacgggcgggccaagcccagtgaccccc
agccccgtgccccctgtggccagcgggggcttcctgggcttcctggaggccaacatgttc
agcatcatcatccccatctgcctagtcctcctgctcctggcgctcatcgtgcctctgctc
ttctacctccgcaaacgcaacaagacaggcaagcacaacgtccaggtgctgaccgccaag
ccccgaaacggcctggccagtgacgccgagaccttccgcaaggtggatccaggccaggcc
gtcccactgatggccgtgcctggccaggggcccccaccggggggccagcctgaccccgag
ctgctgcagttctgccggacagccaaccctgccctcaagaacggccagtactgggtgtga
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