Bubalus bubalis (water buffalo): 102412680
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Entry
102412680 CDS
T05912
Symbol
CLASP1
Name
(RefSeq) CLIP-associating protein 1 isoform X17
KO
K16578
CLIP-associating protein 1/2
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbub03036
]
102412680 (CLASP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bbub04812
]
102412680 (CLASP1)
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
102412680 (CLASP1)
Cytoskeleton proteins [BR:
bbub04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
102412680 (CLASP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
HEAT
CEP104-like_TOG
HEAT_EZ
TOR1L1_N
Cnd1
Sec7-like_HUS
HEAT_2
HEAT_DAAF5
MMS19_N
ParcG
TAN
MMS19_C
KH_DEAH11_1st
Motif
Other DBs
NCBI-GeneID:
102412680
NCBI-ProteinID:
XP_044792479
LinkDB
All DBs
Position
2:complement(125299004..125567957)
Genome browser
AA seq
1477 aa
AA seq
DB search
MEPRMEACLAQVLQKDVGKRLQVGQELIDYFSDKQKSADLEHDQTMLDKLVDGLATSWVN
SSNYKVVLLGMDILSALVTRLQDRFKAQIGTVLPSLIDRLGDAKDSVREQDQALLLKIMD
QAANPQYVWDRMLGGFKHKNFRTREGTCLCLVATLNASGAHTLTLSKIVPHICNLLGDPN
SQVRDAAINSLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGNMIQSANDKN
FDDEDSVDGNRPSSASSTSSKAPASSRRNVGMGTTRRLGSSSLGSKSSAAKEGAGAVDEE
DFIKAFDDVPVVQIYSSRDLEESINKIREILSDDKHDWEQRVNALKKIRSLLLAGAAEYD
NFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTIFNLIPN
SAKIMATSGVVAVRLIIRHTHIPRLIPVITSNCTSKSVAVRRRCFEFLDLLLQEWQTHSL
ERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLYHTLESSYQKALQTHL
KSSDSVVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVSTKSASTAGSLQRSRS
DIDVNAAASAKSKISSAAGTAPFSSAAALPPGSYASLGRIRTRRQSSGSATNVASTPSDS
RGRSRAKVVSQSQPGSRSSSPGKLLGSGYSGLTGGSSRGPPVTPSSEKRSKIPRSQGCSR
ETSPNRIGLDRFGLGQAGRIPGSVNAMRVLSTSTDLEAAVADALKKPVRRRYEPYGMYSD
DDANSDASSVCSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWAERKEGLLGLQNLLK
SQRTLSRVELKRLCEIFTRMFADPHSKIADSEHEDKEGNLFTSEGSCTRVFSMFLETLVD
FIIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFI
VDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAA
QIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNHLKNSSNTSVGSPSNTIGRTPSRH
PSSRTSPLTSPTNCSHGGLSPSMLDYDTENLNSEEIYSSLRGVTEAIEKFSFRSQEDLNE
PIKRDGRKDCDIVSRDGGIASPAIEGRGGSEVVEGGRTALDNKTSLLNTQPPRAFPGPRA
RDYSPYPYSDTISAYDKTALKEAVFDDDMEQLRDVPIDHSDLVADLLKELSNHNERVEER
KGALLELLKITREDSLGVWEEHFKTILLLLLETLGDKDHSIRALALRVLREILRNQPARF
KNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIVQTADYPINLA
AIKMQTKVVERIAKESLLQLLADIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKP
HLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS
NT seq
4434 nt
NT seq
+upstream
nt +downstream
nt
atggagcctcgcatggaggcctgcctggcacaggtgctgcagaaggatgtggggaaacga
ctgcaggttggccaagaactgatagactatttctcagacaaacagaagtctgccgacctc
gagcatgaccagaccatgttagacaaacttgtggatggactcgctacctcttgggtgaac
tctagcaattataaggtggttctcctgggcatggacatcctgtccgcgctggtcacccgg
ctgcaggatcggttcaaggcgcagatcggtacagtgctgccgagtttaatagacagactg
ggagatgctaaagactctgtgagggagcaagaccaggccctgctgctgaagatcatggat
caggctgctaatccccagtacgtgtgggaccggatgctgggcggcttcaagcacaagaac
tttcgcacccgggaaggcacgtgtctctgcctcgtggccaccctcaacgcctctggagct
catacgttaacactaagcaagatcgtgccacatatatgtaacctactaggagatcccaac
agccaggttcgagatgcagcaataaacagcttagtggaaatttacagacatgtaggagaa
cgtgtgagggcagatctcagtaaaaaaggattgccacagtcccggttgaatgtaattttt
acaaaatttgatgaagtccaaaaatctggaaacatgatacagtctgcgaatgataaaaat
tttgatgatgaagattctgtggatggtaatagaccttcttccgccagctctacgtcgtcc
aaagctccagcaagctcacggagaaacgttggaatggggaccacccgtaggctcggctcc
tcctctcttggatccaagtcttcagctgcaaaagaaggagctggtgctgttgatgaagag
gattttattaaagcatttgacgatgtgcctgtagtccagatttattccagccgagacctt
gaggagtccataaacaagattagggaaatattatctgatgacaagcatgattgggagcaa
agagtaaatgctctaaaaaagattagatctttactcttggctggtgctgccgagtatgat
aacttcttccagcacttacggcttttggacggagcctttaaactgtccgctaaggatcta
cggtctcaggtagtgcgggaggcttgtatcacgctggggcatctgtcatcagtgctgggg
aataagtttgaccatggagctgaagccattatgccaactatctttaatttaattccaaat
agtgccaaaattatggccacctctggtgttgtagctgttaggttaatcatccggcacaca
cacatccctaggctaatacctgtcataacaagcaactgtacctccaagtctgttgcagtt
agaaggcgctgctttgaatttttagatctacttttacaagaatggcagacacattcattg
gaacgacacatatcagtattagctgaaacgataaagaagggaatacatgatgctgattca
gaagcaaggatagaagccagaaagtgttactggggtttccacagtcacttcagcagggaa
gcagagcacctgtaccacacgctggagtcctcctaccagaaggccctgcagacccaccta
aagagctcggacagcgtggtgtcactgccgcagtcagaccgctcatcctccagctcccag
gagagtctcaatcggccgctctcagccaaaagaagtcctactggcagtaccacctccaga
gcttccacggtcagcaccaagtccgcatccaccgcggggtccctgcagcggtctcgaagc
gacatcgacgtgaatgcagctgccagcgccaaatccaagatctcctcggctgccggcaca
gcacccttcagctcggcggcggccttacctccgggctcgtatgcgtccttaggtcggatc
cgcacgcgacggcagagctctgggagtgccaccaacgtcgcctctacaccttccgacagt
cggggccgcagtcgcgccaaagtggtctcgcagtcccagcctggcagccgatccagttcc
ccagggaaattgttgggaagtggttatagtggccttactgggggttcctcaagaggcccg
cctgtgacaccctcttcagaaaaacgaagcaagattcccaggagtcagggatgtagtcga
gaaacaagtccaaaccgcataggattagaccgctttgggctcggccaggcaggaagaatt
cctggttctgtgaatgccatgcgggttctgagcaccagtacagatctggaagctgctgtt
gctgatgctttgaagaagcctgtgaggagaagatacgaaccctatgggatgtattctgat
gatgacgccaacagcgacgcctccagcgtgtgctcggagcgctcgtatggctcccggaat
gggggtatcccccactacctgcgccagactgaggacgtggctgaggtgctcaaccactgt
gccagctccaactgggctgagaggaaggaagggctgctgggtctgcagaacctgctgaag
agccagagaacgctgagtcgagtagaattgaaaagattgtgtgagattttcacccgaatg
tttgctgaccctcacagcaagattgctgattcagaacatgaggataaagaaggaaatttg
tttacatcagaaggctcttgtacaagagttttcagtatgtttttggagacccttgtggat
tttataataattcataaggatgacctgcaagactggctttttgttcttctcacacaatta
ctgaagaaaatgggagcggatttacttggatctgtgcaagcaaaagttcagaaggctctt
gatgtcacaagggactcctttccatttgatcaacaatttaacattttgatgagatttatt
gtggatcagactcaaactcctaacctcaaggtcaaagttgcaatcctgaagtacattgag
tctctcgccaggcagatggacccaacagatttcgtaaactctagtgagacaaggcttgct
gtttctagaattataacctggacaacagaaccaaagagttcagacgtgagaaaggcagca
caaattgtgctcatctctctgtttgaattgaacactcctgaatttaccatgttacttggt
gccttgccaaaaacattccaggatggtgccaccaaactcctgcataaccacctcaagaat
tccagtaacaccagtgtgggctctccaagcaacaccattggccggactccctccagacac
cccagcagccggaccagccccctgacctcacccaccaactgctcccatggtggcctgtct
ccaagcatgctggactatgatactgaaaacctgaactctgaagaaatctatagttctttg
cgtggagtgacagaagccattgaaaagtttagttttcgaagccaagaggatctgaatgag
cccattaaaagagatggcagaaaggactgcgatattgtgtcccgtgacggtggcatcgcc
tcccctgccatcgagggccggggcggcagcgaggtggtggaaggaggccggacggctctg
gacaacaagacctccctcctcaacacccagccccctcgcgccttcccagggccacgggca
cgggactacagcccctacccctactcagacaccatcagcgcctatgacaagacagccctg
aaggaggccgtgttcgacgacgacatggagcaactgcgagatgtgcccattgaccactca
gacctggtggcagacctcctgaaggagctgtccaaccacaacgagcgggtggaggagcgg
aagggcgcattgctggagctgctcaagatcacgcgcgaggacagcctgggcgtctgggag
gagcacttcaagaccatcctgctgttgctgctcgagacactcggggacaaggatcattcc
atccgagcattggctctcagagtgttgcgggaaatcctgagaaaccagccagcgaggttt
aaaaactacgcggagctaacgatcatgaagacactggaagcccacaaagactcccacaag
gaggtggtgagggctgccgaggaggccgcatccacgctggccagttccatccacccagag
cagtgcatcaaagtgctgtgccccatcgtccagacagccgactaccccatcaacctggcc
gccatcaagatgcagaccaaggttgttgagaggatcgccaaggagtccttgctgcagctc
ctcgcagacatcatcccaggcctgctgcagggttatgacaacaccgagagcagcgtgcgc
aaggccagcgtgttttgcttagtggcaatttattccgtaatcggagaagagttgaaacct
cacctggcacagctcacggggagcaagatgaagctgctcaacttatacataaagagggcg
cagaccacgaacagcaacagcagctcctcctctgatgtctccacccacagctaa
DBGET
integrated database retrieval system
