Bubalus bubalis (water buffalo): 102412774
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Entry
102412774 CDS
T05912
Symbol
BHLHE40
Name
(RefSeq) class E basic helix-loop-helix protein 40
KO
K03729
class B basic helix-loop-helix protein 2
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
102412774 (BHLHE40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbub03000
]
102412774 (BHLHE40)
Transcription factors [BR:
bbub03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
102412774 (BHLHE40)
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GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
Oscp1
Motif
Other DBs
NCBI-GeneID:
102412774
NCBI-ProteinID:
XP_006074663
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Position
21:complement(21339274..21344989)
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AA seq
412 aa
AA seq
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MERIPSAQPPPTCLPKAPGLEPGDLSGMDFAHMYQVYKSRRGIKRSEDSKETYKLPHRLI
EKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTNLIDQQQQKIIA
LQSGLQAGDLSGRNVEAGQEMFCSGFQTCAREVLQYLAKHENTRDLKSSQLVTHLHRVVS
ELLQGGTSRKPSDPAPKAMDFKEKPSSLAKGSEGPGKNCVPVIQRTFAHSSGEQSGSDTD
TDSGYGGESEKSELRVEQPYFKSDHGRRFTMGERISAIKQESEEPPMKKSRMQLSDDEGP
FTSTDLISSPFLGPHPHQPPFCLPFYLIPPSATAYLPMLEKCWYPTSVPVLYQGLNASAA
ALSSFMNPDKISAPLLMPQRLPSPLPTHPAIDSSALLQALKQIPPLNLETKD
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggagcggatccccagcgcgcaaccgccccccacttgcctgcccaaagcgccaggactg
gagcccggagacctatcagggatggattttgcccatatgtaccaagtgtacaagtcgagg
cggggaataaagcggagcgaggacagcaaggagacctacaaactgccgcaccggctcatc
gagaaaaagagacgtgaccggattaatgagtgcatcgcccagctgaaggatctcctcccc
gaacatctcaaacttacaactttgggtcacttggaaaaagcagtggttcttgaacttacc
ttgaagcatgtgaaagcattaacaaacctaattgatcaacaacagcagaaaatcattgcc
ctgcagagcggtctgcaagctggtgatctgtcggggagaaatgtggaagcaggtcaagag
atgttctgctcaggtttccagacatgcgcccgggaggtgcttcagtacctggccaagcat
gagaatactcgggacctgaaatcttcacagcttgtcacccacctccaccgtgtggtctcc
gagcttctacagggcggtacttccaggaagccgtcagacccagcccccaaagcaatggac
tttaaggagaaacccagctccctggccaaaggctccgaaggcccaggcaaaaactgtgtg
ccagtcatccagcgaactttcgcccactcgagcggcgagcagagtggcagtgatacggac
acagacagcggctacggaggagaatcggagaagagtgagctgcgtgttgagcagccatac
ttcaaaagcgatcatggacgcaggttcaccatgggagaaaggatcagtgctattaagcaa
gaatccgaagaaccccccatgaaaaagagcagaatgcagctctctgatgatgaaggccct
ttcactagcactgacctgatcagctccccgttcctgggcccacacccgcaccagcctccc
ttctgcctgcccttctacctgatcccaccgtcagcaactgcctacttgccaatgctggag
aagtgctggtaccccacgtctgtcccagtgttataccaaggcctcaatgcctctgccgca
gccctcagcagcttcatgaacccagacaagatctcggcccccttgctcatgccccagaga
ctcccttctcccctgccgacccatcctgccatcgactcttctgccctgctccaagctctg
aagcagatcccccctttaaacttagaaaccaaagactaa
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