Bubalus bubalis (water buffalo): 102412833
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Entry
102412833 CDS
T05912
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03013
Nucleocytoplasmic transport
bbub03015
mRNA surveillance pathway
bbub03040
Spliceosome
bbub05014
Amyotrophic lateral sclerosis
bbub05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102412833 (ALYREF)
09122 Translation
03013 Nucleocytoplasmic transport
102412833 (ALYREF)
03015 mRNA surveillance pathway
102412833 (ALYREF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102412833 (ALYREF)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
102412833 (ALYREF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102412833 (ALYREF)
03041 Spliceosome [BR:
bbub03041
]
102412833 (ALYREF)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
102412833 (ALYREF)
TREX complex
102412833 (ALYREF)
Spliceosome [BR:
bbub03041
]
Complex C
Other components
EJC/TREX
102412833 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
102412833 (ALYREF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
102412833
NCBI-ProteinID:
XP_025135503
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All DBs
Position
3:complement(12216325..12220242)
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AA seq
257 aa
AA seq
DB search
MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVNRGGGPIRNRPA
IARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDA
DIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL
VTSQIDTQRRPAQSVNRGGMTRNRGSGGFGGGGGTRRGTRGGSRGRGRGTGRSSKQQLSA
EELDAQLDAYNARMDTS
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaaatggatatgtctctggacgacatcattaagctgaaccggagccagcga
ggcggccgcggcgggggcaggggccgcggccgggccggctcgcagggtggccgcggcggc
ggggcccaggccgccgcgcgagtgaaccgaggcggcggacccattcggaatcggccggcc
atcgcccgcggcgcggcgggcggcggcggcaggaaccggccggcgccctacagcaggccg
aaacaacttcccgacaaatggcagcatgaccttttcgatagcggttttgggggtggtgcc
ggcgtggagaccggtgggaaactgctggtgtcaaatctggattttggagtgtccgacgct
gatattcaggagctctttgctgaatttggaactctgaagaaggcggctgtgcactacgac
cgatctggccgcagtttaggaacagctgacgtgcactttgagcggaaggcagatgcacta
aaagctatgaaacagtacaacggcgtccctttggatggccgccccatgaacattcagctc
gtcacctcacagattgacacgcagcggagacctgcacagagtgtaaacagaggtgggatg
actagaaaccgtggttcaggaggttttggtggtggcggcggcacccggagaggcacccgt
ggaggcagccggggcagaggcagaggcaccggcaggagttcaaagcagcagctttctgca
gaagaattagatgcccagctggatgcttataatgcaagaatggacaccagttaa
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integrated database retrieval system