Bubalus bubalis (water buffalo): 102413014
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Entry
102413014 CDS
T05912
Symbol
DDX54
Name
(RefSeq) ATP-dependent RNA helicase DDX54 isoform X1
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bbub03009
]
102413014 (DDX54)
Enzymes [BR:
bbub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102413014 (DDX54)
Ribosome biogenesis [BR:
bbub03009
]
Eukaryotic type
Pre-60S particles
Helicases
102413014 (DDX54)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
DNA_pol3_chi
Motif
Other DBs
NCBI-GeneID:
102413014
NCBI-ProteinID:
XP_044786054
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All DBs
Position
17:11455746..11473755
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AA seq
877 aa
AA seq
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MAAGTRPAAAPRSRATMAQWKKKKGLRKRRGAASQSHSSDSEDGEFEIQAEDDARAQKLG
PGRPLPTFPTSECTSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPT
PIQRKTIPMILDGKDVVAMARTGSGKTACFLIPMFERLKTHSAQTGARALILSPTRELAL
QTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS
VEYVVFDEADRLFEMGFAEQLQEIIGRLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIR
LDVDSKLNEQLKTSFFLVREDAKAAVLLHLLRNVVRPQDQTVVFVATKHHAEYLSELLAT
QGVSCAHIYSALDQTARKINLARFTHGKCSALIVTDLAARGLDIPLLDNVINYSFPAKGK
LFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRALTLARPPEEPSGTKGGDGVL
GRVPQGVVDDEDCGLRTSLEASLELRGLSRVADNAQQQYVRSRPAPSPESIKRAKELDLA
GLGLHPLFSSHFQQEELQRLRLVDSIRNYRSRATIFEINASSRDLSSQVMRAKREKDRKA
IASFQQGRQERQEGPAGPAPSLPAPQEEQPEKEEVAGESVEDLFTEVVGRKRQQPGPHRG
AKRRREEARQRDQAFYIPYRPKDFDSERGLSIGGDGGAFEQQVAGAVLDLMGDEAQSLTR
GRQQLKWDRKKKRFVGQSGQEDKKKIKTESGRYISSSYKRDLYQKWKQKQKIDDRDSEEE
GTFDRRGPERRGGKRGRGQAGASQPRTPGTPAGRVRSELKTKQQILKQRRRAQKMRFLQR
GGLKQLSARNRRRAQELQQGAFGRGAPSKKGKMRKRM
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggctgccggcacgcgcccggcggccgcaccgcggtccagagctaccatggcccagtgg
aagaagaagaaggggctccggaagcgccggggtgcggcgtcccagtcccacagcagcgac
tcggaggacggcgagtttgagatccaggcagaagatgacgcccgggcccagaagctggga
cctggcagacccctacccactttccccacctcggaatgcacctcggacgtggagccagac
acgcgggagatggtgcgagctcagaacaagaagaagaagaaatcaggaggcttccagtcc
atgggcctgagctacccagtcttcaaaggcatcatgaagaagggctacaaggtgccgaca
cccatccagaggaagaccatcccaatgatcctggacggcaaggatgtggtggcaatggcc
cggacgggcagtggcaagaccgcctgcttcctcatccccatgttcgagcggctcaagacc
cacagcgcccagactggggcccgtgccctcatcctctcgcccacccgagagctggccctg
cagaccatgaagttcaccaaggagcttggcaagttcactggcctcaagactgccctgatc
ctgggtggggacaagatggaagaccagtttgcagccttgcacgaaaatcctgacataatc
atcgctacccctgggcgcttggtgcatgtggctgtggagatgaacctgaagctgcagagt
gtggagtatgtggtattcgatgaggccgacaggctctttgaaatgggcttcgcagagcag
ctccaggaaatcatcggccgcctcccagggggccaccagactgtcctgttctctgccaca
ctgcccaagctgctggtggagttcgcccgagctggcctgacggagcccgtgctcatccgg
ttagatgtggactctaaactcaacgagcagctcaagacctccttcttcctggtgcgggag
gatgccaaggccgctgtgctgctccacctgctgcgcaacgtggtgcggccccaggaccag
acggtcgtgtttgtggccaccaagcaccacgcggagtatctcagcgagctgctggcgacc
cagggggtgagctgtgcccacatctacagcgccctggaccagacggcccgcaagattaac
ctggccaggttcacgcatggcaagtgctcggctctcatcgtgactgacctggccgcccgg
ggcctggacatcccactgctggacaacgtcatcaactacagcttccccgccaagggcaag
ctcttcctgcaccgcgtgggtcgtgtggcccgggccggccgaagtggcacggcctactcc
ttggtggcccccgacgaggtcccctacctactggacctacacctgttcctgggccgtgct
ctgacccttgcccgtccccctgaggagccctcaggcacgaaaggcggggacggcgtactg
ggccgggtgccgcagggtgtggtggatgacgaggactgcggcctgcggaccagcctggag
gcatcgctggagctgcggggcctgagccgcgtggccgacaatgcccagcagcagtatgtg
cgctcacggccggcgccctcgcccgagtccatcaagagggccaaggagctggacctcgcc
gggctgggcctacacccgctcttcagctctcacttccagcaggaggagctgcagcggctc
aggctggtggacagcatcaggaactaccgctcccgggcgaccatctttgagatcaacgcc
tccagccgcgacctgagcagccaggtgatgcgcgccaagcgggagaaggaccgcaaagcc
atcgccagcttccagcagggacggcaggagcggcaggagggcccggcaggcccagccccg
agcctcccagcaccgcaggaggagcagcctgagaaggaggaggtggcgggagagagtgta
gaggacctcttcacggaagttgtcggccggaagcgacagcagccaggaccccaccgggga
gccaagaggcggagggaggaggcccggcagcgggaccaggcgttctacatcccctaccgg
cccaaggattttgacagcgagcggggcctgagcatcggtggggacgggggcgccttcgag
cagcaggtggctggtgcagtgctggacctgatgggagacgaagcccagagcctgaccagg
ggccggcagcagctcaagtgggaccggaagaagaagcggtttgtgggacagtcaggacaa
gaggacaagaaaaagatcaagaccgagagtggccgctacatcagcagctcctacaagcgg
gacctctatcaaaagtggaaacagaaacagaaaatcgatgatcgtgactcagaagaagaa
ggaacttttgaccgccgtggcccagagcgaagaggtgggaagcgcggccgagggcaagca
ggtgcatcccagccccgcacccctggcacccccgcgggccgcgtgcgctcagagctcaag
accaagcagcagatcctgaagcagcggcgccgagcccagaagatgcgcttcctgcagcgt
gggggcctgaagcagctctctgcccgcaaccggcgccgcgcccaggagctgcagcagggc
gcctttggccggggtgccccttccaagaagggcaagatgaggaagaggatgtaa
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