Bubalus bubalis (water buffalo): 102413264
Help
Entry
102413264 CDS
T05912
Name
(RefSeq) ATP-dependent RNA helicase DDX19B isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03013
Nucleocytoplasmic transport
bbub03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102413264
03015 mRNA surveillance pathway
102413264
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102413264
Enzymes [BR:
bbub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102413264
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102413264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
102413264
NCBI-ProteinID:
XP_025124164
LinkDB
All DBs
Position
18:complement(1484032..1505574)
Genome browser
AA seq
484 aa
AA seq
DB search
MAGAAGRVRGRALGRFRFALPVRDLSNLHLKEEKIKSDANGAVVKTNANAEKADEEEKED
RAAQSLLNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRP
SKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANRHPQCLCLSPTYELA
LQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISEHIVIGTPGTVLDWCSKLKFIDPKK
IKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNII
KLKREEETLDTIKQYYVLCNSRDEKFQALCNIYGAITIAQAMIFCHTRKTASWLAAELSK
EGHQVALLSGEMVVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKD
GNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIE
KIAN
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggccggggctgctggccgggtacgcggccgcgccttagggcgctttcggttcgctctg
cctgtgcgcgatttgagcaacttgcatcttaaggaagagaaaatcaaatcagatgccaat
ggtgctgttgtcaagaccaatgctaatgcagagaaggctgatgaagaagagaaagaggac
agagccgcccagtccttactcaacaagctgatcagaagcaaccttgtcgataacaccaac
caagtggaggtcctgcagcgggaccccaactccccactctactcagtcaagtccttcgag
gagcttcggctgaaaccacagcttctccaaggagtctatgccatgggcttcaaccgtcca
tccaagatacaagagaatgcattgcctttaatgcttgctgagcccccacagaacttaatt
gcccagtcacagtctggtactggtaaaacagctgcctttgtgttggccatgctcagccaa
gtagaaccagccaacagacacccccagtgtctgtgcctctccccaacatatgagcttgcc
cttcaaacgggaaaagtgattgagcagatgggcaaattttaccctgaactgaagctagct
tatgctgttcgtggcaataagttggaaagaggtcagaaaatcagtgagcacattgtcatt
ggcaccccggggaccgttctggactggtgctccaagctcaagttcatcgaccctaagaag
atcaaggtgtttgttctggacgaggctgacgtgatgatagccactcagggccaccaagat
cagagcatccgcatccagaggatgctgcccaggaactgccagatgctgcttttctctgcc
acctttgaagactctgtctggaaatttgctcagaaagtggtgcccgacccaaacatcatc
aaactgaagcgtgaggaggagacactggacaccatcaagcagtattacgtcctgtgcaac
agcagagacgagaagttccaggccttgtgtaatatctacggggccatcaccattgctcaa
gccatgatcttctgccatacccgcaaaacagctagctggctggctgcggagctctcaaaa
gagggccaccaggtggctctgctgagcggtgaaatggtggtggagcagagggctgcagtg
attgagcgcttccgagagggcaaagagaaggttctggtcaccaccaacgtgtgtgcccgc
ggtatcgatgtggaacaggtgtctgtcgtcatcaactttgacctccccgtggacaaggat
gggaacccggacaacgagacctacctgcaccggatcgggcgcaccggccgctttggcaag
cggggcctggccgtgaacatggtggacagcaagcacagcatgaacatcctgaacagaatc
caggagcatttcaataagaaaatagaaagactggacacggatgacttggacgagattgag
aaaatagccaactga
DBGET
integrated database retrieval system
