Bubalus bubalis (water buffalo): 102413359
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Entry
102413359 CDS
T05912
Symbol
NOD1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04621
NOD-like receptor signaling pathway
bbub05132
Salmonella infection
bbub05133
Pertussis
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
102413359 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
102413359 (NOD1)
05133 Pertussis
102413359 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
bbub04054
]
102413359 (NOD1)
Pattern recognition receptors [BR:
bbub04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
102413359 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
CARD
LRR_4
NOD2_WH
AAA_16
AAA_22
PIF1
NPHP3_N
ABC_tran
Motif
Other DBs
NCBI-GeneID:
102413359
NCBI-ProteinID:
XP_025147026
LinkDB
All DBs
Position
8:65429498..65523177
Genome browser
AA seq
977 aa
AA seq
DB search
MEKHGRSEMEIVPSESYSFIKLLKVNREHLVTHIRNTQCLLDNLLQNDYFSTEDAEIVCA
CPTQPDKVLVTGGQLWWPDGVKSFESSVHWVRRILDLVQSKGEEVSEFFLHVIQQLADAY
VDLRPWLSEIGFSPSPLIQSKAVVNTDPVSRYSQKLQQQLGRDSKFILCYAQKEELLLEQ
MYTDTVVELVNFSNESLGSLDSLACLLDTSTGVLNEQGEIIFVFGDAGMGKSMLLQRLQS
LWAAGQLDPGIKFFFHFRCRTLSCFKKSAALCLQDLLFKHYCYPEQDPGEVFAFLLRFPH
TALFTFDGLDELHSDFDLSSEPDTSSPWEPAHPLALLASLLSGKLLKGARKLLTARTGVE
VPRHLLWKKVLLRGFSPSHLRAYTGRMFPEHAVRQRLLDQLEANPNLCSLCAVPLFCWII
FRCFQHFHDAFESSPQLPDLTVTLTDIFLLVTEVHLNRTQPTSLVQQNTRSQTETLRAGR
DTLCSLGRVAHRGMEKSLFVFNQDEVQASEVREGDLQLGFLRTMPELGLGGEQQSYEFFH
LTLQAFFAALFLVVDDKVGTRELLRFFQEWTPPEEAVATSTCYPPFLPVQCLGGHGLHGE
DPFKNKDHFHFTNLFLCGLLSKGKQKLLQHLVPTAALRRKRKALWTHLFASLRSHLKSLP
RVQSGGFNQVQALPTFIWMLRCIYETQSEKVGQLAARGICANYLKLTFCNACSADCSALS
FVLHHLRKRLALDLDNNNLNDFGVRELQPCFSRLTVIRLSVNQITDSGVKVLYEELTKYK
ILTFLGLYNNQITDVGARYIARILDECKGLTHLKLGKNKITSEGGKSLALAVKNSKSIFE
VGMWGNQIGDEGAKAFAEALRNHPSLTNLSLAFNGISTEGGKSLAWALQQNASLRIFWLT
KNELDDEVAESFAEMLKVNQTLKHLWLIQNQITAKGIAQLAEALQKNTGIMEICLNGNLI
KPEEAKVFEDEKRIVCF
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcacggccgcagtgagatggaaatagtcccatcagagtcttactccttcatt
aagttgttgaaagtcaaccgggagcatctggtcactcacatccgaaacactcagtgtctg
ctggacaacttgctgcagaatgactacttctccactgaagatgcagagatcgtgtgtgcc
tgccccacgcagcccgacaaggtgctggtgacgggaggccagctctggtggccagacggg
gtgaagagctttgagagttcagtacattgggtccgcagaattctggacctggtacagagc
aagggcgaggaggtgtccgagttcttcctgcacgtgatccagcaactcgcagacgcttat
gtggatctcaggccttggctctccgagattggcttctccccttctccgctcattcagagc
aaagctgttgtcaacactgacccagtgagcagatacagccagaagctgcagcagcaactg
ggccgggactccaagttcatcctgtgctatgctcagaaggaggagctgctgttggagcag
atgtacacagacacggtggtggagctggtcaacttcagcaacgagagcctgggcagcctg
gacagcctggcctgcctcctggacacatccacgggcgtcctcaacgagcagggtgagatc
atcttcgtgtttggcgatgcaggcatgggcaagtccatgctgctgcagcggctgcagagc
ctctgggcagcaggccagctggacccaggaatcaagttcttcttccacttccgctgccgc
accctcagctgcttcaagaagagcgcggcactgtgtctgcaggacctgctcttcaagcat
tactgctacccagagcaggaccccggggaggttttcgccttcctgctgcgctttccccac
acggccctcttcaccttcgacggcctggacgagctgcactcagacttcgacctgagcagc
gagcccgacacctcctccccttgggagcccgcccacccgctggccctgctggccagtctg
ctcagtgggaagctgctcaaaggggcgcgcaagctgctcacggcccgcacgggcgtcgag
gtcccgcgacatctcctctggaagaaggtgctcctgcgcggcttctcccccagccacctg
cgcgcctacaccgggaggatgttccccgagcacgccgtgcgccagcgcctgctggatcaa
ctggaggccaaccccaacctctgcagcctgtgcgcggtgcccctcttctgctggatcatc
ttccggtgcttccagcacttccacgacgcctttgagagctccccgcagctgcctgatctc
acggtgacgctgactgacatcttcctgttggtcaccgaggtccacctgaacaggacgcag
cccaccagcctggtgcagcagaacacgcggagccagacggagaccctccgcgccggccgg
gacaccctgtgctcgctgggccgggtggctcacaggggcatggagaagagcctcttcgtc
ttcaaccaggacgaggtgcaggcgtccgaggtgcgggagggggacctgcagctgggcttc
cttcggaccatgccagagctgggcctcggaggggaacagcagtcctatgagttcttccac
ctaaccctccaggccttctttgctgccctctttctagtggtggacgacaaggtaggcact
agggagctgctcaggttcttccaggagtggactcctcccgaggaggctgtggccacatcg
acctgctatcctccttttctccctgtccagtgcctggggggccacggcctgcatggggaa
gaccccttcaagaacaaggatcactttcatttcaccaacctcttcctgtgtgggctgttg
tccaaaggcaaacagaaacttctgcagcacctggtgcccaccgctgccctgcggcgaaaa
cgcaaggccctgtggactcatctgttcgccagcctgcgctcccacctgaagagcctgccc
cgggttcagtctgggggcttcaaccaggtgcaggccctgcccaccttcatctggatgttg
cgctgcatctacgagacgcagagtgagaaggtggggcagctggcggccaggggcatctgc
gccaactacctcaaactgaccttctgcaatgcctgctcggctgactgcagtgccctctcc
ttcgtcctgcatcacttgcgcaagcggctggcgctcgacctggacaacaacaacctcaac
gacttcggcgtgcgtgaactgcagccatgcttcagccgcctcactgtcatcagactcagt
gtgaaccagatcactgacagtggggtgaaggtgctatatgaagagctgaccaaatacaag
attctcacatttttaggcttatacaacaaccaaatcaccgatgttggagccaggtacatc
gccagaatcctggatgagtgcaaaggcctcacacacctgaaattgggaaaaaacaaaata
accagcgaaggaggaaagagtctcgctctggctgtgaagaacagcaaatccatctttgaa
gttgggatgtggggcaatcaaattggtgatgaaggagcaaaggccttcgcagaggctctg
aggaaccaccccagcttgaccaacctgagtcttgcattcaacggcatctctacagaagga
ggaaagagcctcgcatgggccctgcagcagaatgcatctctgagaatattctggctcacc
aaaaatgaacttgatgatgaagtggcagagagctttgcagagatgttgaaagtcaaccag
acattgaaacatttatggcttatccagaaccagatcacagccaaggggattgcccagctg
gcagaggcattacagaagaacactggcataatggagatttgcttaaatggaaacttgata
aagccagaggaggccaaggtctttgaagatgagaagaggattgtctgtttctga
DBGET
integrated database retrieval system
