Bubalus bubalis (water buffalo): 102413569
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Entry
102413569 CDS
T05912
Symbol
NECTIN1
Name
(RefSeq) nectin-1
KO
K06081
poliovirus receptor-related protein 1
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03266
Virion - Herpesvirus
bbub04514
Cell adhesion molecule (CAM) interaction
bbub04517
IgSF CAM signaling
bbub04520
Adherens junction
bbub05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
102413569 (NECTIN1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
102413569 (NECTIN1)
04517 IgSF CAM signaling
102413569 (NECTIN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
102413569 (NECTIN1)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102413569 (NECTIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bbub04515
]
102413569 (NECTIN1)
04090 CD molecules [BR:
bbub04090
]
102413569 (NECTIN1)
Cell adhesion molecules [BR:
bbub04515
]
Immunoglobulin superfamily
Nectin family
102413569 (NECTIN1)
CD molecules [BR:
bbub04090
]
Proteins
102413569 (NECTIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
V-set
Ig_3
Ig_2
ig
I-set
TM_ErbB1
Ig_PVRIG
Motif
Other DBs
NCBI-GeneID:
102413569
NCBI-ProteinID:
XP_044785549
LinkDB
All DBs
Position
16:55146033..55218596
Genome browser
AA seq
515 aa
AA seq
DB search
MARMGLAGAAGRWWGLALGLTAFFLPGTQAQMVQVNDSMYGFIGTDVVLHCSFANPLPGV
KITQVTWQKATNGSKQNVAIYNPAMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELEDEG
VYICEFATFPAGNRESQLNLTVMAKPTNWIEGTHAVLRARKGQDEKVLVATCTSANGKPP
SVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHRQSLACIVNYHMDRFWESLT
LNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGSLPKGVEAQNRTL
FFRGPINYSLAGTYVCEATNPIGTRSGQVEVNITEFPYTPSPPEHGRRAGPVPTAIIGGV
VGSILLVLIVVGGIVVALRRRRHTFKGDYSTKKHVYGNGYSKAGIPQHHPPMAQNLQYPE
DSDDDKKAGPLGGSSYEEEEDEEGGGGERKVGGPHSKYDEDAKRPYFTVDEAEARQDGYG
DRTLGYQYDPEQLDLAENMVSQNDGSFISKKEWYV
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggctcggatggggcttgcgggcgccgctggacgctggtggggactcgctctcggcttg
accgccttcttcctcccaggcacccaggcccagatggtccaggtgaacgactccatgtac
ggtttcatcggcacggacgtggtgcttcactgcagcttcgccaacccgctgccgggcgtg
aagatcacccaggtcacatggcagaaagccaccaatggctccaagcagaacgtggccatc
tacaacccagccatgggcgtctcggtgctggccccataccgcgagcgcgtggagttcctg
cggccctccttcacagacggtaccatccgcctctcccgcctggagctggaggacgagggc
gtctacatctgcgagtttgccaccttccctgcgggcaaccgagagagccagctcaatctc
acagtgatggccaaacccaccaactggatagagggcacccatgcagtgcttcgagccagg
aaggggcaggatgaaaaggtcctggtggccacctgcacgtcagccaatgggaagcctccc
agtgtggtgtcctgggaaacgcggctgaagggcgaggcggagtaccaggagatccggaac
cccaacggcacggtgaccgtcatcagccgctaccgcctggtgcccagccgagaagcccac
cggcagtccctggcctgcatagtcaactaccacatggaccgcttctgggaaagcctcacc
ctcaacgtgcagtacgagcccgaggtgaccatcgaggggtttgatggcaactggtacctg
cagcggatggatgtgaagctcacgtgcaaagccgatgcgaatcccccagccactgagtac
cactggaccacgctaaatggctccctccccaagggcgtggaggcccagaacagaactctc
ttcttcaggggacccatcaactacagcctggcaggaacctacgtctgtgaggccaccaac
cccatcggcacccgctcaggccaggtggaggtcaatatcacagagttcccctacaccccg
tctcctcccgaacacgggcggcgcgcggggccagtgcccacggccatcattgggggcgtg
gtggggagcatcctgctggtgctgattgtggtcggcgggatcgtggtggccctgcgccgg
cgccggcacaccttcaagggcgactacagcaccaagaagcatgtgtacggcaacggctac
agcaaggcgggcatcccccagcaccacccgcccatggcccagaacctgcagtacccggag
gactcggacgacgacaagaaagccggccccctgggcgggagcagctacgaggaggaagag
gacgaggagggtggagggggcgagcgcaaggtgggcggcccccactccaagtacgacgag
gacgccaagcggccctacttcacggtggacgaggctgaggcccgtcaggacggctacggg
gaccggactctgggctaccagtatgaccctgagcagctggacttggccgagaacatggtc
tctcagaacgacgggtctttcatttccaagaaggagtggtacgtgtag
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