Bubalus bubalis (water buffalo): 102413601
Help
Entry
102413601 CDS
T05912
Symbol
DDX19A
Name
(RefSeq) ATP-dependent RNA helicase DDX19A isoform X1
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03013
Nucleocytoplasmic transport
bbub03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102413601 (DDX19A)
03015 mRNA surveillance pathway
102413601 (DDX19A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102413601 (DDX19A)
Enzymes [BR:
bbub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102413601 (DDX19A)
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
102413601 (DDX19A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
102413601
NCBI-ProteinID:
XP_006061175
LinkDB
All DBs
Position
18:complement(1459278..1477551)
Genome browser
AA seq
478 aa
AA seq
DB search
MATDSWALAVDEQEAAVKSMSNLQIKEEKVKPDTNGVIKTNATPEKTDEEEKEDRAAQSL
LNKLIRSNLVDNTNQVEVLQRDPNSPLYSVKSFEELRLKPQLLQGVYAMGFNRPSKIQEN
ALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSRVEPAERYPQCLCLSPTYELALQTGKV
IEQMGKFHPELKLAYAVRGNKLERGQKISEHIVIGTPGTVLDWCSKLKFIDPKKIKVFVL
DEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNIIKLKREE
ETLDTIKQYYVLCNSRDEKFQALCNIYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVA
LLSGEMVVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNE
TYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLDEIEKIAN
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactcgtgggcccttgcagtggacgagcaggaagcggctgtcaagtcgatg
agtaatttgcagattaaggaagaaaaagtcaaaccagataccaatggtgttatcaaaacc
aatgccactccagagaaaacagatgaagaagagaaagaggacagagccgcccagtcctta
ctcaacaagctgatcagaagcaaccttgtcgataacaccaaccaagtggaagtcctgcag
cgggaccccaactccccgctctattcagtcaagtccttcgaggagcttcggctgaaacca
cagcttctccagggagtctatgccatgggcttcaatcggccatccaagatacaagagaat
gcattacccatgatgcttgctgagcccccgcagaacctgattgcccagtcgcagtcgggt
actggtaaaacggctgcctttgtcctggccatgctcagccgggtggagccagcagagagg
tacccgcagtgtctgtgcctctccccgacgtatgagctggcgcttcaaacaggaaaagtg
attgaacaaatgggcaaatttcatccagaactaaagcttgcttatgctgttcgaggcaat
aaattggaaagaggtcagaaaatcagtgagcacattgtcattggcaccccggggaccgtt
ctggactggtgttccaagctcaagttcatcgaccctaagaagatcaaggtgtttgttctg
gacgaggctgacgtgatgatagccactcagggccaccaagatcagagcatccgcatccag
aggatgctgcccaggaactgccagatgctgcttttctctgccacctttgaagactctgtc
tggaaatttgctcagaaagtggtgcccgacccaaacatcatcaaactgaagcgtgaggag
gagacactggacaccatcaagcagtattacgtcctgtgcaacagcagagacgagaagttc
caggccttgtgtaatatctacggggccatcaccattgctcaagccatgatcttctgccat
acccgcaaaacagctagctggctggctgcggagctctcaaaagagggccaccaggtggct
ctgctgagcggtgaaatggtggtggagcagagggctgcagtgattgagcgcttccgagag
ggcaaagagaaggttctggtcaccaccaatgtgtgtgcccgtggtatcgatgtggaacag
gtgtctgtcgtcatcaactttgacctccccgtggacaaggatgggaacccggacaacgag
acctacctgcaccggatcgggcgcaccggccgctttggcaagcggggcctggccgtgaac
atggtggacagcaagcacagcatgaacatcctgaacagaatccaggagcatttcaataag
aaaatagaaagactggacacggatgacttggacgagattgagaaaatagccaactga
DBGET
integrated database retrieval system
