Bubalus bubalis (water buffalo): 102413680
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Entry
102413680 CDS
T05912
Symbol
ABCA6
Name
(RefSeq) ATP-binding cassette sub-family A member 6 isoform X3
KO
K05649
ATP-binding cassette, subfamily A (ABC1), member 6
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102413680 (ABCA6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bbub02000
]
102413680 (ABCA6)
Transporters [BR:
bbub02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
102413680 (ABCA6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_22
nSTAND1
AAA_29
AAA_15
Motif
Other DBs
NCBI-GeneID:
102413680
NCBI-ProteinID:
XP_025135154
LinkDB
All DBs
Position
3:complement(1916893..1984049)
Genome browser
AA seq
1586 aa
AA seq
DB search
MHMKQKSVYQQTQALLCKNLLKKWRMKRETLLEWGFPILLALYMCIFSHLNENVHFPGMP
PQNLGRVDKYNRSFMDVVYTPVSNLTQQIMNKTAFAPVMKGRRIIGAPDEKSMDEIMLDT
FSYSVGVIFNDPFSYKLKFYQRYYVPILKEDFFAAYCQRTNIDDFSCALERYWKGGFVPL
QAAINAAIIQMTTNHYVMEELMSVTAVNMKTLPFIFKENLQNEMFIFYCLLYFSPLIYFL
SLNVTRERKKYKDFMNLMGLQDSAFWLSWGSIYAAFIFVTSIIITVIITSTEIIILTGFT
VIFTLFFLYGLSLIALAFLMTVLLKKTILTSLVVLLLTLFWGSVGFSAFYQQLPSPLKWI
FSICSPFAFSAGINQIIHLDYTVNGVIFPDASGDSYIMIATFSILTFDALLYLALALYFD
KILPYGNESHYSPLFFLNSSPCFQRRRTGSHVAWKDADPEPAPDEHCEPVAPEFHGREAV
RIRNVKKVYKEKTGKVEVLKGLSFDIYEGQITAVLGHSGAGKSALLRILSGSSVPTAGSV
TIYNKNLSEMQDLEEIRKITGVCPQFNVQFDMLTVKENLRLFAKIKGIQPKDVEQEVLLL
DEPTAGLDPFSRHRVWNLLRERKADRVILLSTNLMDEADMLADRKVILSNGRLKCAGSSV
FLKRRWGLGYHLSLYRNETCDPEKITSLINHHIPDAKLKTESKEKLVYTLPAERTNKFPD
LFSDLDEDCSLGVMSYEVSTSTLNEVFTKLEGNSMAEQDFEQVEMSRDTGRLHEMDPPCP
SAPEMQKAMSVAGLWRLQFWAMARLRFLQLRRGKKGLLTLLFVFGVAVFPLIVESIFYAV
LNETTDLEFKPELYFLSPGQLPQDPRTSLLIINNTESNIEDFIQSLKHQNILLEVDDFEN
RNGTEDPSYNGAIIVSGKRKDYRFSVVCNTQRLHCFPVLVSVVSSALLRMLNQAQCIRTE
RSAPHLGHMLLRTGLPHGSFFLFLVTCSLCPYIAMNSVSDYKKRTKSQLWISGLFPSAYW
CGQALVDVSLYSLMLLSMYLIFYLANREHIYLTSQVVFALVVLTLGYAASLVFLMYVIAF
IFRKRRKNSGLWSFCFYIVTIITFGIIVLFGSGVPVLIPCMALAPSATLIGFIAFLQERI
RRYWIKYQEANYDLSAADFLVCLIPYFQALLFMFVLRCLEAKCGKKIMQKDPVFRISPQS
RDAHSNADEPIGEDEDVQAERIRTATALNTSIEEKPVIIASCLHKEYAGQKKRCFSRRRK
KTAVRNISFCVKKGEILGLLGPNGAGKSSSVRMISGMMTPTAGQVELTGYGSDLDQQGDT
SIRFLGYCPQENVLWPSLTTREHLEVFAAVKGLRRADARVAISRLVDAFRLHEQLNVPVQ
KLSGGAARKLCFVLSLLGDPPVLLLDEPSTGLDPAEQKQLWQTVQRAVRNTARGALLTTH
SMVEAEAVCDRVAIMVSGRLRCIGSIQHLKNSLGKDYILELKLKEASQGMSVHTEVLRLF
PRAAPQERYSSSSTYRLPVQDVQPLSQAFHKLETVKRNFNLEEYSLSQCTLGKVFLELSK
EQELGNVDEEVNTTMRWKLLCHSEGP
NT seq
4761 nt
NT seq
+upstream
nt +downstream
nt
atgcatatgaaacagaaaagtgtataccagcaaactcaagcacttctgtgcaagaatcta
ctgaagaaatggaggatgaaaagagagaccttgctggaatggggattcccgatactttta
gcactttatatgtgcatattttcacatttaaatgaaaatgtccattttcctggaatgcct
ccccagaacctgggaagggtagataaatataataggtcttttatggatgttgtgtacaca
ccagtctccaacttgacccagcagataatgaataagacggcatttgctcctgtaatgaaa
ggaagaagaattattggggcaccagatgagaaatccatggatgaaataatgctagacact
ttctcatacagtgtgggagtcatctttaatgaccctttctcttataagttaaaattttat
cagagatattacgttcccattttgaaggaggattttttcgcagcttactgccagcgtaca
aatattgatgacttttcctgtgcactggagagatactggaaaggaggatttgtgccttta
caagctgccattaatgctgctattatacaaatgacaacaaatcactatgtgatggaggag
ttgatgtcagttactgctgtaaatatgaagacgctaccctttatctttaaggagaacctt
caaaatgagatgttcatcttttactgcttgctttacttctctccacttatatacttccta
tcactcaatgttacaagagagagaaaaaagtataaggatttcatgaacttgatgggtctg
caagattcagccttctggctctcctggggttccatctatgctgccttcatctttgtcact
tccataatcatcacagtcataataacatctactgaaattatcatcctgacgggcttcacg
gtcatatttactctctttttcttgtatggcttatccttgatcgctctggcgttcctgatg
accgtgctgctaaagaaaaccattctcaccagtctggtcgtgctcctcctcaccctcttc
tgggggagtgtgggattcagtgcgttttaccaacaacttccttcacctttgaagtggatt
ttcagtatctgtagcccctttgccttcagtgctggaattaaccagattatccacctggat
tatactgtgaatggtgtcatttttcctgacgcttctggagactcatatataatgatagct
actttttccatattgacttttgatgcccttttatacttggcattggcgttatactttgac
aaaatcctaccctatggaaacgagtcccattattcgccattgtttttcctgaactcgtca
ccttgcttccaacgccggaggactggtagtcatgtcgcctggaaagacgcggaccctgag
cccgcccccgatgagcactgtgagcccgtagccccagaattccacgggagagaagccgtc
agaatcagaaatgttaaaaaagtatataaagaaaagactggaaaagtggaagtattgaaa
ggcttgtcctttgacatctatgaaggtcagatcacggcagttctgggtcacagtggggct
ggcaaatcggcgttgctgcgcatccttagtgggtcgtctgttccaacagcaggatcagtt
accatctataataaaaatctctccgaaatgcaagacttggaggaaatccgaaagataact
ggtgtttgtcctcaattcaatgttcagtttgacatgctgactgtaaaggagaacctcagg
ctgtttgcaaaaataaaaggaattcagccaaaggacgtggagcaagaggttttgctatta
gatgagccaactgcgggattggatcctttctcaaggcaccgagtatggaacttgctcagg
gagcgcaaagcagaccgcgtgatcctcttgagcaccaacttgatggatgaagcggacatg
ctggctgataggaaagtgatcctgtccaatgggaggctgaagtgtgcaggctcgtctgtc
tttttgaagcgaagatggggtctcggctatcacctaagtttgtacagaaatgaaacatgt
gatccagaaaaaataacatccctcattaatcaccacatccctgatgctaaattgaaaacg
gaaagcaaagaaaagcttgtgtatacattgcctgcggaaaggacaaataaatttccagac
cttttcagtgaccttgatgaggattgcagcctgggtgtgatgagttatgaggtttccaca
tcaactctgaatgaagtcttcacgaaactggagggaaactcaatggctgagcaagatttt
gaacaagtggagatgagcagggacacaggacggctgcatgagatggatccaccttgccct
tctgcccccgagatgcagaaggccatgagcgtcgctggcctctggaggctgcagttctgg
gcgatggcacggctccgtttcttacagttaagacgaggaaagaaagggcttctgacccta
ctgttcgtgtttggagttgcagtgttccctttgatagtggaaagcatattctatgctgtg
ttgaatgaaaccactgatttggagtttaaacctgagttgtatttcctctctccgggacaa
cttccccaagacccccgtaccagcttattgatcatcaataacacagaatcaaacattgaa
gattttatacagtcactgaagcatcaaaatatacttttggaggtggatgactttgaaaat
agaaatggcaccgaagatccctcttacaatggggccatcatcgtttctgggaaacgaaag
gactaccgcttctcagtcgtgtgcaacacccagcggctgcactgcttccccgtcctcgtg
agcgtcgtcagcagcgcgctgctccggatgcttaatcaagcacagtgcattcggaccgag
agaagcgcaccccatttgggccacatgctgctccggacggggctcccccacggctcgttc
ttcttgtttctcgtcacgtgcagcctgtgtccttacatcgccatgaacagtgtcagcgat
tacaaaaagagaaccaagtcccaactgtggatctctggcctcttcccctctgcgtactgg
tgtgggcaggcgctagtggatgtcagcctctacagtctcatgctcctttccatgtatttg
attttctacctagcaaacagagagcacatttatctcacaagtcaagttgtatttgctttg
gttgtcctgacgcttggttatgcagcttcacttgtcttcctgatgtacgtgatagcattt
atttttcgtaagaggagaaaaaatagcggcctctggtcattttgcttctatatagtcacg
atcatcacatttggcatcattgtgctatttggctcaggcgtccctgtcctgataccttgc
atggctttagctccctcagcaaccttgattggatttatagcttttttgcaagagagaatc
cgtcgatactggataaaatatcaagaggcaaattacgacctgagtgcagctgactttcta
gtgtgcctaataccttacttccaggctttgctcttcatgtttgtcctgcgatgcctagaa
gcaaaatgtggaaagaaaataatgcaaaaggatcctgttttcagaatttccccccaaagc
agagacgctcattcaaatgcagacgaacctataggtgaagacgaagatgttcaagcagaa
agaataagaacagccaccgccctgaacacatcaatagaggagaaaccggtcataattgct
agctgtcttcacaaagagtatgcaggccagaagaaacggtgcttttcaagaaggaggaag
aagaccgcagtgcgaaacatctccttctgtgttaaaaaaggagaaattttggggttgctg
ggacctaatggcgctggtaaaagttcgtctgttagaatgatatctgggatgatgacgcca
acagctggacaggtggagctgacggggtacggttcggatctggatcagcagggggacacc
agcatccggttcctgggctactgtccccaggagaacgtgctgtggcccagcctcaccacg
cgcgagcatctggaggtgttcgccgccgtgaaagggctgcggcgagcggacgcccgcgtg
gccatctcacggctggtggacgccttcaggctgcacgaacagctgaacgttcctgtgcag
aagttatcaggaggggccgccagaaagctgtgttttgtgctgagcctcctgggagacccg
cccgtcctgcttctggatgagccgtccacaggcttggaccccgcggagcagaagcagctg
tggcagacggtccagagagccgttagaaacacggcgaggggtgccctgctgaccacccac
tccatggtcgaggcggaggccgtgtgtgaccgcgtggccatcatggtgtccgggaggctg
agatgcatcggctccatccaacacctgaaaaatagcctcggcaaggattacattctggaa
ctgaaactgaaggaggcttcccaagggatgtcagtccacacggaggtcctgaggctgttc
cctcgggccgccccgcaggaaaggtactcctcctcctcgacttacagactgcctgtgcag
gacgttcagcccctctctcaggcctttcacaagttagagacagtgaaacgtaactttaac
ctggaagaatacagcctctctcagtgcaccttgggaaaggtgttcttagaactttctaag
gagcaggagctgggaaatgtcgatgaagaggttaatacgaccatgagatggaaactcctc
tgccattctgagggcccttga
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integrated database retrieval system
