Bubalus bubalis (water buffalo): 102413718
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Entry
102413718 CDS
T05912
Symbol
PSMA6
Name
(RefSeq) proteasome subunit alpha type-6 isoform X1
KO
K02730
20S proteasome subunit alpha 1 [EC:
3.4.25.1
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03050
Proteasome
bbub05010
Alzheimer disease
bbub05012
Parkinson disease
bbub05014
Amyotrophic lateral sclerosis
bbub05016
Huntington disease
bbub05017
Spinocerebellar ataxia
bbub05020
Prion disease
bbub05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
102413718 (PSMA6)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
102413718 (PSMA6)
05012 Parkinson disease
102413718 (PSMA6)
05014 Amyotrophic lateral sclerosis
102413718 (PSMA6)
05016 Huntington disease
102413718 (PSMA6)
05017 Spinocerebellar ataxia
102413718 (PSMA6)
05020 Prion disease
102413718 (PSMA6)
05022 Pathways of neurodegeneration - multiple diseases
102413718 (PSMA6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
bbub01002
]
102413718 (PSMA6)
09182 Protein families: genetic information processing
03051 Proteasome [BR:
bbub03051
]
102413718 (PSMA6)
Enzymes [BR:
bbub01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.25 Threonine endopeptidases
3.4.25.1 proteasome endopeptidase complex
102413718 (PSMA6)
Peptidases and inhibitors [BR:
bbub01002
]
Threonine peptidases
Family T1: proteasome family
102413718 (PSMA6)
Proteasome [BR:
bbub03051
]
Eukaryotic proteasome
Core particles (20S proteasome)
alpha type subunits
102413718 (PSMA6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Proteasome
Proteasome_A_N
AMIN-like
Ribophorin_II
Motif
Other DBs
NCBI-GeneID:
102413718
NCBI-ProteinID:
XP_006043909
LinkDB
All DBs
Position
20:complement(24891517..24915077)
Genome browser
AA seq
246 aa
AA seq
DB search
MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL
LDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD
ISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLE
KKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLV
ALAERD
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgaggttccagcgctggttttgaccggcacattaccattttttctcccgaggga
cggctctaccaagtagaatatgcttttaaggctattaaccagggtggccttacatcagta
gctgtcagagggaaagactgtgcagtaattgtcacacagaagaaagtgcctgacaaatta
ctggattccagcacagtgactcacttattcaagataactgaaaacattggctgtgtgatg
acaggaatgacagctgacagtagatcccaggtacagagggcacgctatgaggcagctaat
tggaaatacaagtatggttacgaaattcccgtggacatgctgtgtaaaagaatcgctgat
atttctcaggtctacacacagaatgctgaaatgaggcctcttggttgttgtatgatttta
attggtatagatgaagaacaaggccctcaggtgtacaagtgtgatcctgcaggttactac
tgtgggtttaaagcaactgcagcaggagttaaacaaactgagtcaaccagcttccttgaa
aaaaaagtaaagaagaaatttgattggacctttgaacagacagtggaaactgcgattaca
tgcctgtctactgttctatcaattgatttcaaaccttcagaaatagaagttggagtagtt
acagtcgaaaatcctaaattcaggattcttacagaagcagagattgacgctcaccttgtt
gctctagcagagagagactag
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