Bubalus bubalis (water buffalo): 102413902
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Entry
102413902 CDS
T05912
Symbol
ABCA4
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4 isoform X2
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
102413902 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bbub02000
]
102413902 (ABCA4)
Transporters [BR:
bbub02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
102413902 (ABCA4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
ACT_13
AAA_23
AAA_22
DrrA1-3_C
Motif
Other DBs
NCBI-GeneID:
102413902
NCBI-ProteinID:
XP_025144018
LinkDB
All DBs
Position
6:49480895..49625309
Genome browser
AA seq
2281 aa
AA seq
DB search
MGFARQIKLLLWKNWTLRKRQKIRFVVELVWPLSLFLVLIWLRNVNPLYSKHECHFPNKA
MPSAGMLPWLQGIFCNVNNPCFQSPTAGESPGIVSNYNNSILARVYRDFQELLMDAPESQ
HLGQVWRELRTLSQLMNTLRMHPERIAGRGIRIREVLKDDETLTLFLVKNIGLSDSVVYL
LVNSQVRPEQFAHGVPDLMLKDIACSEALLERFLIFPQRRAAQTVRGSLCSLSQGTLQWM
EDTLYANMDFFKLFHVFPRLLDSRSQGMNLRSWGRILSDMSPRIQEFIHRPSVQDLLWVT
RPLVQTGGPETFTQLMGILSDLLCGYPEGGGSRVFSFNWYEDNNYKAFLGIDSTRKDPIY
SYDERTTTFCNALIQNLESNPLTKIAWRAAKPLLMGKILFTPDSPATRRILKNANSTFEE
LERVRKLVKVWEEVGPQIWYFFDKSTQMSMIRDTLENPTVKAFWNRQLGEEGITAEAVLS
FLYNGPREGQADDVDNFNWRDIFNITNRALRLANQYLECLILDKFESYDDEFQLTQRALS
LLEENRFWAGVVFPDMHPWTSSLPPHVKYKIRMDIDVVEKTNKIKDRYWDSGPRADPVED
FRYIWGGFAYLQDMVEQGIRRSQAREEVPVGIYLQQMPYPCFVDDSFMIILNRCFPIFMV
LAWIYSVSMTVKSIVLEKELRLKETLKNQGVSNRVIWCTWFLDSFSIMSMSICLLTIFIM
HGRILHYSNPLVLFLFLLAFSIATIMQCFLLSTFFSRASLAAACSGVIYFTLYLPHILCF
AWQDRITADMKMAVSLLSPVAFGFGTEYLARFEEQGVGLQWSNIGNSPMEGDEFSFLMSM
KMMLLDAALYGLLAWYLDQVFPGDYGTPLPWYFLLQESYWLGGEGCSTREERALEKTEPI
TEEMEDPEHPEGINDCFFERELPGLVPGVCVKNLVKIFEPYGRPAVDRLNITFYESQITA
FLGHNGAGKTTTLSIVTGLLPPTSGTVLVGGKDIETNLDAIRQSLGMCPQHNILFHHLTV
AEHILFYAQLKGKSWDEAQLEMEAMLEDTGLHHKRNEEAQDLSGGVQRKLSVAIAFVGDA
KVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADILGDRIAIISQGRLYC
SGTPLFLKNCFGTGFYLTLVRRMKTIQSQGRGREGTCSCASKGFSIRCPACAEAITPEQV
LDGDVNELTDMVHHHVPEAKLVECIGQELIFLLPNKNFKQRAYASLFRELEETLADLGLS
SFGISDTPLEEIFLKVTEALDSGHLFAGGTQQKRENINFRHPCSGPSEKAGQTPQGSSSQ
PGEPAAHPEGQPPPEREGHSRLNSGAQLIVQHVQALLVKRFQHTIRSHKDFLAQIVLPAT
FVFLALMLSLIIPPFGEYPALTLHPWMYGQQYTFFSMDQPDSEWLSALADVLVNKPGFGN
RCLKEEWLPEFPCGNSSPWKTPSVSPDVTHLLQQQKWTADQPSPSCRCSTREKLTMLPEC
PEGAGGLPPPQRIQRSTEILQDLTDRNVSDFLVKTYPALIRSSLKSKFWVNEQRYGGISI
GGKLPAPPFTGEALVGFLSDLGQLMNVSGGPMTREAAKEMPAFLKQLETEDNIKVWFNNK
GWHALVSFLNVAHNAILRASLHKDKNPEEYGITIISQPLNLTKEQLSEITVLTTSVDAVV
AICVIFAMSFVPASFVLYLIQERVNKAKHLQFVSGVSPTTYWLTNFLWDIMNYTVSAALV
VGIFIGFQKKAYTSSDNLPALAALLMLYGWAVIPMMYPASFLFDIPSTAYVALSCANLFI
GINSSAITFVLELFENNRTLLRINAMLRKLLIIFPHFCLGRGLIDLALSQAVTDVYARFG
EEHSSNPFQWDLIGKKLAAMAVEGVVYFLLTLLIQYQFFFSRWTTEPAKEPITDEDDDVA
EERQRIISGGNKTDILRLNELTKVYSGTSSPAVDRLCVGVRSGECFGLLGVNGAGKTTTF
KMLTGDTAVTSGDATVAGKSILTNISDVHQSMGYCPQFDAIDDLLTGREHLYLYARLRGV
PAEEIERVTNWSIQSLGLSLYADRLAGTYSGGNKRKLSTAIALIGCPPLVLLDEPTTGMD
PQARRMLWNTIMGIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHLKSKFG
DGYIVTMKIRSPKDDLLPDLGPVEQFFQGNFPGSVQRERHHNMLQFQVSSSSLARIFRLL
VSHKDSLLIEEYSVTQTTLDQVFVNFAKQQNETYDLPLHPRAAGASRQAKEVDKGNSAPQ
G
NT seq
6846 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgccagacagatcaagcttctgctgtggaagaattggaccctgcggaaaagg
caaaagattcgctttgtggtggaacttgtgtggcctttatctttatttctggtcttgatc
tggttaaggaatgtcaaccccctctacagcaaacatgaatgccattttcccaacaaggcg
atgccctcagcaggaatgttgccatggctccagggaattttctgcaatgtgaacaatcct
tgttttcaaagtcccactgcaggagaatctccaggaattgtgtcaaactataacaactcc
atcttggcaagggtgtatagagattttcaagaactcctcatggatgcaccagagagccag
caccttggtcaggtttggagagaactccgcaccttgtcccagctcatgaacaccctccgg
atgcaccccgagaggattgcaggaagaggaatacgaattcgggaggtcctaaaagatgat
gaaacattgacactgtttcttgtgaagaacattggtctgtctgactcagtcgtctacctt
ctggtcaactcccaagtccgtccagagcagtttgctcatggagtcccagacctgatgctg
aaggacatcgcctgcagcgaggccctcctggagcgtttcctgatctttccccagcgccgt
gcagcccagacagtgcgtggcagcttgtgctccctctctcagggaaccctacagtggatg
gaagacaccctgtacgccaacatggacttcttcaagctcttccacgtgtttcccagactc
ctagacagccgttctcaaggtatgaatctgagatcctggggaagaatattatctgatatg
tcaccaagaattcaagaattcatccaccggccaagtgttcaagacttgctgtgggtgacc
aggccacttgtgcagactggtggcccggagaccttcacacagctgatgggcatcctgtct
gacctcttgtgtggctaccccgagggaggaggatctcgggtgttctccttcaactggtac
gaagacaataactataaggcctttctagggatcgactccacaaggaaagatcctatctat
tcttatgacgaaagaacaacgaccttttgtaacgcattgatccagaacctggagtcaaac
cctctaaccaaaatagcctggagggcagcaaaacctttgttgatgggaaaaatcctcttt
actccagattcccctgcaacacgcaggatactgaagaatgctaattcgacgtttgaagag
ctggagcgtgtcaggaagttggtcaaagtctgggaagaagtagggccccagatctggtac
ttctttgacaagagcacacagatgagcatgatcagagacactctggagaacccaacagta
aaagctttttggaataggcagcttggtgaggaaggcatcactgctgaagccgtcctgagc
ttcctctataacgggcctcgagagggccaggctgacgatgtggacaacttcaactggagg
gatatatttaacatcaccaatcgtgccctacgcctggctaatcagtatctggagtgcttg
atcctggataagtttgaaagctacgatgatgaatttcaactcactcagcgagccctgtcc
ctgctggaggaaaacaggttctgggctggagtggtatttccggacatgcacccctggacc
agttccttaccaccccacgtgaagtacaagatccgaatggacatagatgtggtggagaaa
accaataagatcaaagacaggtactgggattctggccccagagctgatcctgtggaagac
ttccggtacatctggggagggttcgcctatctgcaggacatggttgaacaggggatcagg
aggagtcaggcccgggaggaggttccggttggaatctatctccagcagatgccttacccc
tgcttcgtggatgactcttttatgatcatcctgaaccgctgtttccctatcttcatggtg
ctggcctggatctactctgtctccatgactgtaaagagcattgtcttggagaaggagttg
agactgaaggaaaccttgaaaaatcagggtgtctccaacagggtgatttggtgtacctgg
ttcctggacagcttctctatcatgtcgatgagcatctgcctgctgacaatattcatcatg
catggaaggatcctgcattacagcaatccgctcgtcctcttcctgttcctgttggctttc
tccattgctacgatcatgcagtgcttcctgctcagcaccttcttctccagggccagtctg
gcagcagcctgtagtggtgtcatctacttcaccctctacctgccacatattctctgcttc
gcttggcaggaccgaattacagccgacatgaagatggctgtgagcctgctgtctcctgtg
gcatttgggtttggcactgagtacctggctcgttttgaagagcaaggtgtggggctgcag
tggagcaatattgggaacagtcccatggaaggggatgaattcagttttctgatgtccatg
aagatgatgctccttgatgctgctctgtatggcttgcttgcctggtatcttgaccaggtg
tttccaggggactatggaaccccacttccttggtacttccttctacaagagtcttactgg
ctaggtggtgaagggtgttcaaccagagaagaaagagccttggaaaagacagaaccaata
acagaggaaatggaggacccggaacacccagaaggaataaatgactgcttctttgaacgt
gagcttccaggcttggttcccggagtatgtgtgaagaatctggtaaagatatttgagccc
tatggcaggccagccgtggaccgtcttaacattaccttctatgaaagtcagattaccgca
ttcctcggtcacaatggagcagggaaaaccacgaccttgtccatcgtgaccggtctgttg
ccaccaacatccgggactgtgcttgttgggggaaaggacattgaaaccaacctggatgct
atccggcagagccttggcatgtgtccacagcacaacatcctgttccaccacctcaccgtg
gctgaacacatcctgttctacgcgcagctgaaagggaagtcctgggacgaggcccagctg
gagatggaagcaatgctggaggacacaggcctccaccacaagaggaacgaagaggctcag
gatctgtcaggtggcgtgcagaggaagctgtctgtggccattgccttcgtgggagatgcc
aaggtggtggttctggatgagcccacctctggggtggacccctactcacgtcgctcaatc
tgggacctgctcctgaagtatcgctcaggcagaaccatcatcatgtccactcaccacatg
gacgaggccgacatcctcggggaccgcatcgccatcatatcccagggacggctgtactgc
tctggaaccccactgttcctgaagaactgctttggcacaggcttctacttaaccttggtg
cgcaggatgaagactattcagagccaaggaagaggccgcgaggggacctgcagctgtgcg
tctaagggcttctccatcaggtgtccggcctgtgctgaggcgataactccagaacaagtc
ttggacggggatgtgaacgaactgaccgatatggttcaccaccacgttccagaggcgaag
ctggtagaatgcattggtcaagaacttatcttccttcttccaaataagaatttcaagcag
agagcatatgctagccttttcagagagctggaggagacgctggctgacctgggactcagc
agttttggaatttctgacactcccctggaagagattttcctgaaggtcacagaggctttg
gattcaggacatctgtttgctggaggcactcagcagaaaagagaaaacatcaactttcga
cacccctgttcgggtcctagcgagaaggccggacagactccccagggctccagcagccag
cccggagagccagctgctcacccggagggccagcctccaccggagcgggagggacacagc
cgactgaactcaggagcgcagcttattgtccagcacgtgcaggcactgctggtcaagagg
ttccagcacaccatccgcagccacaaggacttcctggcccagattgtgctcccggccact
tttgtgtttttggctctaatgctttccctcatcatccctccttttggtgaatatcctgct
ttgacccttcacccctggatgtatggacagcagtacaccttcttcagcatggaccagccg
gacagtgaatggctctcagcacttgcagatgtccttgtgaataagccaggctttggcaac
cgctgcctgaaggaagagtggcttccggagttcccctgtggaaattcaagcccctggaag
actccatctgtgtccccggacgtcacccacttgctccaacagcagaaatggacagcggac
caaccttcaccttcctgcaggtgcagcaccagagagaagctcaccatgctccctgagtgc
cctgagggcgcagggggcctcccacccccacagagaatacaacgcagcactgaaattctg
caggaccttacagacaggaatgtctccgacttcctggtaaaaacatatcctgctcttatc
cgaagcagtttgaagagcaaattctgggtcaatgaacagaggtatggaggaatttctatc
ggaggaaagctcccagctccccccttcactggagaagcacttgtcggatttttaagtgac
cttggccagttaatgaatgtgagcgggggccctatgaccagagaggctgctaaagaaatg
cctgctttccttaaacaactagaaactgaagacaatattaaggtgtggtttaacaacaaa
ggttggcatgctctggtcagcttcctcaacgtggcccacaacgccatcttacgggctagc
ctgcacaaggacaagaaccccgaggagtatggcatcaccatcataagccagcccttgaac
ctgaccaaggagcagctctctgagatcacagtactgaccacttctgtggacgctgtagtg
gccatctgcgtgatttttgccatgtccttcgtccctgccagctttgtcctttatttgatc
caggagagggtgaacaaggccaagcacctccagtttgtcagtggagtgagccccaccacc
tattggctgaccaacttcctctgggacatcatgaattacactgtgagcgctgcactggtg
gtgggcatcttcatcgggtttcagaagaaagcctacacttcttcagacaaccttccagcc
cttgctgcgctgctcatgctgtatgggtgggcagtcattcccatgatgtatccggcatcc
ttcctgttcgatatccccagcactgcctatgtggccttatcttgtgctaatctgttcatt
ggcatcaacagcagtgccatcactttcgtcctggaattatttgagaataaccggacgctg
ctcaggatcaatgccatgttgaggaagctgctcattatcttcccccacttctgcctgggc
cggggtctcattgacctggcactgagccaggcagtgacagacgtctatgcccggtttggt
gaggagcactcttcaaatccattccagtgggacctgattgggaagaagctggctgccatg
gcagtagaaggtgtggtctacttcctcttgacgctcctcatccaataccagttcttcttc
agccgatggactaccgagcctgcaaaggagcccatcacagatgaagatgatgatgtggct
gaagaaaggcagagaattattagtggaggaaataaaactgatatcttaaggctaaatgaa
ctcaccaaggtttattcaggcacctccagcccagcagtggacaggctgtgtgtgggagtc
cgctccggagagtgctttggcctcctgggcgtgaacggagctggcaaaaccaccacattc
aagatgctcactggggacaccgcagtgacctcaggcgatgccactgtcgcaggcaagagt
attttgaccaatatttctgacgtccatcaaagtatgggctactgtcctcagtttgatgca
atcgatgacctgcttactgggcgagaacatctttacctttatgcccggcttcgaggtgta
ccagcagaggaaattgagagggtgacaaactggagtattcagagcctgggcctgtctctc
tatgcagaccgcctggccggcacctacagtggaggaaataagcggaaactctccacagcc
attgcgctcataggctgcccaccactggtgctgctggatgagcccaccacaggcatggac
ccccaggcacgccgcatgctgtggaacaccatcatgggcatcatcagagaagggagagcc
gtggtcctcacttcccacagcatggaagagtgcgaggccctgtgtacccggctggccatc
atggtgaagggtgcctttcagtgtctgggcaccatccagcacctcaagtccaagtttgga
gatggctacattgtcacgatgaaaatcagatccccaaaggacgacttgcttcctgacctg
ggtcctgtggagcagttcttccagggcaacttcccaggcagcgtccagagggagaggcac
cacaacatgctgcagttccaggtctcctcctcctccctggccaggatcttccggctgctc
gtctcccacaaggacagcctgctcatcgaggagtactcggtcacgcagaccacactggac
caggtatttgtgaactttgctaaacagcagaatgaaacttacgacctccctttgcaccct
cgagctgcaggagccagccgacaggccaaggaagtggacaaagggaattctgcacctcaa
ggatga
DBGET
integrated database retrieval system
