Bubalus bubalis (water buffalo): 102413910
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Entry
102413910 CDS
T05912
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
bbub04812
]
102413910 (KATNB1)
Cytoskeleton proteins [BR:
bbub04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
102413910 (KATNB1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Katanin_con80
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
WD40_Gbeta
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
ANAPC4_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_Aladin
NBCH_WD40
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_WDR41
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
RMC1_N
WDR54
eIF2A
Beta-prop_IP5PC_F
PROPPIN
Beta-prop_LRRK2
Beta-prop_NWD2_C
Tricorn_2nd
VPS8_N
Beta-prop_WDR35_TULP_N
Beta-prop_pof12
Beta-prop_ACSF4
Ge1_WD40
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
102413910
NCBI-ProteinID:
XP_006059098
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Position
18:25327475..25345459
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AA seq
663 aa
AA seq
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MATPVVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT
GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV
ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK
MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSILFN
PDGCCLYSGCQDSLRVYGWEPERCFDVVLVHWGKVADLAICNDQLIGVAFSQSNVSSYVV
DLTRVTRTGTVARDPVQDSRPPTQQPPHPSAPLRRIYERPSTACSKPQRVKQNSESERRS
PSSEDDRDERESRAEIQNAEDYNEIFQPKNSISRTPPRRSEPFPAPPEDDMATAKEAAKP
SPATDAQFPVPNICPGGAGTLEVLSRPPVVTSTPAPKAEPAIFPATRNEPIGLKASDFLP
AVKIPQQAELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRGVWTTGDIKTSVDSAVAIN
DLSVVVDLLNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPL
ITDILAAPPSVGVDISREERLLKCRLCYKQLKSISSLVKSKSGLSGRHGSAFRELHLLMA
SLD
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggccacccctgtggtcaccaagacggcctggaagttgcaggagatcgtggcccatgcc
agcaatgtgtcctcgctggtgctgggcaaagcctcgggccggctgctggccacgggcggg
gatgactgccgcgtcaacctgtggtccatcaacaagcccaactgcatcatgagcctgacg
ggtcacacgtcccccgtggagagcgtccgtctcaacacccctgaggagctcattgtggcc
ggctcccagtcgggctccatccgtgtctgggacctggaagctgccaaaatccttcgcaca
cttatgggacacaaagccaacatctgcagcctggatttccacccatatggcgagtttgta
gcctcgggttcccaggacacaaacatcaagctctgggacatcaggaggaaaggctgtgtc
ttccgatacagggggcacagccaggctgtgcggtgtctccggttcagccccgacgggaag
tggttggcatcggccgcagatgaccacacagtgaagctctgggatctgactgctggcaag
atgatgtccgagttccctggccacacagggcctgtcaacgtggtggagttccaccccaac
gagtacctcctggcttctggcagctctgacaggaccatccgtttctgggacctggagaaa
ttccaggtggtgagctgtatagaaggggagccggggcctgtcaggagcatcctcttcaac
cccgatggctgctgcctgtacagtggctgccaggactcgctgcgcgtctatggctgggag
cccgagcgctgctttgatgtggtcctcgtccattggggcaaggtggccgacctggccatc
tgcaacgaccagctgataggcgtggccttctcccagagcaacgtctcctcttacgtcgtg
gacctgacgcgggtcaccaggacaggcacggtggcccgggaccccgtgcaagacagccgg
ccaccgacgcagcagccgccccaccccagtgccccgcttcgccgcatctacgagcggccc
agcaccgcctgcagcaagcctcagagggtgaaacagaactcggagagcgagcgccgcagc
cccagcagcgaggacgaccgggacgagcgggagtctcgggcggagatccagaacgcagag
gactacaatgagatcttccagcccaagaacagcatcagtcggacgccaccccgaagaagt
gagcccttccctgcacccccagaagatgacatggccacagccaaggaggcagcaaagccc
agcccagccacagacgcacagttcccggtgccaaacatatgtccaggcggagcgggcacg
cttgaggtcctatcccggcccccagttgtcacttccacccctgcacccaaggccgagcct
gccatctttcctgccacccgcaatgagcccatcggactgaaggcctccgacttcctgccc
gccgtgaagatcccccagcaggcagagctggtcgacgaggatgccatgtcccagattcgc
aaaggccatgacaccatgtgtgtcgtgctcaccagccgccacaagaacctggacactgtg
cggggcgtgtggaccacaggcgatatcaagacatcggtggactcggccgtggccatcaat
gacctgtctgtggtcgtagacctccttaacattgtcaaccagaaggcctccctgtggaaa
ctggatctgtgcaccacggttctgccgcagatcgagaagcttctgcagagcaagtatgag
agctacgtccagacgggctgcacctccctgaagctgatcctgcagcggtttctgcccctc
atcacagacatcctggcagccccgccctccgtgggtgtggacatcagccgggaggagagg
ctgctcaagtgccggctctgctacaagcagctcaagagcatcagcagcctcgtcaagagc
aagtcgggtttgagtggccgccacggcagtgccttccgcgagctgcacctgctcatggcc
agcttggactga
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