Bubalus bubalis (water buffalo): 102413923
Help
Entry
102413923 CDS
T05912
Symbol
FARSA
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
102413923 (FARSA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bbub01007
]
102413923 (FARSA)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bbub03016
]
102413923 (FARSA)
Enzymes [BR:
bbub01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
102413923 (FARSA)
Amino acid related enzymes [BR:
bbub01007
]
Aminoacyl-tRNA synthetase
Class II (U)
102413923 (FARSA)
Transfer RNA biogenesis [BR:
bbub03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
102413923 (FARSA)
Prokaryotic type
102413923 (FARSA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD1
PheRS_DBD3
PheRS_DBD2
HTH_11
MarR_2
tRNA-synt_2
tRNA_synthFbeta
ARM_FBXO47
Motif
Other DBs
NCBI-GeneID:
102413923
NCBI-ProteinID:
XP_006041617
LinkDB
All DBs
Position
9:complement(98446887..98456996)
Genome browser
AA seq
508 aa
AA seq
DB search
MADGPVAEVLLRRLEAADGGLDSAELATELGVEHQTVVGAVKSLQALGQIIETELRSTKR
WELTAEGEEIAQEGSHEARVFRSIPPEGLPQSELMRLPSGKVGFSKAMSNKWIRVDKSAA
DGPRVFRVVDSVEDEVQRRLQLVRGGQAEKLGEKERSELRKRKLLTEVTLKTYWVSKGSA
FSTSISKQETELSPEMISSGSWRDRPFKPYNFSAHGVLPDSGHLHPLLKVRSQFRQIFLE
MGFTEMPTDNYIESSFWNFDALFQPQQHPARDQHDTFFLRDPAQAQQLPMDYVHRVKRTH
SQGGYGSQGYKYNWKLDEARKNLLRTHTTAASARALYRLAQKKPFTPAKYFSIDRVFRNE
TLDATHLAEFHQIEGVVADHGLTLGHLMGVLREFFTKLGITQLRFKPAYNPYTEPSMEIF
SYHQGLKKWVEVGNSGIFRPEMLLPMGLPENVSVIAWGLSLERPTMIKYGINNIRELVGH
KVNLQMVYDSPLCRLDAERGPPSTQEAA
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggtccggtggcggaggtgctgctgcggcggctggaggcggccgatggcggc
ctggacagcgcggaactggcgaccgagctgggcgtggagcaccagactgtggtgggcgcc
gtgaagagcctgcaggcgctgggtcagatcattgagactgagctacgctccaccaagcgc
tgggagcttactgctgagggtgaagagattgcccaggagggcagccacgaggcccgggtg
tttcgcagcatccccccagagggcctgccccagagcgagctcatgcgactgcccagtggc
aaggtgggcttcagcaaggcgatgtccaacaagtggatccgggtggacaagagtgctgct
gacgggccccgggtgttccgagtggtggacagcgtggaggatgaggtgcagcgccggctc
cagctggtccggggtgggcaggctgagaagctgggagaaaaggagcggagtgagctccgg
aagcggaagctgctgactgaagtgactctgaagacctactgggtgagcaaaggtagtgcc
ttcagcaccagtatctccaagcaggaaacagagctgagcccagagatgatctccagtggc
tcctggcgggatcggcccttcaagccctacaatttctcggcccatggcgtcctccctgac
agcggccacctgcacccgctgctcaaggtccgctcccagttccggcagatcttcctggag
atggggttcaccgagatgccaaccgacaactacattgagagctccttctggaactttgac
gcactcttccagccccagcagcacccggcacgtgaccagcatgacaccttcttcctgcga
gatccagcccaggctcagcaactcccaatggactatgtccaccgcgtgaagcggacccac
tctcagggcggctatggctcacaggggtacaaatacaactggaaattggacgaggctcgg
aaaaacctgctgcgcacacacaccacggcagccagcgcccgcgccctctaccgcctggcc
caaaagaagcccttcactccggccaaatacttctccatcgatcgagtgttccggaatgag
accctggatgccactcacctggccgagttccaccagatcgagggcgtcgtggctgaccac
ggcctcacgctgggccacctcatgggtgtcctgcgggagttcttcaccaagctgggtatc
acccagctgcgtttcaagccagcctacaacccctacactgagcccagcatggaaatattc
agttaccaccaaggtctaaagaagtgggtggaggttgggaactctggaatcttccgccct
gagatgctgctgcccatggggctccctgagaatgtgtcggtcattgcctggggtctctcc
ttggagcgcccgacgatgatcaaatatggcatcaacaatatccgggagctggtgggccac
aaggtgaaccttcagatggtgtacgacagtcccctatgccgcctggatgctgaacggggg
cccccttcgacacaagaggctgcgtga
DBGET
integrated database retrieval system
