Bubalus bubalis (water buffalo): 102414967
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Entry
102414967 CDS
T05912
Symbol
CHD5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X3
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbub03036
]
102414967 (CHD5)
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102414967 (CHD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
102414967
NCBI-ProteinID:
XP_044798844
LinkDB
All DBs
Position
5:complement(33821441..33892497)
Genome browser
AA seq
1933 aa
AA seq
DB search
MRGPLGTEEELPRLFADEMENEDEMSEEEDGGLEGFDDFFPEEPVSLPKKKKSKKLKENR
SKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPNKKKKKKLKDKKEKKAKRKKKEEEE
DDNEDGCLKEPKSSGQLMAEWGLDDVDYLFSEADYHTLTNYKAFSQFLRPLIAKKNPKIP
MSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTIAPPLAISPQQAPQPVPIR
KAKTKEGKGPGVRKKIKGSKDVKKKGKGRKVTGLKFRFGGVGSKRKKGSSSEEDEREESD
FDSASIHSSSMRSECSAALGKKSKRRRKKKRIDDGDGYETDHQDYCEVCQQGGEIILCDT
CPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDDDDEDEGGCEEEEDDHMEFCR
VCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEP
PAPFMVGLPGPDVDPGIPPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYR
NYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNH
SFDKKGDVHYLIKWKDLPYDQCTWEIDEIDIPYYDSLKQAYWGHRELMLGEDTRLPKRLV
KKGKKLKDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTD
TILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTY
TGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIE
WACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNN
LEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYY
KFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLV
KSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQ
EAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQN
KKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEEL
FKDDVEGMMSQGQRPATPIPDVQSSKGGALAASAKKKHGSTPPGDNKDVEDSSVIHYDDA
AISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYW
EKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDED
EDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWG
MPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHV
LTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPEGPEGKKPGEVISSDPNTPVPASPAHLLP
GPLGLPDKMEAPLSYMDEKEVGVQKPKKPPEIQALPTALDRVEGEDKQESSDGKERAREE
RLEEMEKAQPSPEQLPKEEVLPEKEKVLDKLELSLVHSRGDSSDFRPDDTKAEEKEPVET
QQNGDKEEDEEGKKEDKIGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRH
DYWLLAGIVTHGYARWQDIQNDPRYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQAL
VIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKV
LNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQPRLPGP
LPDPHRREKLPPF
NT seq
5802 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcccgctgggcaccgaggaggagctgccgcggctgttcgcggacgagatggag
aacgaggacgagatgtcagaagaagaagatggtggccttgaaggcttcgatgactttttc
ccagaggagcctgtgagcctccccaagaagaaaaagtccaagaagctcaaggagaacagg
tccaaagggaagaggaagaagaaagaggggagcaatgacgagctgtcggaaaatgaagag
gatctggaagagaagtcggagagtgaaggcagtgactactccccgaataaaaagaagaag
aaaaaactcaaggacaagaaggagaaaaaagctaagcggaaaaagaaagaggaggaggag
gatgacaatgaagacgggtgcctcaaggagcccaagtcctcggggcagctcatggccgag
tggggcctggacgacgtggactacctgttctccgaggccgactaccacacgctgaccaac
tataaggccttcagccagttcctcagaccgctcatcgccaagaagaacccgaagatcccc
atgtcaaagatgatgactgtcctgggtgccaagtggcgggagttcagtgccaacaacccc
ttcaagggcagctcggcggcagcagctgcagcggcagtggccgcggccgtggagacggtc
accatcgcgcctcccctggctatcagcccccagcaggcaccccagcctgtgcccatccgc
aaggccaagaccaaagagggcaaggggcctggcgtgaggaagaagatcaaaggctccaag
gatgtgaagaaaaagggcaaagggagaaaggtgactgggctcaagttccgctttggaggg
gtcggcagcaagaggaagaaggggtcctcgagcgaggaggatgagagagaggagtcggac
ttcgacagtgccagcatccacagctcctccatgcgctctgagtgctctgctgccctgggg
aagaagagcaagaggaggcgcaagaagaagagaatcgatgatggcgatggctatgagacg
gaccaccaggactactgtgaggtgtgccagcagggtggggagatcattctgtgtgacacc
tgcccgagggcctaccacctcgtctgtctggaccccgagctggagaaagctcctgagggc
aagtggagctgtccccactgtgagaaggaagggatccaatgggagccgaaggacgacgac
gacgacgaggacgagggcggctgcgaggaggaggaggacgaccacatggagttctgccgc
gtgtgcaaggacggcggcgagctgctctgctgcgacgcctgcccctcttcctaccacctg
cactgcctcaacccgccgctgcccgagatcccaaacggtgaatggctctgcccgcgctgt
acttgtcccccactgaagggcaaagtccagcggatcctgcactggcggtggacagagccc
ccagcccccttcatggtggggctgccggggcctgacgtggaccctggtatacccccgccc
aagcccctggagggcatcccagagagagagtttttcgtcaagtgggctgggctctcctac
tggcactgctcctgggtgaaggagctccagctggagctctaccacacagtgatgtatcgc
aactaccaaagaaagaacgacatggatgagccgccgccctttgactatggctctggcgac
gaggacggcaagagcgagaagaggaagaacaaggaccctctctatgccaagatggaggag
cgcttctaccgctacggcatcaagcccgagtggatgatgatccaccgcatcctaaaccac
agcttcgataaaaagggggacgtacattacctaatcaagtggaaagatctgccctacgac
cagtgcacctgggagattgacgaaattgacatcccctactacgacagcctgaagcaggcc
tactggggccacagggagctgatgctgggagaggacaccaggttgcccaaaaggctggtc
aagaagggcaagaagctgaaggatgacaaacaggagaagcccccggacacacccattgtg
gatcccacggtcaagtttgacaaacaaccgtggtacattgactccacgggtggcacgctg
cacccataccagctggagggccttaactggctgcgcttctcctgggcccagggcaccgac
accatcctggccgacgagatgggtctgggcaagactgtgcagaccatcgtcttcctctac
tccctgtacaaggaggggcactccaaagggccctacctggtcagtgcgcccctgtccacc
atcatcaactgggaacgtgagttcgagatgtgggcccctgacttctacgtggtcacctac
acgggggacaaggagagccgctccgtgatccgggagaacgagttttcctttgaggacaat
gccattcggagtgggaagaaggtgttccggatgaagaaagaagtgcagatcaaattccac
gtccttctcacctcctatgagctcatcaccattgaccaggccatcctgggctccatcgag
tgggcctgcctcgtggtggacgaggcccaccggctcaagaacaaccagtccaagttcttt
agggtcttgaacagctacaagatcgattataagctgctgctgacagggaccccccttcag
aacaacctggaagaactgttccacctcctcaacttcctgactccagagaggttcaacaac
ctggagggcttcctggaggagtttgctgacatctccaaggaagaccagatcaagaagctg
cacgacctgctggggccgcacatgctgaggcggctcaaggctgatgtgttcaagaacatg
ccggcgaagactgagctgattgtccgcgtggagttgagccagatgcagaagaagtactac
aagttcatcctcacgcggaacttcgaggcactgaactccaaggggggtgggaaccaggtg
tcactgcttaacatcatgatggacctgaagaagtgctgcaaccacccctacctcttccct
gtggctgctgtggaggcccccgtcctgcccaatggctcctatgatggcagctctctggtc
aagtcttcagggaagctcatgctgctacagaagatgctcaagaaactgcgggatgaaggg
caccgtgtgctcatcttctcccagatgaccaagatgctggacctcctggaggacttcctg
gagtatgagggctacaagtatgagcggattgatggtggcatcacggggggccttcggcaa
gaagcaattgacagattcaatgcccctggggcccagcagttctgcttcctcctttcgacc
cgggcaggtggcctggggatcaacctggccacggcagacacggtcatcatctacgactcg
gactggaacccgcacaatgacatccaggccttcagccgcgcccaccgcattgggcagaac
aagaaggtgatgatctaccgctttgtgacgcgggcctcggtggaggagcgcatcacgcag
gtggccaagcgcaagatgatgctcacccacctggtggtgagacctggcctgggctccaag
tctggctccatgaccaagcaggagctggatgacatcctcaagtttggcacggaggagctc
ttcaaggatgacgtggagggcatgatgtctcagggccagagaccagccacgcccatccct
gatgtccagtcctccaaagggggagccttggccgccagcgccaagaaaaagcatggcagc
actccgccaggtgataacaaggacgtggaggatagcagtgtgatccactatgacgatgcg
gccatctccaagctgctggaccggaaccaggatgccacggacgacacggagctccagaac
atgaatgaatacctgagctccttcaaggtggcgcagtacgtggtgcgcgaggaggatggc
gtggaggaggtggaacgggagatcatcaagcaggaggagaacgtggaccccgactactgg
gagaagctgctgcggcaccactacgagcagcagcaggaggacctggcccgcaacctgggc
aagggcaagcgcatccgcaagcaggtcaactacaacgacgcctcccaggaggaccaggag
tggcaggacgagctctcagacaaccagtctgaatattccattggctctgaggatgaggac
gaggactttgaggaaaggccggaagggcagagtggacggcgacaatccaggaggcagctg
aagagcgacagggacaagcctctgccccctcttcttgcccgggtcggcggcaacattgag
gtgctaggcttcaacgcccgccagcggaaggcctttttgaacgccatcatgcgctggggc
atgcccccccaggatgccttcaactcccactggctggtgcgggaccttcgtgggaagagc
gagaaggagtttagagcctatgtgtccctcttcatgcggcacctgtgtgagccgggggct
gacggcgcggagacctttgcggacggcgtgccccgtgagggcctctccaggcagcacgtg
ctcacgcgcattggggtcatgtcactagttaggaagaaggttcaggaatttgagcacgtc
aacgggaagtacagcaccccggatctgatccctgaggggcccgagggcaagaagccgggc
gaagtcatctcctcggatcccaacacaccagtgcccgccagccctgcccacctcctgcct
ggccctctgggcctgccagacaaaatggaagccccactaagctacatggatgagaaggag
gtgggggtgcagaagccaaagaagcccccagaaatccaggccctgccaactgccctggac
agagtggagggagaggacaagcaggagagctccgatggcaaggagagggcccgagaggag
cgactggaggagatggagaaggcccagccctccccggagcagctgccgaaagaagaagtg
cttcctgagaaggagaaggttctggacaagctggaactgagcttggttcacagcagaggc
gacagcagtgacttcaggccagatgacaccaaagctgaggagaaggagccggttgagacc
cagcaaaatggtgacaaagaggaagatgaagaggggaagaaagaggacaagatcgggaag
ttcaagtttatgttcaacattgcagacgggggattcacagagctgcacacactgtggcag
aacgaggagcgtgcggctgtgtcctcggggaaaatctacgacatctggcaccggcgccac
gactactggctgctggcgggcatcgtcacgcatggctatgcccgctggcaggacatccag
aacgacccgagatacatgatcctcaatgagcccttcaagtctgagatccacaagggcaac
tacttggagatgaagaacaagttcctggcccgcaggttcaagctgctggagcaggcgctg
gtcattgaggaacagctccggagggccgcatacctcaacatgacccaggaccccaaccat
cccgccatggccctcaatgcccgcctggccgaggtggagtgccttgccgagagccaccag
cacctgtccaaggagtccctcgccgggaacaagcctgccaatgctgtcctgcacaaggtc
ctgaaccagctggaggagctgctgagcgacatgaaggcggacgtgacgcgcctcccctcc
atgctgtcccgcattcccccggtggccgcccgcctccagatgtcggagcgcagcatcctg
agccgcctgaccaaccgagccggcgaccccaccatccagcagccacgcctgccgggccct
ctgcctgacccccacaggagagagaagctgccgcctttctag
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integrated database retrieval system
