KEGG   Bubalus bubalis (water buffalo): 102415135
Entry
102415135         CDS       T05912                                 
Symbol
CCNH
Name
(RefSeq) cyclin-H isoform X3
  KO
K06634  cyclin H
Organism
bbub  Bubalus bubalis (water buffalo)
Pathway
bbub03022  Basal transcription factors
bbub03420  Nucleotide excision repair
bbub04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:bbub00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    102415135 (CCNH)
  09124 Replication and repair
   03420 Nucleotide excision repair
    102415135 (CCNH)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    102415135 (CCNH)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bbub03021]
    102415135 (CCNH)
   03400 DNA repair and recombination proteins [BR:bbub03400]
    102415135 (CCNH)
Transcription machinery [BR:bbub03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     102415135 (CCNH)
DNA repair and recombination proteins [BR:bbub03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     102415135 (CCNH)
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N 5_3_exonuc_N PigL_N CycT2-like_C
Other DBs
NCBI-GeneID: 102415135
NCBI-ProteinID: XP_006080287
LinkDB
Position
9:23472315..23598467
AA seq 320 aa
MYHNSSQKRHWTFASEEQLARLRADANRKFKCKAVANGKILPNDPVFLEPHEEITLCKYY
EKRLLEFCSVFKPAMPRSVVGTACMYFKRFYLNNSVMEYHPRIIMLTCAFLACKVDEFNV
SSPQFVGNLRESPLGQEKALEQILEYELLLIQQLNFHLIVHNPYRPFEGFLIDLKTRYPL
LENPEILRKTADDFLNRVALTDAHLLYTPSQIALTAILSSASRAGITMESYLSESLMLKE
NRTSLSQLLDIMKSMRNLVKKYEPPRPEEVAALKQKLERCHSAELALNVVTKKRKGYEDD
DYVSKKSKHEEVCSPKGSFM
NT seq 963 nt   +upstreamnt  +downstreamnt
atgtaccacaacagtagccagaagaggcactggactttcgccagcgaggagcagctggcg
cggttgcgggctgacgccaaccgcaaattcaaatgcaaagcggtggcgaacgggaagatt
cttccaaatgaccccgtctttcttgagcctcacgaagaaataacgctctgcaaatattat
gagaaaagattattggaattctgttcggtgttcaagccagcaatgccaagatctgttgtg
ggtacagcttgtatgtatttcaagcgcttttatcttaataattcagtaatggaatatcac
ccccggataataatgctcacttgtgcatttttggcttgcaaagtagatgaattcaatgta
tctagtccacagtttgttggaaatctgcgggagagccctcttggacaagagaaagcactc
gaacagattctggaatatgaactgcttcttatacagcaacttaatttccaccttattgtc
cacaatccttatagaccctttgagggctttctcattgatttaaagactcgctatcccctg
ttggagaatccagagattttgaggaaaacagctgatgactttcttaatagagttgcattg
acggatgctcaccttttatacacaccttcccagattgctctgactgccattttatcgagt
gcatccagagcaggaattactatggaaagttatttatcagaaagtctgatgctcaaggag
aacagaacttccttgtcccaattactagatataatgaaaagcatgaggaacttggtaaaa
aaatacgaaccacccagacctgaagaagttgctgctctgaaacagaagctggagaggtgt
cactctgctgagcttgcacttaatgtagttacgaagaagagaaaaggttacgaagatgat
gattatgtttcaaagaaatccaaacatgaggaggtatgttctccaaagggtagctttatg
tga

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