Bubalus bubalis (water buffalo): 102415263
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Entry
102415263 CDS
T05912
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbub03000
]
102415263 (RAI1)
Transcription factors [BR:
bbub03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
102415263 (RAI1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
102415263
NCBI-ProteinID:
XP_044795083
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All DBs
Position
3:28361467..28469688
Genome browser
AA seq
1887 aa
AA seq
DB search
MQSFRERCGFHGKQQTYQQTSQETSRLENYRQPSQAGLSCDRQRLLTKDYYGPQPFPGYE
GGAGTPATARAGKGLSSPQAPPGRPAFAGYTVQDGSPYTGRYSGEEGLQAWGGPQPPPPQ
PQPLPGGVGKYDENLMKKTVVPPSRQYPEQGAQLPFRTHALHVQQQLPQPPPSLAYPKLQ
RQKPQSDLASPLPFSQGSHFPQQSQSFPTSSTYSSSGQAGGQGAHSYKSCTAPSAQPHDR
PLTANASLAPGQRVPNLHAYQSSRLSYDPQKQQQQQQQALQSRHHAQESLHYQNLAKYQH
YGQQGPGYCQPDATVRTPEQYYQTFSPSSGHSPARSVGRSPSYSSTPSPLMPNLENFPYN
QQPLGPGAFPAGLTDHSHFMPLLNPSPTDAAGSVDTQAANCKALQKDKLPESLLSDLSLH
SLTALTSQVENISNTVQQLLLSKAAGPQKKGLKSLVGRTPEQHKSQHCSPEGSGYSAEPA
GTPLSEPLSSTPQSTHAEPPEADYLSGSEDPLERSFLYCSQARGSPARVHGGSKAKPESV
STCSVTSPDDMSTKSDDSFQSLHSSLPLDSFSKLVAGERDCPRLLLSALAQEDLASEILG
LQEAISEKADKAWAEAPGLAKDTGKPPFSLENHSACLDPVAKGAWPRPGEPEALPEALQL
DKGSSAKDFSPGLFEDPSVGFTTPDPKKTAGPLSFGTKPTLGAAASDPTVAFDCFPDTTS
AGSADGAHPFAWPEENLGDACPRWGLHPGELTKGLEQGGKATDSASQDGTREASACLGFQ
EEAPPGEKAAVPRDSQQETVGGVKEEAGGLLQCPEVSKADRWLDDSRHCCSAADFGDLPL
LPAPGRKEDLEAEEYSSLCELLGSPEQRPGLQDALSPKAPLLCGKEEVEEVLDPKASWGS
PCPLSGDSVILLGPTVGAESKVQSWFESSLSHMKPEEEGPEGVLAPGDSAAVTPEASLAQ
KPNKPAVPEAPIAKKEPVPRGKSLRSRRVHRGLPEAEDSPCRAPALPKDLLLPESCTGPP
QGQMEGAGAPGRGISEGLPRMCTRSFTALSEPRTPGPPGLPTTPAPPDKLGGKQRAAFKS
GKRVGKPSPKAASSPSNPAALPVASDSSPMGSKTKETDSLDAPGKDQRSMILRSRSRAQE
AFHSKRRRPSESRLPNCRAAKKLLANNHLPTTFKVAGSPQKEGRAGQRVRVPKPGASGKL
SDRPLHALKRKSAFMAPVPTKKRNLVLRSGGLGGDVKEEGAEGSPTLFKRMTSPKKAKPT
KGNGEPTAKPPPLETPDAGLKLASRASFQGAMKTKVLPPRKGRGLKLEAIVQKITSPSLK
KFACRAPGAPPGNPVSPSLPEKERGLKSAGGSLLGAEEGLLNVSPGQKFPAALGAEPLCR
NPTNRSLKGKLVNSKKLSLTDGFKTEAFTSPEALLPGGTALAPKKRSRKGRTGALGLPKG
SLEKRPHLGPALLLTPRDRANGTQGGSEDSSGVGGKKPKTEELGLAAQPPEGRPCQPQTR
AQKQPGHANYSSYSKRKRLTRGRAKSTTSSPCKGRAKRRRQQQVLPLDPAEPEIRLKYIS
SCKRLRADSRTPAFSPFVRVEKRGAFTTVCTVVNSPGEEPQPQRKPSSSSSSSCSLDTAG
ASLATLPGGSVPPPRPSLPLSSTMHLGPVVSKALSTSCLVCCLCQNPANFKDLGDLCGPY
YPEHCLPKKKPKLKEKVRLEGACEEASLPLERTLKGIECPAAASSAATTTTGKPPRPDGP
ADPAKQGSLRTSARGLSRRLQSCYCCDGRGDGSEEAAPADKSRKHECSKEPPAEPGGDTQ
EHWVHEACAVWTGGVYLVAGKLFGLQEAMKVALDMTCSSCQEAGATIGCCHKGCLHTYHY
PCASDAGCIFIEENFSLKCPKHKRLPL
NT seq
5664 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttttcgagaaaggtgtggtttccatggcaaacagcagacctaccagcagacc
tcacaggagacgtcgcgcctggagaactacaggcagccaagccaggccgggctgagctgc
gaccgacagcgtctgctgaccaaggactactacggcccgcagcccttccccggttacgag
ggcggcgcgggcacgcccgccacagcgcgcgccggcaaaggcctgtcctcgccgcaggcc
ccgccggggaggccggccttcgcgggctacaccgtccaggacggcagcccctacacgggc
cgctactcgggcgaggagggcttgcaggcctgggggggcccccagccaccaccccctcag
ccgcagcccctgccaggtggggtgggcaaatatgacgagaacctgatgaaaaagacggtg
gtgccccccagccggcagtacccagagcagggtgcccagctgcccttccggactcatgcc
ctccacgtccagcagcagctgccgcagcccccaccatccctggcataccccaagctccag
aggcagaaaccccagagtgaccttgcctcccctctgcccttctcccagggcagccacttc
ccccagcagtcccagtccttccccacctcctctacctactcctccagtggccaggccggt
gggcagggggcccactcctacaaaagctgcacagccccctccgcccagccccacgacagg
ccgctgaccgccaacgccagcctggccccaggccagcgggtcccaaaccttcatgcctac
cagtccagccgcctcagctatgacccacagaagcagcagcagcagcagcagcaggccctc
cagagccgtcaccatgcccaggaaagcctgcactaccaaaacctcgcaaagtaccaacac
tatgggcagcaaggcccaggctactgtcagccggacgcgactgtcaggaccccagagcag
tactaccagaccttcagccccagctccggccactcgccggcccgctccgtgggccgctca
ccctcctacagctccaccccgtcgccactgatgcccaacctggagaactttccctacaac
cagcagccacttggccctggggccttccccgctggcctcaccgaccacagccacttcatg
cccctgctcaatccctccccgacggatgctgccggctctgtggacacccaggctgccaac
tgcaaggccctgcagaaggacaagcttcccgagagcctgctgtcggacctcagcctgcat
agcctcacggccctgacctcccaggtggagaacatctccaacaccgtgcagcagctgctg
ctgtccaaggcggccgggcctcagaagaagggcctcaagagcctggtgggccggacgccg
gagcaacacaaaagccagcactgcagcccggagggcagcggctactcggccgagccagcg
ggcacaccgctatcggagccgctgagcagcacgccgcagtccacacacgctgagccgccc
gaggccgactacctgagcggctctgaggacccgctggagcgcagcttcctctactgcagc
caggcccgtggcagccccgccagggtccacggcggctccaaggccaagcccgagtccgtg
tccacctgctccgtgacctcgccggacgacatgtccaccaagtccgacgactccttccag
agcctgcacagcagcctgcccctcgacagcttctccaagcttgtggctggcgagcgagac
tgcccacggctgctgctcagcgccttggcacaggaagacttggcctccgagatcctgggg
ctgcaggaggccatcagtgagaaggccgacaaggcctgggctgaggcaccgggcctggcc
aaagacaccggcaagccgcccttctctctggagaaccacagcgcctgcctggaccctgtg
gccaagggtgcatggccacggccaggggagccggaggccctgcccgaggccctgcagctg
gacaagggcagcagcgccaaggacttcagtccggggctatttgaagacccctctgtgggc
ttcaccacccctgaccccaagaagacagctggtcccctctccttcggcaccaagcccacc
ctgggggccgcggcctcagaccccaccgtggcttttgactgcttcccagacacgacctct
gctggctcggcggatggtgcccacccctttgcctggcccgaggagaacctgggggatgcc
tgtcctcggtgggggctgcaccccggcgagctcaccaagggtctggagcagggcggaaag
gccactgacagtgccagccaggatggcacccgggaggcttcggcctgcctgggcttccag
gaggaggcgccccctggggagaaggctgcggtgccccgggactcccagcaggagacggtg
ggtggggtgaaggaggaggccggcgggctgctgcagtgccccgaggtgagcaaggccgac
cgctggctggatgacagccggcattgctgctcggctgccgattttggggacctcccactg
ctaccggcaccgggccggaaggaggacctggaggccgaggaatactcatccctgtgcgag
ctcctgggcagccccgagcagaggccgggcctgcaggatgcgctgtcgcccaaggcccca
ctgctgtgcggcaaggaggaggtggaggaggtgctggaccccaaggccagctggggatcc
ccgtgccccctctctggggactcagtcatcttgctgggccccactgtgggtgctgagtcc
aaggtccagagctggttcgagtcctccctgtcccatatgaagccagaggaagaggggccc
gagggggtgctggccccaggggattccgccgccgtgaccccggaggcctccctggcacag
aagccaaacaagcctgctgtgcccgaggcccccattgccaagaaagagcctgtgcctcgc
ggcaaaagcttgaggagccggcgggtgcaccgggggctgcctgaggccgaggactccccg
tgcagggcaccggcgctgcccaaagacctgctgctccccgaatcgtgcacagggcccccc
cagggacagatggagggggcgggggccccaggccgggggatctcagaaggacttcccagg
atgtgtacccgctccttcacggccttgagcgagccccgcacacccggacctccaggccta
cccaccacccctgcccccccagacaagctggggggcaagcagcgagccgccttcaagtca
ggcaagcgggtggggaagccctccccaaaggccgcttccagccccagcaacccggccgcc
ttgcccgtggcctccgacagcagccccatgggctccaagaccaaggagacggactcgctg
gacgcaccgggcaaagaccagcggtccatgatcctccggtcccgcagcagggcccaggaa
gccttccactccaagcgcaggcggccctcggagagccgactgccaaactgccgtgccgcc
aagaagctcctcgccaataaccacctgcctaccacgttcaaagttgctggcagcccccag
aaggaggggagggcgggccagcgggtgagggtccccaagcctggtgccagcggcaagctc
tcagatcgacccctccacgccctcaaaaggaagtcagccttcatggctcccgtccccact
aagaaacgcaacctggtcttacgcagtggcggcctcgggggagacgtgaaggaggagggg
gccgagggctcccccaccctcttcaagaggatgacgtctcccaagaaggcgaaacccacc
aagggcaatggtgagcccacggcgaagccaccgcccctggaaaccccggacgctggcctg
aagctggcctcacgggcgtccttccagggagccatgaagaccaaggtgctgccaccccga
aaaggccggggcttgaagctagaggccattgtgcagaagatcacctcgcccagcctgaag
aagttcgcatgcagagcaccaggggcccctcctgggaatcctgtgagcccatccctcccc
gagaaagaacgtgggctcaagagcgctgggggaagccttctgggggcagaggaaggtctc
ttaaatgtgagccccgggcagaagttcccggcagctctgggggccgagccgttgtgcaga
aatccgaccaatagatccttaaaaggcaaactcgtgaacagtaagaaactgtccttgacc
gatggtttcaaaacagaggccttcacgtccccagaggccctgctgcccgggggcactgcc
ctggcgcctaagaagagaagccggaaaggtagaactggggcccttggactccccaaaggc
tccctggagaaaaggccccacctcggcccagctctgctgctgactccccgagacagggcc
aatggcacgcaggggggcagtgaggacagctctggcgtaggaggcaagaagccaaagacg
gaggagctgggcctggccgcccagcccccagagggccggccctgccagccccagacaagg
gcacagaagcagccgggccatgccaactacagcagctattccaagcggaagcgcctcaca
cggggccgggccaagagcaccacctcctcaccctgtaaggggcgtgctaagcggcggcgg
cagcagcaggtgctgcccctggatcccgccgagcctgaaatccgcctcaagtacatttcc
tcctgcaagcggctgcgggcagacagccgcacccccgccttctcgcccttcgtgcgggta
gagaagcggggtgcgttcaccaccgtgtgcactgttgtcaactccccgggagaggagccc
cagccccagaggaagccttcctcctcctcctcctcgtcctgctccttggacacggccggg
gcctccctagccacgctccctggaggctccgtcccaccgcctcggccctccctgcccctc
tcctccaccatgcacctggggcccgtggtttccaaggccctgagtacctcttgccttgtt
tgctgcctctgccaaaacccggccaacttcaaggacctcggggacctctgtgggccctac
taccctgaacactgcctccccaaaaagaagccaaaactcaaggagaaggtgcggctggag
ggtgcctgtgaggaggcctcgctgcctcttgagaggacactcaaaggcatcgagtgccca
gctgctgcatcttctgctgccaccaccaccaccgggaagccccccaggcctgatggccca
gccgatccggccaagcagggctctctgcgcaccagtgcccggggcctgtcccggcggctg
cagagttgctactgctgtgacggccggggggatggcagtgaggaggcagccccagccgac
aagagccgcaagcatgagtgcagcaaggagccgccggctgagcctggtggggacacccag
gagcactgggtgcatgaggcctgcgctgtgtggacaggcggggtctacctggtggccggg
aagctctttgggctgcaggaggccatgaaggtggccctggacatgacttgttccagctgc
caagaagcgggggccaccatagggtgctgccacaaaggatgcctccacacctaccattac
ccgtgtgccagcgatgcgggttgtatattcattgaagagaacttttctttgaaatgcccc
aaacataagaggctgccgttgtaa
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