Bubalus bubalis (water buffalo): 102415276
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Entry
102415276 CDS
T05912
Symbol
SH3TC1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X2
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bbub04131
]
102415276 (SH3TC1)
Membrane trafficking [BR:
bbub04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
102415276 (SH3TC1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_8
TPR_12
TPR_2
SH3_1
SH3_2
Motif
Other DBs
NCBI-GeneID:
102415276
NCBI-ProteinID:
XP_006043058
LinkDB
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Position
7:complement(3275863..3337611)
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AA seq
1384 aa
AA seq
DB search
MINQPWEAAQQLRPASRRAQMQGGSGAGSRGRWRPLCSPTGCGRRRRPAGPTSEEPGAAI
RCPLSYGAGRRYGALDGQRLARHAEPLAVRPPPAMEGPEEPAPRGNGPAGPLGGSGNHGV
REVAKSTSVSWDRPRPEEAKATVRGDLTLQLLAVRRKSGLPDPNLQQALRGRLRLLENES
CEVARALGELSARLLSIHSDQDRLVVTFKTFEEIWKFSTYHALGFTHHCLENLLMDQAFW
LLEPDEDQETAVRVQVDADALRLAYESLLVQEGPFFVLCPDHHVRVRNGPQPFRRPPRGP
QADAAAAVDSPARSPGTSSETEGAAAAAPEPLIPFHQWALRVPKDSVNDPLGGPVALDIQ
LMAMGPALAVADCQGSGPEEMTFRSGDHIEILGAHVPGLPWCLGRHAASGQVGFVRTSLI
NVQGQASDLENVIFLSEEERSFFSHEGHFSEEEARQLLRRMSSTNVCTMYSLDTSEEAEM
QQQQEEQEMSPPCLNPEPQEILQTVKNVLEQCKSCQGCPEEPGSPGIHRASSGASQPDTE
EPSFCLDAGDDWADPEALGSQLLFLDSPGFQACFQGLYDLYPPTLSGVFGGFTDEEQLVR
RLAEARGVAKKAGLPMALARLCFLLGRLCVRQLKLSQARVYFEEALGVLGGRFGDLVLVA
AVYTSLASVHLRQKNKEKCAQVVPKALALLLGTPGHVGSSEADSSLLTLALRRAISSRSP
QAEARACFLLAKHHARLKQPEEAMPFLERLLLLLPEAAGTLGTSWPMDCYLLLAGIYSQR
CLPHLALSCIRVASLRAQGSLGSALQSAALVLQNSPRLPVLPAQLAHYLRRALATLAPGS
GEALRGPVYASLAQLYSQHGWQGRAIAFMAQAVETDAQLGSRTVVDRLVALAWLHILHRQ
SPAALGILESLLEATVATPDQEGLIANMMAIALKRTGRTRRAAEGYYRALRVARRLSHPQ
NEAVVLANFGALCLQAGAGGLAQHYLLEAVKLFSQLPSREGGLDFTRVLLRLGDLCTRRA
LARQAKCYYEWAFLVAVEMDHWDSQLLAVQRLCHFYSAVVPNEARCVVYHEFQLSLARRV
NDKVLEGQLLETISQLYLSLGTERAYRSALEYTKRSLGVFIDLLKKDKEAHAWLQAGKIY
YVLRQSELVDLYIQAAQNAALYTGDPGLGLQLFEEAGDIFFNGTRDREKAVSFYRDRALP
LAVSTGSREAELRLCNKLSALLAETETPQEGLEFAHTALALSLTLGDRLNQRVACHRLAA
LHHRLGHGELAEHFYLKALSLCTSPLEFDEETLYYVKVYLALGNIIFYDLKDPLDAAGYY
QLALAAAMDLGNKRAQMKLCARLASIYHHSLLDREMSLFFYQKARTFATELSVRRGHLVP
GPPS
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaccagccctgggaggcggcgcagcagctcaggcctgcctctcgccgggcccag
atgcagggaggaagtggggcaggaagcagggggcggtggcggccgctgtgcagtccaacg
ggctgtgggcggcggagacggcctgcggggcccaccagcgaggagccaggagcggccatc
cggtgcccactgtcctacggagcggggcgcaggtacggggctctggacgggcagaggcta
gcccggcatgctgagcccttggcagtgaggccgccaccagccatggagggcccagaggag
ccagcccccagggggaatgggcccgcagggcccttggggggcagtggcaaccacggagtc
cgggaagtggccaagagcacgtccgtcagctgggatcgaccacggcccgaggaggccaag
gccaccgtccgaggggacctgactttgcagctgctggcggtgcggcggaagagcgggctg
cctgaccccaacctgcaacaggccctgcggggccggctccgcctgctggagaatgagagc
tgcgaggtggcccgcgccctcggggagctgtcggccaggctgctgtccatccacagtgac
caggaccggctggtggtgacgtttaagacgtttgaagaaatctggaagttttccacctac
cacgctcttggcttcactcatcactgcctggagaacctgctcatggaccaggccttctgg
ctgctcgagcccgacgaggaccaggagacggccgtccgggtccaggtggatgcggacgcc
ttgaggctggcgtacgagagcctcctcgtccaggaagggcctttcttcgtcctgtgtccc
gaccaccacgtgagagtgaggaacggcccccagcccttcaggcggcctccgaggggccct
caggcagacgcggctgcagcagtggactctccagcccggagtcccggcacgtcctcagag
acggagggggcagcggcggccgctccggagcccttgattccgttccatcagtgggctctc
agggtgcccaaggactctgtcaatgaccctctgggtggacccgtggctctggacatccag
ctgatggccatgggcccggccttggccgtagcggactgccagggctcagggcccgaagag
atgaccttccgaagcggtgaccacatcgagatcctgggcgctcatgtgcccggcctgccc
tggtgcctgggccggcacgcggcctccggccaggtcgggtttgtgcggacgagcctcatc
aatgtgcagggccaggcgtctgacttggaaaacgtgatttttctcagtgaagaagaaagg
tctttctttagccatgaaggacacttttctgaggaggaggccaggcagctgctgagaagg
atgtccagcacaaatgtctgcaccatgtacagcctggacacatcagaagaagctgagatg
cagcagcagcaggaggaacaagaaatgtccccgccttgcctgaacccagagccacaggag
atcctgcagactgtgaagaatgttctagaacaatgcaagtcctgccagggctgccccgag
gaaccagggtcccccggtatccacagggcatccagtggtgcaagccagccagacaccgag
gagccctccttctgcctggacgcaggagatgactgggccgacccagaggccctgggctcg
cagctgctgttcctggactcacccgggttccaggcctgtttccagggcctgtacgacctc
tacccacccacgctgagcggcgtgttcggcggcttcaccgacgaggagcagctggtcagg
cggctggccgaggcccgtggggtggccaaaaaagccgggctgcccatggccctggccagg
ctctgcttcctgctgggacggctgtgtgtgcggcagctgaagctgtcccaggcccgcgtg
tacttcgaggaagcgctgggggtgctcgggggccgcttcggggacctggtcctggtggcg
gctgtgtacaccagcctggcctcggtccacctgcggcagaagaacaaggagaagtgcgca
caggtggtgcccaaggccttggccctgctcctggggacgcccggccacgtcggcagctcc
gaggctgattccagcctcctgaccctggccctgaggagggccatcagcagccgcagcccg
caggccgaggcccgggcctgcttcttgctggccaagcaccacgcccgcctcaagcagccg
gaggaggccatgcccttcctggagaggctgctgctgctgctccccgaggcggcggggacc
ctgggcacctcctggcccatggactgctacctgctgctggcgggcatctacagccaaagg
tgcctgccgcacctggcgctgagctgcatcagggtggcctcgctgcgggcacagggctcg
ctgggcagtgcactccagagcgcggccctggtcctgcagaacagcccgcggctccccgtc
ctgcctgcccagctcgctcactacctccggcgggcgctggccaccctggcccctgggtcc
ggggaggccctacgtggccccgtctacgccagcctggcccagctgtacagccagcacggg
tggcagggcagggccattgccttcatggctcaggccgtggagacagacgcccagctgggc
agccgcaccgttgtggaccgccttgtggccctggcctggctgcacatccttcacaggcag
agcccggcagccctgggcatcctggagtccctcctggaggccacggtggccaccccagac
caagagggcctgattgccaacatgatggccattgcactgaaaagaaccggcaggacccgg
cgggcagccgagggctactaccgcgccctgagggtggcccggcgcctgagccacccgcag
aacgaggcggtggtcctggccaacttcggggccctgtgtctgcaggccggcgccggcggg
ctggcccagcactacctcctggaggccgtgaagctcttctcgcagctgcccagcagggag
ggcggcctggacttcacccgggtgctgctgcggctgggggacctgtgcacccgcagggcg
ctcgcccggcaggccaagtgctactacgagtgggccttcctggttgctgtggagatggac
cactgggacagccagctgcttgccgtccagcggctctgccacttctacagtgcagtcgtg
cccaacgaggcccggtgcgtcgtctaccacgagttccagctctcgctggcccgcagggtg
aacgacaaggtgctggaggggcagctcctggagaccattagccagctctacctgtccctg
ggcaccgagcgagcctacaggtccgccctggagtacaccaagcgcagcctgggggttttc
atcgacctgctgaagaaggacaaggaggcgcacgcctggctgcaggcggggaagatctac
tacgtgctgcggcagagcgagctggtggacctgtacatccaggcggcgcagaacgccgcc
ctgtacacgggggaccccggcctggggctgcagctcttcgaggaggccggagacatcttc
ttcaacgggacccgggatcgcgagaaagcggtgtcgttctaccgggaccgggcactgccc
ctggcggtgtccacggggagccgggaggccgagctgcggctgtgcaacaagctgtccgcg
ctgctggctgagacggagacgccccaggagggcctggagttcgcccacacggccctggcg
ctcagcctcaccctgggggaccggctgaaccagcgggtggcctgccaccggctggccgcc
ctgcaccaccggctgggccacggcgagctggctgagcacttctacctcaaggcgctgtcg
ctctgcacctcgccgctggagttcgacgaggagaccctgtactacgtgaaggtgtacctg
gcacttggcaacatcatcttctacgacctcaaggacccgctggatgcggccggatactac
cagctggcgctggcggcggccatggacctgggcaacaagcgggcccagatgaagctctgc
gcgcgcctggcctccatctaccaccactccctgctcgaccgcgagatgtccctcttcttc
taccagaaggcgcggaccttcgccaccgagctcagcgtccgccggggccacctggtcccc
gggcccccgtcctga
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