Bubalus bubalis (water buffalo): 102415319
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Entry
102415319 CDS
T05912
Name
(RefSeq) cartilage intermediate layer protein 1 isoform X1
KO
K24436
cartilage intermediate layer protein
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
bbub04990
]
102415319
Domain-containing proteins not elsewhere classified [BR:
bbub04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
102415319
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
CarboxypepD_reg
Ig_2
I-set
TSP_1
ig
CarbopepD_reg_2
TSP1_spondin
TSP1_CFP_C
V-set
Motif
Other DBs
NCBI-GeneID:
102415319
NCBI-ProteinID:
XP_006050249
LinkDB
All DBs
Position
11:90671350..90687773
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AA seq
1182 aa
AA seq
DB search
MAGAKACTFFFLVLEITSALGRQMMLTQSVRRVQPGKRTSAVFAKPANLLDSPGEWTIWF
NIDHPGGQGDYERLDAIRFYYGDRVCARPLRLEARTTNWKPAGSTGQVVHGSPLEGFWCL
NREQRPGQNCSNYTVRFLCPPGSLRRDTEHSLWSPWSPWSKCSAACGHPGVQTRTRTCLA
ESVSLCSEATEEGRHCMEQACSACDLTCPMGKANAECDACMCQDFVLYGAVSLPGGAPAS
GAAVYLLSKTPKLLTQTDSSGRFRVPGLCPDGKSILKITKTKFAPIHLTVPKTRLKAATI
RAEFVRAETPYIVMSPETKARRAGQSVSLCCKATGKPRPDKYFWYHNNTLLDPSLYKHDS
KLVLRNLRRDQAGEYFCKAQTDAGAAKSRIAQLTVIASDEIPCNPTPESYLIQLPHDCFQ
NATNSFYYDVGRCPVKTCAGQQDNGIRCRDAVEHCCGISKTEEREIQCSGYTLPTKVATE
CSCQRCTETRRIVRGRVSAADNGEPLRFGHVYMGNTRVSMTGYKGTFTLHVPQDTERLVL
TFVDRMQKFVNTTKVLPFNKKGSAVFHEIKMLRRKEPITLEAMETNIIPLGDMAGEDPVA
ELEIPSKSFYRQNGEPYMGKVKASVTFLDPRNISTATAAQSDLNFINDEGDTFPLRTYGM
FSVDFRDEATSESLNVGKVKVHLDSTQVKMPEHVPMMKLWSLNPDTGLWEEEGDFKPESQ
RRNRREDRTFLVGNMEIRERRLFNLDVPESRRCFIKVRAYRSERFLPSEQIQGVVVSVIN
LEPRTGFSSNPRAWGRFDSVLTGPNGACLPAFCDDQSPDAYSAYVLASLAGEELEAVESS
PKFNPNAIGVPQPYLNKLKYRRTDHEDPRVKKTAFQISMAKPRPNSPEEGNGPIYAFENL
RECEDAPPSAAHFRFYQIEGDRYDYNTVPFNDDDPMGWTEDYLAWWPKPMEFRACYIKVK
IVGPLEINVRSRNMGGTHRRTVGRLYGIRDVKSTRDRDQPNISSACLEFKCSGMLYDQDR
VDRTLVKVIPQGSCQRASVNSMLHEYLVNHLPLAVNNNTSEYTMLAPLDPLGHNYGIYTV
TDQDPRTAKEIALGRCFDGTSDGSSRVMKANVGVALTFNCVERQVGRQSAFQYLQNTPAQ
PSPASTVRGRVPSRRQRASQGSQRGGVASLRFPGAAQQPLSD
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggcaggggcgaaggcctgcacgttcttcttcctagttctggagatcacctcagcgttg
gggaggcagatgatgctcactcagtcggtaagaagagtccagcctgggaagaggacctca
gccgtctttgccaagcctgctaacctcctggacagtcctggggagtggacgatctggttc
aacattgaccacccgggtgggcagggtgactacgaacggctggatgccattcggttctac
tatggggaccgggtgtgcgctcggcccctgcggctagaggctcgaaccaccaactggaaa
cccgcaggcagcactggccaagtggtccatggcagccccctcgagggcttctggtgcctc
aacagggagcagcgacccggccagaactgctccaattacaccgtgcgcttcctctgccct
ccaggatccttgcgccgagacacagagcacagcctctggagtccatggtctccctggagc
aagtgttctgctgcttgtggtcaccctggggtccagacccgaacacgcacctgcttggcg
gagtcggtgtcactgtgcagtgaggccaccgaggagggccggcactgcatggaacaggcc
tgttcagcctgtgaccttacctgccccatgggcaaggcaaatgctgagtgtgacgcgtgc
atgtgtcaggacttcgtgctgtatggggctgtctccctccctgggggtgccccagcctca
ggggctgctgtctacctcctgagcaagacacctaagctactgacccagacggacagcagt
ggaaggttccgagtccctgggttgtgccccgatggcaaaagcatcctgaagatcacaaag
accaagtttgcacctatccacctcacggtgcctaagactagactgaaggcagccaccatc
agggcggagttcgtgagggcagaaacgccgtacattgtgatgagccctgagacaaaagca
cgaagagctgggcagagcgtgtccctgtgttgtaaggccacagggaagcccagaccagac
aagtatttctggtaccataacaacacactgttggacccctccctctacaagcacgacagc
aagctggtgctgaggaatctgcggcgggaccaagccggggagtacttctgcaaggcccag
accgatgctggggctgcaaagtcccgcattgcccagctgactgtcatagcctctgatgag
attccttgcaacccaacccctgagagctaccttatccagctgccccatgactgtttccag
aatgccaccaactccttctactatgatgtgggtcgttgccctgtcaagacctgtgcaggg
cagcaggataatgggatcaggtgccgagatgctgtggagcactgctgtgggatctccaaa
acagaggagagggagatccagtgcagcgggtacacgctgcccaccaaggtggccacggag
tgcagctgccagcggtgtacggagactcggagaatcgtgcggggccgggtcagcgcagcc
gacaacggggaacccctgcgcttcggccacgtgtacatggggaacacccgtgtgagcatg
acgggctacaagggcacattcactctgcatgtccctcaggacacagagaggctggtgctc
acgtttgtggacaggatgcagaagttcgtcaacaccaccaaagtgctgcccttcaataag
aaggggagtgccgtgttccatgagatcaagatgcttcggcggaaagagcccatcaccttg
gaggccatggagacaaacattatccccttgggggatatggctggtgaagaccctgtggct
gagctggagatcccatccaagagtttctaccggcagaacggggagccctacatgggaaaa
gtaaaggccagtgtgaccttcctggatccccggaatatttccacagctactgctgcccag
agtgacctgaacttcatcaatgatgaaggagacactttccctcttcggacatatggcatg
ttctctgtggacttcagagatgaagccacctcagagtcccttaatgttggcaaggtgaag
gttcatcttgactcgacccaggtcaagatgccagagcatgtgcccatgatgaaactctgg
tcgctcaacccagacacagggctgtgggaggaagaaggtgacttcaaacctgaaagccaa
aggcggaacagaagggaagacaggaccttcctggtgggcaacatggagatccgtgagagg
aggctttttaacctggatgtcccggaaagcaggaggtgcttcatcaaggtgagggcctac
aggagtgagaggttcttgcccagtgagcagatccagggggttgtggtatctgtgatcaac
ctggagcccaggactggcttctcctccaaccccagggcctggggccgctttgacagtgtc
ctcacgggtcccaatggggcctgcctgcctgccttctgtgatgaccagtcccctgatgct
tactctgcctatgtcttggccagcctggctggggaagaactggaagcagtggagtcttct
cctaaattcaacccaaatgcaattggtgtccctcagccttacctcaacaagctcaagtac
cgccggacagaccatgaggacccacgggtcaagaagacggctttccagatcagcatggcc
aagccacggcccaactcacctgaggagggcaatggacccatctatgcatttgagaacctc
cgggaatgcgaggacgcaccacccagtgcggcccatttccggttctaccagattgagggg
gatcggtatgactataacacagtccctttcaacgatgatgaccccatgggctggactgaa
gactacctggcatggtggcccaagccaatggagttcagggcttgctacatcaaggtgaag
attgtggggccactggagataaatgtgcgatcccgtaacatggggggcacccaccggcgg
acagtgggaaggctgtacggaatccgggatgtgaagagcacacgggacagggaccagccc
aacatctcctctgcctgtttggagttcaagtgcagtgggatgctctatgaccaggaccgt
gtggaccgcacgctggtgaaggtcatcccccagggcagttgccaacgagccagtgtaaac
tctatgctgcatgagtacctggtcaaccacctaccgctggcggtcaacaacaacaccagt
gagtataccatgctggcgcccttggacccactgggccacaactatggcatctacactgtc
actgaccaggaccctcgcacagccaaggagattgcgctcggccggtgctttgatggcaca
tccgatggctcctccagagtcatgaaggccaatgtgggagtggccctcacctttaactgc
gtagagaggcaggtgggccgtcagagtgccttccagtacctccagaacaccccggcccag
ccctcccctgcaagcactgtcaggggaagagtgccctcaaggaggcagcgggcaagtcag
ggtagccagcgtggaggggtggcctctctgaggtttcctggggctgctcagcagcctctg
agcgactga
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integrated database retrieval system
