Bubalus bubalis (water buffalo): 102415705
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Entry
102415705 CDS
T05912
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X4
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04010
MAPK signaling pathway
bbub04020
Calcium signaling pathway
bbub04713
Circadian entrainment
bbub04925
Aldosterone synthesis and secretion
bbub04927
Cortisol synthesis and secretion
bbub04929
GnRH secretion
bbub04934
Cushing syndrome
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102415705 (CACNA1H)
04020 Calcium signaling pathway
102415705 (CACNA1H)
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
102415705 (CACNA1H)
04925 Aldosterone synthesis and secretion
102415705 (CACNA1H)
04927 Cortisol synthesis and secretion
102415705 (CACNA1H)
09159 Environmental adaptation
04713 Circadian entrainment
102415705 (CACNA1H)
09160 Human Diseases
09167 Endocrine and metabolic disease
04934 Cushing syndrome
102415705 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
bbub04040
]
102415705 (CACNA1H)
Ion channels [BR:
bbub04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
102415705 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
TMEM208_SND2
Motif
Other DBs
NCBI-GeneID:
102415705
NCBI-ProteinID:
XP_044792328
LinkDB
All DBs
Position
24:complement(41201940..41260288)
Genome browser
AA seq
2361 aa
AA seq
DB search
MTEGVQAADEVRVPLGAPAPGPAAAAASPASPGAPGPEAERGSGPSASPPESPAAERGAE
LGADEEQPVPYPALAATVFFCLGQTTRPRSWCLRLVCNPWFEHVSMLVIMLNCVTLGMFR
PCEDVECRSERCGILEMVIKMIALGLFGQKCYLGDTWNRLDFFIVMAGMMEYSLDGHNVS
LSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWAG
LLRNRCFLDSTFARNSNLSFLRPYYQPEEGEENPFICSSRRDNGMQKCSHIPSRRELRVE
CTLGWEAYGQPQAEGAGGTGHHTCINWNQYYNVCRSGDSNPHNGAISFDNIGYAWIAIFQ
VITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRENQLM
REQRARYLSNDSTLASFSEPGSCYEELLRYVGHVCRKLKRRGLRLYARWQSRWRKKVDPG
GAVHGQGSGRRPRRAGGRTASIHHLVYHHHHHHHHHYHFSHGSPRRPGPEPGAGDTRLVR
AGAPASPGRGPPDAESVHSVYHADCHVEGPQERARVAHAAATAAAGLKLAAGLGAMNYPT
ILPSAAGSGKSGLGPKGKRPGGPPGAGGHSPLRLSSPDPCEKIQHLVGEHGLGQAPSRLS
GLSVPCPLPSPQAGTLTCELSSCPYCTSALEDPELEFSDSDSGDSDSNGVYEFTQDVRHG
DHRDPMQSPPVAEAPGAGGTRRRGPRRAVAGEQGGLGRVWASFSGKLRRIVDSKYFNRGI
MVAILTNTLSMGVEYHEQPDELTNALEISNIVFTSVFALEMLLKLLACGPLGYIRNPYNI
FDGIIVVISVWEIIGQADGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFC
MLLMLFIFIFSILGMHLFGCKFSLKTDTGDTIPDRKNFDSLLWAIVTVFQPGPCPGAPSA
HTLGPLCPPLLPQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVE
GFQAEGDATRSDTDEDKTSTHLEEDLDKFRDLRATEMKMYSLAVTPNGHLEGRGSLPPPL
IMRTAATPMPTPKSSPHLDAAPGPLDSRRGSSSSMDPQLGDQKSLSSLRSSPCSPWGPNS
AWSSGRSSWNSLGRAPSLKRRSQCGERESLLSGEGRGSGSTDEEAEDGRPGAGASPGARA
TPLRRTESLDHRSTLDLRPPRPATLLPTKVHDCNGQVLALPSEFFLRIDSHKEDPAEFDD
DVEDSCCSRLQKVLEPHKPECCRSREPWALYLFSPQNRFRISCQKIIAHKMFDHVVLVFI
FLNCITIALERPDIDPGSTERVFLSVSNYIFTAIFVAEMMVKVVALGLISGEHAYLQSSW
NILDGVLVLVSLVDIIVAMASAGGAKILGILRVLRLLRTLRPLRVISRAPGLKLVVETLI
SSLRPIGNIVLICCAFFIIFGILGVQLFKGKFYYCEGTDTRNISTKAECRAAHYRWVRRK
YNFDNLGQALMSLFVLSSKDGWVNIMYDGLDAVGVDQQPVPNHNPWMLLYFISFLLIVSF
FVLNMFVGVVVENFHKCRQHQEAEEARRREEKRQRRLERKRRSTFPNPEAQRRPYYADYS
PTRRSIHTLCTSHYLDLFITFIIGVNVITMSMEHYNQPKALDEALKYCNYVFTIVFVVEA
VLKLVAFGFRRFFKDRWNQLDLAIVLLSIMGITLEEIEMNAALPINPTIIRIMRVLRIAR
VLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGRLECSEDNPCEG
LSRHATFSNFGMAFLTLFRVSTGDNWNGIMKDTLRECAREDKHCLTYLPAISPIYFVTFV
LVAQFVLVNVVVAVLMKHLEESNKEAREDAELDAELEMEMAQGSPARPRPAAPHSPGASP
DSPNVLVVRKVSVSRMLSLPNDSYMFRPVAPAAAAHPHPLQEVEMETYAGAAAGQVTAAH
SPPVESCASLQVPSAVSSPSRVGDTLRALPSQGAARSPSVGRLLCRQEAIHTESLEGHVD
GTGDSSPFWGEPGGKTPVRQASLGPSLRSPPRSPRPSSIRTRKHTSGQHCISSRPPAPGG
EESEAPDPADEEVSHITSSARSPLASPTACGIVGGEPDLHRLYSVDTRGFLDQPGRVDEQ
RRPLGEPGVGDSRPEAGEVKPRVLEAELALGARRKKKMSPPCISIEPPAEDEGAARAPAA
EGGSTTLRRRTPSCEAVPHRDPLEPTDGSGLDAAAKGERRGQGPCRTEHLTVPNFTFEPL
DVGSPSGDLFTDGGHGAAPEPRPSSSGTTAPPEPREMESPVPSGDPPEEGRGVHLTVPES
PPKRASPPAVPVPGDTVDEPV
NT seq
7086 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagggcgtgcaggcggccgacgaggtccgcgtgcccctgggcgcgccagccccg
ggcccggcggcggcggcggcgtccccggcgagccctggggccccggggccagaggcggag
cgggggtcggggcccagtgcgtcgccccccgagagtccggcggccgagcgcggcgcggag
ctgggcgccgacgaggagcagcccgtcccgtacccggcgctggcggccaccgtcttcttc
tgtctcgggcagaccacgcggccgcgcagctggtgtctccggctggtctgtaacccgtgg
ttcgagcacgtcagcatgctggtcatcatgctcaactgcgtgaccctgggcatgttccgg
ccctgcgaggacgtcgagtgccgctcggagcgctgtggcatcctggagatggtcatcaag
atgatcgccctggggctgtttgggcagaagtgctacctgggtgacacgtggaacaggctg
gacttcttcatcgtcatggcgggtatgatggagtactccttggacggacacaacgtgagc
ctctcggccatccgaaccgtgcgcgtgctgcggccccttcgtgccattaaccgtgtgccc
agcatgcggatcctggtcacgctgctgctggacacactgcccatgctcggcaacgttctc
ctgctctgcttctttgtcttcttcatcttcggcatcgtgggcgtccagctttgggccggc
ctgctgcgcaaccgctgcttcctggacagcaccttcgccaggaacagcaacctcagtttc
ctgcggccgtactaccagccggaggagggcgaggaaaacccattcatctgctcctcccgc
cgggacaacggcatgcagaagtgctcgcacatccccagccgccgcgagctgcgcgtggag
tgcacgctgggctgggaggcctacgggcagccgcaggccgagggcgcaggtggcacgggt
caccacacctgcatcaactggaaccagtactacaacgtgtgccgctcgggcgactccaac
ccgcacaacggggccatcagcttcgacaacatcggctacgcctggatcgccatcttccag
gtgatcacgctggagggctgggtggacatcatgtactacgtcatggatgcccactccttc
tacaacttcatctacttcatcttgcttatcatcgtgggctccttcttcatgatcaacctg
tgcctggtggtcatcgccacgcagttctcagagacgaagcagcgggagaaccagctgatg
cgggagcagcgggcccgttacctgtccaatgacagcacgctagccagcttctctgagccg
ggcagctgctatgaggagctcctccggtacgtgggccacgtgtgccgcaagctaaagcgc
cgtggcctccgcctctacgcccgctggcagagtcgctggcgcaagaaggtggaccccggt
ggcgccgtgcatggccagggctcaggccggcggccgcggcgggcaggcgggcgcaccgcc
tccatccaccacctcgtgtaccaccaccaccaccatcaccaccaccactaccacttcagc
cacggcagcccccgccggccaggccccgagccaggagccggcgacaccaggctggtgcgg
gccggagcgccagcctcgcccgggcgcgggccccctgacgccgagtcggtgcacagtgtg
taccacgctgactgccacgtggaggggccgcaggagagggcgcgcgtggcgcacgccgca
gccactgctgctgctgggctcaagctggccgccgggctgggagccatgaactaccccacc
atcctgccctcagctgcgggcagtggcaaaagcggcctcgggcccaaggggaagcggcct
ggtggccccccgggagccggggggcacagccccctgaggctgagcagcccggatccctgc
gagaagatccagcacctggttggggagcatggactgggccaggcccccagccgcctgtca
ggcctgagtgtgccctgccccctgcccagcccccaggcgggcacgttgacctgtgagctg
agcagctgcccgtactgcaccagtgccctggaggaccccgagctggagttcagcgactca
gacagtggagactcagacagcaatggggtctacgagttcacgcaggacgtgcggcacggg
gaccaccgcgaccccatgcagtcgccccctgtggcagaggcaccaggcgcaggcggcaca
cggcggagggggccgcggcgggcagtggcaggcgagcagggtgggctgggccgcgtctgg
gcctccttcagcggcaagctgcgccgcatcgtggacagcaagtacttcaaccggggcatc
atggtggccatcctcaccaacacgctgagcatgggtgtcgagtaccacgagcagcccgat
gagctgaccaacgccctggagatcagcaacattgtgttcacaagcgtgtttgctctggag
atgctgttgaagctgctggcctgcggcccactgggctacatccggaacccctacaacatc
tttgacggcatcatcgtggtcatcagcgtgtgggagatcatcgggcaggcggacggcggg
ctatcggtgctgcgcaccttccggctgctgcgggtgctcaagctggtgcgcttcatgccc
gcgctgcggcgccagctggtggtgctcatgaagaccatggacaacgtggccaccttctgc
atgctgctcatgcttttcatcttcatcttcagcatccttggcatgcatctcttcggctgc
aaattcagtctgaaaacagataccggagacacaatccctgaccggaagaactttgattcc
ctactgtgggccatcgtcaccgtgttccagccaggaccctgtcctggtgccccctcggcc
cacacgttgggcccactctgcccgccgctcctcccccagatcctcacccaggaggactgg
aacgtcgtcctgtacaacggcatggcctccacatcctcctgggccgccctgtacttcgtg
gccctcatgacctttggcaactatgtgctcttcaacctgctggtggccatcctggtggag
ggtttccaggccgagggcgatgccaccaggtccgacacagatgaagacaagacatccacc
cacttggaggaggacttggacaagttccgagacctcagggctacagagatgaagatgtac
tcgctggcagtgacacccaacgggcacctggagggccggggcagcctgccccctcccctt
atcatgcgcacggcggccacgcccatgcccacccccaagagctccccacacctggacgcg
gcccctggccccctggactcacgccgtggcagcagcagctccatggaccctcagctagga
gaccagaaatctctgtccagcctccgcagctcgccctgctccccctgggggcccaacagt
gcctggagcagcgggcgctccagctggaacagcctgggccgtgcacccagcctcaagcgc
aggagccagtgtggggagcgcgagtcgctgctgtccggtgagggcaggggcagcggcagc
actgacgaggaggccgaggatggccggcccggggcgggggcctcgccgggtgcgcgtgcc
acgccgctgcggcgcaccgagtccctggaccaccgtagcacactggacctgcggccccca
cggccggccaccctgctgcccaccaaggtccacgactgcaacgggcaggtgctggccctg
ccgagcgagttcttcctgcgcatcgacagccacaaggaggatccggccgagtttgatgac
gatgtggaggacagctgctgctcacggctgcagaaggtgctggagccgcacaagccggag
tgctgccggagccgcgagccctgggccctgtacctcttctccccgcagaacaggttccgc
atctcctgccaaaagatcattgctcacaagatgttcgatcacgtcgtcctcgtcttcatc
ttcctcaactgcatcaccatcgccctggagaggcccgacatcgaccctggcagcactgag
cgggtcttcctcagcgtctccaactacatcttcacagcgatcttcgtggcggagatgatg
gtgaaggtggtggccctgggcctcatctcgggcgagcatgcctacctgcagagcagctgg
aacatactggatggggtgctggtcctggtgtccctggtggacatcatcgtggccatggcc
tcggctggcggcgccaagatcctgggcatcctgcgtgtgctgcgcctgctgcggaccctg
cggccgctgagggtcatcagccgtgcgccgggactcaagctggtggtggagactctgata
tcgtccctcaggcccatcgggaacatcgtcctcatctgctgcgccttcttcatcatcttc
ggcatcctcggggtgcagctcttcaaggggaagttttactactgcgagggcaccgacacc
aggaacatttccactaaggccgagtgcagggccgcgcactaccgctgggtgcgacgcaag
tacaacttcgacaacctgggccaggcgctgatgtcgctgttcgtgctctcgtccaaggac
ggctgggtgaatatcatgtacgacgggctggacgccgtgggcgtggaccagcagcccgtg
cccaaccacaacccctggatgctgctctacttcatctccttcctgctcatcgtcagcttc
ttcgtgctcaacatgttcgtgggtgtcgtggtggagaacttccacaagtgccggcagcac
caggaggccgaggaggcgcggcggcgcgaggaaaagcggcagcgtcgcctggagaggaag
cgcaggagcactttccccaacccagaggcccagcgacggccctactatgcggactactcg
cccacccgccgctccatccacactctgtgcaccagccactacctggacctcttcatcacc
ttcatcattggcgtcaacgtcatcaccatgtccatggagcactacaaccagcccaaggct
ctggacgaggccctcaagtactgcaattacgtgttcaccatcgtctttgtcgtcgaggcc
gtgctgaagctggtggcctttgggttccggaggttcttcaaggacaggtggaaccagctg
gacctggccatcgttctgctgtccattatgggcatcacgttggaggagatcgagatgaac
gcagcgctgcccatcaaccccaccatcatccgaatcatgcgtgtcctccgcatcgcccgc
gtcctgaagctgctcaagatggccacgggcatgcgggccctgctggacacggtggtccag
gcgctgccccaggtagggaacctcggcctgcttttcatgctcctgttttttatctatgct
gccctgggagtggagctgttcgggaggctagaatgcagtgaggacaacccctgcgagggc
ctgagcagacacgccaccttctctaacttcggcatggccttcctcacgctgttccgcgtg
tccaccggggacaactggaacgggatcatgaaggacacgctgcgcgagtgcgcccgcgag
gacaagcactgcctcacctacctgccggccatctcgcccatctacttcgtcaccttcgtg
ctggtggcccagttcgtgcttgtcaacgtggtggtggccgtgctcatgaagcacctggag
gagagcaacaaggaggcccgcgaggacgccgagctggacgcagagcttgagatggaaatg
gcgcaggggtcccccgcccgtcccaggccggctgcccctcacagccccggcgcctcgccg
gactcccccaacgtgctggtagtgcgcaaggtgtcggtgtccaggatgctatccctgccc
aacgacagctacatgttccggcccgtggcgcctgcggcagccgctcacccccacccacta
caggaggtggagatggagacctacgcgggcgcggccgcgggccaggtcaccgctgcccac
tcgccgcctgtggagtcctgcgcctccctccaggttccgtccgccgtgtcctccccgtcc
agggtcggtgacaccctccgtgccctgccctcgcagggtgcagcccggtcgcctagtgtc
ggccggcttctctgcagacaggaggccatccacacggagtccctggaagggcatgtcgat
ggcactggggacagcagcccattctggggagagcctggcgggaagacccccgtgagacag
gcatccctggggccctccttgcggtccccaccccggtccccgcggccctccagcatccgc
acccgcaagcacacttctggacagcactgcatctccagccggcctcctgccccaggcggg
gaggagtccgaagccccagacccggctgacgaggaggtcagccacatcaccagctctgcc
cgcagccctttggcctcgcccactgcctgtgggatcgtgggcggcgagccagacctgcac
aggctctacagcgtggacacccggggcttcctggaccagccgggccgggtggatgagcag
aggcggcccttgggggagccaggagttggggacagccgtccagaggccggggaggtgaag
ccccgggtcctggaggccgagctggccctgggggcccgcaggaagaagaagatgagcccc
ccctgcatctccatagagccccccgcggaggacgagggtgcagccagggcccctgcggca
gagggcggcagcaccaccctgcggcggcgaaccccgtcctgcgaggctgtgccccacaga
gaccccctggagcccacagacggctcagggctggacgctgctgccaagggggagcggcgg
ggccagggcccctgccgcacagaacacctgacggtcccgaacttcacctttgagccgctg
gacgtggggagccccagtggggacctgttcacagatgggggccatggggccgccccagaa
cccagaccctcctcctcaggcaccacggcccctccagaaccccgggagatggagtcccca
gtgccctcaggagaccccccagaggaggggcggggggtgcacctcaccgtcccggagagc
ccaccgaagagagcatcccccccggctgtgccagtcccgggtgacaccgtggatgagccc
gtgtag
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