Bubalus bubalis (water buffalo): 102415878
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Entry
102415878 CDS
T05912
Symbol
OTX1
Name
(RefSeq) homeobox protein OTX1
KO
K09326
homeobox protein OTX1
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
102415878 (OTX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbub03000
]
102415878 (OTX1)
Transcription factors [BR:
bbub03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
102415878 (OTX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
Motif
Other DBs
NCBI-GeneID:
102415878
NCBI-ProteinID:
XP_006075668
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Position
12:61070218..61077209
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AA seq
355 aa
AA seq
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MMSYLKQPPYGMNGLGLAGPAMDLLHPSVGYPATPRKQRRERTTFTRSQLDVLEALFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSGSGTKSRPAKKKSSPVRESSG
SESSGQFTPPAVSSSASSSSSASSASANPAAAAAAGLGGNPAVAVPSSLSTPAASSIWSP
ASISPGSAPASVSMPEPLAAPSNASCMQRSVAAGAASAAASYPMSYGQGGSYGQGYPAPS
SSYFGGVDCSSYLAPMHSHHHPHQLSPMAPSSMASHHHHHPHAHHPLSQSSGHHHHHHHH
HHQGYGGSGLAFNSADCLDYKEPGAAAASSAWKLNFNSPDCLDYKDQASWRFQVL
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttacctcaaacaacccccatatggtatgaatgggctcggtctagccgggcca
gccatggacctcctacacccctccgtgggctatccggccaccccgcggaagcagcgacgc
gagcgcaccaccttcacgcgctctcaactggacgtgctcgaggcgctcttcgccaagact
cgctacccagacatcttcatgcgcgaggaggtggcgctcaagatcaacctgccagagtcc
agagttcaggtctggttcaagaaccgccgcgccaaatgccgccagcagcagcagagcggg
agtgggaccaagagccgcccagcaaagaaaaagtcgtccccggtgcgggagagctcgggc
tctgaaagcagcggccagttcacgccgcctgctgtgtccagttccgcctcgtcctccagc
tccgcatccagcgcctcagccaaccccgcggcggccgcggctgcaggcctgggcgggaac
ccggcggtggcggtcccgtcgtcgttgagtacacctgctgcttcctccatctggagtccg
gcctccatctcgcccggctcagcgccggcttcagtgtcgatgcccgagcctttggctgca
cccagcaacgcatcgtgtatgcagcgctcggtagccgcaggagccgcctcggccgcagcc
tcctatcccatgtcctacggccagggcggcagctacggccagggctaccccgcgccctcc
tcatcctactttggcggcgtggactgcagctcgtatttagcgcccatgcactcgcaccac
cacccgcaccagctcagccctatggcaccctcctccatggcgagccaccatcaccaccat
ccccacgcacaccacccgctgagccagtcctcaggccaccaccaccaccaccatcaccac
caccaccagggctacggcggctcggggctcgccttcaactctgccgactgcttggattat
aaggagcctggcgctgccgccgcatcctctgcttggaaactcaacttcaactcgcctgac
tgtctggactataaggaccaagcctcatggaggtttcaggtcttgtga
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