Bubalus bubalis (water buffalo): 102415904
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Entry
102415904 CDS
T05912
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like
KO
K15544
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:
3.1.3.16
]
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
102415904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bbub03021
]
102415904
03019 Messenger RNA biogenesis [BR:
bbub03019
]
102415904
Enzymes [BR:
bbub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
102415904
Transcription machinery [BR:
bbub03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
102415904
Messenger RNA biogenesis [BR:
bbub03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
102415904
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssu72
Motif
Other DBs
NCBI-GeneID:
102415904
NCBI-ProteinID:
XP_044793172
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All DBs
Position
X:complement(119647259..119648033)
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AA seq
232 aa
AA seq
DB search
MLPLLQLPLQGVEATILLLWKQQESRRESSELGVLVSEATVMPSLSLRLTVVCWNNQNRS
MEVHDILSKXGFSVRSXRTGTNVKLSGPARDRPNIYDFRTTYDEMYKDLLRKDKELYMQN
GVLWMLERNKSIKPRPERFQDCKDPFDLILSWEERVYDQVLEDMNSGEQETCQPVHVINV
DTHKEATLGAFLICDLCQCIQLMGDMEDGIGKLLQVFKETSGRSFLHTVCFY
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgttgccgctgctgcagcttccacttcagggcgtcgaggccaccatcttgcttttatgg
aagcagcaggagtccagacgcgaaagttctgagctgggagtcttggtgagtgaagccaca
gtcatgccatctttgtcactgcgcctcactgtggtatgctggaacaaccagaaccggagc
atggaggtgcacgacatccttagcaaatgaggattcagtgtccggtcctgaagaacagga
acaaacgtgaagctttcaggaccagcacgcgacaggccaaacatttatgatttcagaacc
acgtatgacgagatgtacaaagaccttcttaggaaagacaaagaactctatatgcagaat
ggcgttttatggatgctggaaagaaataagagtatcaagcccaggccagagaggttccag
gactgcaaagatccttttgacctcatcctctcctgggaagagcgagtgtatgaccaggta
ctggaagatatgaattccggggagcaggagacctgccagcctgtgcatgtgatcaacgtg
gacacccacaaagaggctacgctgggagcattcctcatctgcgacctgtgccagtgcatc
cagctcatgggggacatggaggacgggatcggcaagctgctgcaggtgttcaaggaaacg
agtggcaggagcttcctgcacaccgtctgcttctactga
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