Bubalus bubalis (water buffalo): 102416054
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Entry
102416054 CDS
T05912
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X3
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
bbub03036
]
102416054 (CHD7)
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102416054 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Chromo
Helicase_C
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Motif
Other DBs
NCBI-GeneID:
102416054
NCBI-ProteinID:
XP_025121145
LinkDB
All DBs
Position
15:complement(55690416..55881048)
Genome browser
AA seq
2988 aa
AA seq
DB search
MADPGMMSLFGEDGNIFNEGLEGLGECGYPENPVNPMGQQMPIDQGFASLQPSLHHPSTN
QNQSKLTHFDHYNQYEPQKMHLMDQPNRMLSNAPGNGLASPHSQYHTPPVPQVPHGGGGG
GGGGGQMGVYPGLQNERHGGQSFVDGSSMWGPRAVQVPEQIRAPYQPPPPPPQPQPAPSG
PPGQGHPPHLQQLGGYLARGDFSMPQHGQPQPRMGQFPPGQEGLSQGNPFIAGPGPGHLS
HGPPQSPGVAPSLRHAVQPFHHHPPTALHGDSVAHSPRFSPNPAPQGAVRPQTLTFSSRS
QTVPSPTINNSGQYSRYPYSNLNQGLVNSTGMNQNLGLTNSAPLNQSVPRYPSAVGFPPG
SAPGLLHQQPVHPSGSLNQMNAQTMHPSQPQGSYASPPPMSPLKAMSSSAAGTPPPQVRP
GSAPMDVGGYPSMPHQQPAHQPPGGALGLGPRSLGPRSLPPARPFLGMSPAPHLRPNGCP
GVSLADPQAVQDRLLPGQQHPGPQPAFQQLPSCPPLQPHPGLHHQSSPPHPHHQPWAQLH
PSPQSTPQKVPVPQHSPSEPFLEKPVPDMTQVSGPNAQLVKSDDYLPSIEQQPQQKKKKK
KNNHIVAEDPSKNFGKDDFPGGVDNQELNRNSLDGSQEEKKKKKRPKAKKDPKEPKEPKE
KKEPKEPKTPKAPKIPKEPKEKKVKTATPKPKSSKKSSNKKPDAEASALKKKVNKGKTEG
SENSDLDKTPPPSPPPEDDEDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADAAGRD
SPSTTSQSEPQESVDADGPVVEKIMSSRSVKKQESGEEVEVEEFYVKYKNFSYLHCQWAS
IEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVDRIMDFARSTDDRGEPVT
HYLVKWCSLPYEDSTWELRQDIDQAKIEEFEKLMSREPETERVERPPADDWKKSESSREY
KNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLVI
APLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIIT
TFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVE
ELFSLLHFLEPTRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPKE
ETIIEVELTNIQKKYYRAILEKNFAFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGAE
EKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDIL
EDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCI
IFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSM
SGRENAPNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTITIES
EGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRKQT
RLYSAVKEDELMEFSDLESDSEEKPCTKPRRPPDRSQGYARSECFRVEKNLLVYGWGRWT
DILSHGRYKRPLSEQDVETICRTILVYCLNHYRGDENIKSFIWDLITPTADGQTRALVNH
SGLSAPVPRGRKGKKVKAQSSHPVVQDADWLAGCNPDALFQEDSYKKHLKHHCNKVLLRV
RMLYYLRQEVIGDQAEKILEGADSSEADVWIPEPFHAEVPTDWWDKEADKSLLIGVFKHG
YEKYNSMRADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYKPTRT
PFKDEIDEFANSPPEDKEEPMEIRAPGKHSEGSTELGQLYWPSTSTLTTRLRRLITAYQR
SYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIISEKRQKWTRREEADFYRVVSTFG
VIFDPAKQQFDWNQFRAFARLDKKSDESLEKYFSCFVAMCRRVCRMPAKPDDEPPDLSSA
IEPITEERASRTLYRIELLRRIREQVLHHPQLAERLKLCQPSLDLPEWWECGRHDRDLLV
GAAKHGVSRTDYHILNDPELSFLDAHKNFAQARGAGGAPALNPLALGFGQTPAATPAAPG
QEDKAGAAEAKAREASEKPEGKEEEEAEGSGKDQRQDREAELGAGKSEPRGVEVGVDSGP
KSISEKGSEEDEEEKLEDDDKSEESSQPEAGAVSRGKNFDEESNASMSTARDETRDGFYM
EDGDPSVAQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRRQMFDFQGLIPGY
TPPTADSPLQKRSLAELSAVGQASISGSEELTASPQLSKDDALNLSVPRQRRRRRRKIEI
EAERAAKRRNLMEMVAQLRGSQVVSENGQEKVVDLSKASREAASSTSNFSSLTSKLVLPN
VSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLVDGEPPMKRRRGRRKNVEGLDLLFMSH
KRTSLSAEDAEVTKAFEEDIETPPTRNIPSPGHLDPDTRIPVINLEDGTRLVGEEAPKNK
DLVEWLKLHPTYTVDMPSYVPKNADVLFSSFQKPKQKRHRCRNPNKLDINTLTGEERVPV
VNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTDIVKQSGFVPESMFDRLLTGPVV
RGEGASRRGRRPKSEIARAAAAAAAVASTSGINPLLVNSLFAGMDLTSLQNLQSLQSLQL
AGLMGFPPGLATAAAAGGDAKNPAAVLPLMLPGVAGLPSMFGLGGLLNAPLSATAGSPAA
TAGPTDPEDGASRAEEKGGEHEDESKDPEKSTEAAPGPDSANGSVGAATGPAGLPSNPLA
FNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPALAGLQGAVGAGEDKAPDKAEGAAFQE
DEPLEGSDAEESLDKTAESSVLEDEIAQGEELDSLDGGDEMENNENDE
NT seq
8967 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccaggaatgatgagtctttttggcgaggacgggaatattttcaatgagggc
ctcgaaggcctgggcgaatgtggttaccctgaaaaccccgtgaaccccatgggtcagcag
atgcctatagaccaaggcttcgcctccctgcagccttccctccaccatccctccaccaac
cagaatcaaagcaagctgacccacttcgatcactataaccagtacgagccgcagaagatg
cacctgatggaccagcccaacagaatgctgagcaatgcccccgggaacggactggcgtct
cctcactcgcagtaccacacccctcccgtcccccaggtcccccacggaggtggcgggggc
ggcggcggtggcggccagatgggcgtctacccgggcctgcagaacgagaggcacgggggc
cagtcctttgtggacggcagctccatgtggggcccccgggccgtgcaggtgcccgagcag
atccgagccccctaccagccgccgccgccgcctccgcagccccagccggccccatcgggg
ccccccgggcagggccaccccccacacctgcagcagctaggcggttacctggcgcggggg
gacttctccatgccgcagcatggccagccgcagccgaggatgggccagtttcccccgggc
caggagggcctgagtcagggaaaccctttcatcgctggccccgggccgggccacctgtcg
cacggccccccacagagccccggggtggccccgagcctgcgccacgcggtgcagcccttc
caccaccaccctcccaccgctctccacggggactcggtggcccacagcccccggttctcc
cccaaccccgctccgcaaggggccgtgaggccgcagaccctcacctttagttctcggagc
cagacagtcccctcacccactataaacaactcagggcagtactcccgctatccttacagc
aacctaaatcagggattagttaacagtacagggatgaaccagaacctaggccttaccaat
agcgctcccctgaaccagtccgtcccgaggtaccccagcgcggtgggattcccgcccggc
agcgccccaggactcctgcaccagcagcccgtccaccccagcggctcactgaaccaaatg
aacgcgcaaactatgcacccttcgcagcctcagggatcgtacgcctccccgcctcccatg
tcacccctgaaagcgatgagcagcagcgcggcgggcacgccgcccccgcaggtgcggccc
ggcagcgcccccatggacgtgggcggctacccgagcatgccgcaccagcagccggctcac
cagccgccaggcggcgccctggggctcggaccgaggagcttgggcccgcggagcctgccg
ccggcgcgcccgttcctgggcatgtccccggccccgcacctgaggcccaacggctgcccc
ggtgtgagcctcgccgacccgcaggccgtccaggaccgcctgctccccggccagcagcac
cccgggccgcagccggccttccagcagctgcctagctgccctccgttgcagccccacccg
ggcctgcaccaccagtcttcacccccgcacccgcaccaccagccttgggcgcagctccac
ccctcgccccagagcaccccgcagaaagtgcctgtgcctcagcattctccatcggagccc
tttctagagaaaccagtgccggatatgactcaggttagtggaccgaacgctcagctagtg
aagagtgatgattacctgccgtcgatagaacagcagccacagcaaaagaagaagaaaaag
aagaacaaccacattgttgcagaggatcccagtaaaaactttggtaaagatgacttccct
ggtggggttgataaccaagaactaaacaggaactcactagacgggtcccaagaagagaaa
aagaaaaagaaaaggccgaaggcaaaaaaagatcccaaggaaccgaaagaacccaaggag
aaaaaagagcccaaggaacccaagaccccgaaagcccctaagattcccaaagagccaaag
gaaaagaaagtaaaaactgccacgccaaaacccaaatccagcaaaaagtcaagtaataag
aaacctgatgcagaagcaagtgctttgaagaaaaaggtcaacaagggaaaaacagaaggt
tctgaaaattcagacttggacaaaacacccccaccatcccctcctcccgaagatgatgaa
gacccaggtgttcagaaacgacggtccagcaggcaagtgaagagaaagcgatacaccgag
gacttggagttcaagatctctgatgaggaggccgatgacgcagatgctgctgggagagac
tccccctccaccacctcacagtcagagccacaggaatctgttgatgcagatggtccagtg
gtagaaaaaattatgagcagtcgttcagtaaaaaaacaggaatccggagaggaggtagaa
gttgaggagttctacgtgaaatataaaaacttctcttatcttcattgtcaatgggcgtcc
atagaagatctggaaaaagataagagaattcagcaaaagattaagcgatttaaggcaaag
caaggccagaacaaattcctgtcagagattgaagatgagctttttaatccagattatgtg
gaggttgaccggataatggactttgcacgtagcacagatgaccggggagagcctgtgact
cactatctggtgaagtggtgctcactgccttatgaagacagcacgtgggagctgaggcag
gacatagaccaagccaagatcgaagagtttgagaagctcatgtcccgggagccagagaca
gagcgtgtggagcgaccccctgctgatgactggaagaaatcggagagttccagggagtat
aaaaacaataacaaactcagggaataccagttggagggagtaaactggctacttttcaat
tggtacaacatgcgaaactgcattttagcagatgaaatgggtttgggaaaaactatccag
tccattacatttctctatgagatatatttgaaaggaatccatggcccttttttagtaatt
gccccattgtccacaatccccaactgggaaagggaattccggacctggacagaattgaac
gtggttgtgtaccatgggagtcaagctagtcgtcggaccattcagttgtatgaaatgtac
ttcaaagatccccagggtcgagtgataaaggggtcatataagttccacgccatcatcact
acatttgagatgattctgaccgattgtcctgagctgcggaatattccctggcgatgtgta
gtcatcgatgaagcccacaggctgaagaacaggaactgcaagctcttggagggactcaag
atgatggacttggaacacaaagtgctgctgacggggaccccgctccagaacacggtggaa
gagctcttcagcttgcttcacttcttagaacccactcgcttcccttcggaaaccaccttt
atgcaagaatttggtgatctgaaaactgaagagcaggtgcaaaaactccaggctattcta
aagccaatgatgttgagacgtctcaaggaggacgtggaaaagaacttggcccccaaagaa
gaaactatcattgaagtggagctaacaaacattcagaagaaatattaccgagccatcctt
gagaagaatttcgcgtttctttccaaaggtggtgggcaagctaacgtgcccaacctttta
aacactatgatggaattacggaagtgctgcaaccacccctaccttatcaatggtgctgaa
gagaaaattttggaagagtttaaagaaacacacaatgccgactctccagattttcagctc
caggcgatgatccaggctgctggcaagctagtgctgattgacaagctgctgccgaagctg
aaggccggtggccatagggtgctcattttctcccagatggtgcgctgcctggacatcctg
gaagactacctcattcagagacggtacccgtacgagaggatcgacggccgggtcagaggc
aacctccgtcaggcagctattgacaggttctccaagcctgactccgataggtttgtgttc
ctcctgtgtacgagggcaggaggcctaggcattaatctcactgctgctgatacctgcatc
atcttcgattctgactggaatccccaaaatgatctccaggctcaggctagatgtcacaga
ataggacaaagcaaatctgtgaagatatacaggctgattaccaggaattcttacgaaagg
gaaatgtttgacaaggccagcctgaagctgggtctggacaaggcagtcctgcagtccatg
agcggacgggagaatgctcccaacggggtacaacagctttccaagaaagaaatagaggat
cttctccggaagggggcctacggtgcgctcatggatgaggaggacgagggctccaagttc
tgcgaagaagacatcgaccagatcctgctccggcggacccacaccatcaccatcgagtcc
gagggaaaaggctccacgtttgctaaggccagttttgttgcatctggaaataggacagat
atttccttggatgatccaaatttctggcaaaagtgggcgaagaaggcagaattggatatc
gatgccttaaatgggaggaacaacctggttattgacactccaagagtgaggaagcaaacc
aggctgtacagcgcggtgaaggaggacgagctgatggaattttcagacctggagagcgac
tcagaggagaagccctgcacaaagccgaggcggccaccagacaggtcccagggctatgcc
aggagcgagtgcttccgagttgagaagaacctgctcgtctatggctgggggcggtggaca
gacatcctctcccatggccgctacaagcgcccgctcagcgagcaggacgtggagaccatc
tgcaggaccatccttgtgtactgcctcaaccactaccggggggacgagaacatcaagagc
ttcatctgggatctcatcacgccaacggctgatggccagacgcgggccctagtcaaccat
tccggtttgtcggcccctgtgcccagggggaggaagggcaagaaggtgaaagcccagagc
tcacacccagtggtgcaggatgccgactggctggctggctgcaacccggacgccttgttc
caggaggacagttacaagaagcacctgaagcaccactgcaacaaggtcctgctgcgtgtc
cgcatgctctactacctgagacaagaagtgataggagaccaggcagagaagatcctggag
ggcgcggactccagtgaagctgacgtgtggatacctgaacctttccacgcagaagtcccc
acagactggtgggataaggaagcagacaagtccctcctcattggcgtgttcaagcacggg
tacgagaagtacaactccatgcgagctgaccccgcgctgtgcttcctggaacgagtcggt
atgcccgatgccaaggccatcgctgccgagcagagaggaacagacatgctagcagatggc
ggtgacgggggagaatttgatagagaagatgaagatccagaatataaaccaaccagaacg
ccgttcaaggatgaaatagatgaatttgcaaattctcctccggaagataaggaagagccc
atggaaatacgtgccccaggcaagcacagcgagggcagcactgagctaggccagctgtac
tggcccagcacctccacgctgaccacccggctacgcaggctcatcactgcctaccagcgc
agctacaagcggcagcagatgcggcaggaggcgctgatgaagacagaccggcggaggcgg
cggcctcgcgaggaagtgcgggccctggaagctgaaagggaggccatcatatcggagaag
cggcagaagtggacgaggcgggaggaggcggacttttatcgagtggtgtccacattcggg
gtcatttttgaccctgcgaagcagcagttcgactggaaccagttccgagcctttgccagg
cttgacaagaagtccgacgagagtctggagaagtacttcagctgctttgtggccatgtgc
cggcgggtgtgtcgcatgcccgccaagccggatgacgagccaccggacctgtcgtcggcc
attgagcctatcacggaggagcgcgcctcccgcacgctgtaccgcatcgagctgctgcgc
aggatccgcgagcaggtgctgcaccacccacagctggctgagcggctcaagctctgccaa
cccagcctggacctgcccgagtggtgggagtgcggccggcacgaccgggacctgctggtg
ggcgccgccaagcacggcgtcagccgcaccgactaccacatcctcaacgaccccgagctc
tccttcctggacgcgcacaagaacttcgcccaggcccggggggcgggcggcgcccccgcc
ctgaaccctctggccctgggctttggccagacccccgctgccaccccagctgccccaggt
caggaggacaaggccggggcagccgaggccaaggccagggaggcctccgagaagcccgag
gggaaggaggaagaggaggctgagggcagcgggaaggaccagaggcaggaccgcgaggcg
gagctgggggctgggaagagcgagcccagaggggtggaggtcggtgtggactctgggccc
aagtccatttctgagaagggttctgaggaggacgaagaggaaaagctggaggatgatgac
aagtcagaagagtcttcccagcctgaagcaggggctgtctctagagggaagaattttgat
gaagagagcaatgcttccatgagcactgctagggatgagacccgggatggattctacatg
gaggatggtgacccatctgtagctcagctccttcatgaaaggacgtttgccttctcattt
tggcctaaggaccgagtaatgataaaccgattagacaacatctgtgaagcagtattgaaa
ggcaaatggccggtaaataggcgccagatgtttgatttccaaggcctcatccccggctac
acgccccccaccgccgacagtcccctgcagaagaggagcctggccgagctgtctgccgtg
ggccaggccagcatcagcgggagcgaggaactcaccgcctcccctcagctgtccaaggac
gatgcccttaacctctctgtgcctcgccagcggaggaggaggaggaggaagatcgaaatc
gaggcggagagagctgccaagcggcgaaacctcatggagatggtggcgcagctgcggggg
tctcaggtggtctcagagaatggacaagagaaagtggtcgatttatcaaaggcctcgaga
gaggcagcaagctctacctcaaacttttcatctctcacttcaaagttggttttgcccaat
gtctccacgccggtgtctgatgcctttaagactcagatggaactgctccaggccggcctg
tcccgcacgcccaccagacatctgctcaatggctccctcgtggacggagagccccccatg
aagcggaggcggggaaggaggaaaaacgtggagggccttgacctgctgtttatgagccac
aaacggacatcactgagtgcagaggatgctgaagtgaccaaagcttttgaagaggatata
gagaccccacctacaagaaacattccttctcctggacacctggacccagacacacggatc
cctgttataaatctcgaagatgggacgaggctggtgggggaggaggcacctaaaaataag
gatttagttgaatggctgaagctgcatcccacttatactgttgatatgccaagttatgta
ccaaagaacgcagatgtgctgttttcctcatttcagaaaccgaaacagaaacgacacaga
tgtcgaaaccctaataaattggatataaacactttgacaggagaagaaagggtgcctgtc
gtgaacaaacgaaatgggaagaagatgggtggagctatggcgcctccaatgaaggatctg
ccccggtggctggaagaaaaccccgagtttgcagtggccccagactggacagacatagtc
aagcagtctggcttcgttcccgagtcaatgtttgaccggcttctcactggacccgtggtg
cggggagaaggggcgagccggcgcggaaggaggcccaagagcgaaatcgcccgggctgcc
gcggcagccgcagcagtggcctccacgtcggggatcaacccgctgctggtgaacagcctg
ttcgcagggatggacctgacgagcctgcagaacctccaaagcctccagtcgctccagctg
gcgggcctcatgggcttccctccgggactggccacggccgcggcggccggaggcgatgcc
aagaacccggcggccgtgctgcccctgatgctgccgggcgtggccgggctgcccagcatg
tttgggctcggggggctgctcaatgccccgctgtccgccaccgccgggagccccgcggcc
acggccggtcccacggatcccgaggacggtgcatccagggcggaggagaagggtggcgag
cacgaggacgagagcaaggacccggagaaaagcacagaagccgccccgggcccagactcc
gcgaacggatcagtgggtgctgctaccggcccggccggcctgccctccaacccgctggcc
ttcaaccccttcctgctgtccaccatggcccccggcctcttctacccgtccatgtttcta
cctccaggactggggggattgacgctgcccggcttccccgcgcttgcggggctccagggc
gccgtgggcgccggcgaagacaaggcccccgacaaagccgagggggccgcctttcaggaa
gacgagccccttgagggcagtgacgccgaggagagcctggacaagacggccgagtcctcc
gttctggaagacgagatcgcccagggcgaagagctggactccctcgacggcggggacgaa
atggaaaacaatgaaaatgacgaataa
DBGET
integrated database retrieval system
