Bubalus bubalis (water buffalo): 102416346
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Entry
102416346 CDS
T05912
Name
(RefSeq) LOW QUALITY PROTEIN: FACT complex subunit SSRP1-like
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bbub03000
]
102416346
03036 Chromosome and associated proteins [BR:
bbub03036
]
102416346
Transcription factors [BR:
bbub03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
102416346
Chromosome and associated proteins [BR:
bbub03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
102416346
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GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
102416346
NCBI-ProteinID:
XP_044780492
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Position
10:32182010..32206995
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AA seq
576 aa
AA seq
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MLCGPLESKATYATRGNNALTHKRLSALSATQNKAKLCTDPDSVRAARHLGHLPQDLRVL
GLSMVVKYASTKDILYSTWNHDIRIYPTFLHLHGKTFDYKIPYTTVLRLFLLPHKDQRQM
FFVISLDPRIKQGQTRYHLLILLFSKDEDISLTLNMNEXEVEKPFEGLLTKNMSGSLYEM
VSRVMKALVNHKIPVPGNFQGHSGAQCITCSYKASSGLLYPLERGFIYVHKPPVHIRFDE
ISLVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNAKKLNIKKRGLKEG
MNPSYDEYANSDEDQHDAYLEWMKGEGKIREENANDSSDDSGEETDESFNPGEEEEDVAE
EFDSNASANSSSNEGNSDQEEKKRKQLEKAKMAKDHKSRKKPLEVKKGKDPNAPKRPMSA
YMLWQNASREKIKSDHPGISITGLSKKVGEIWKGMSKEKKEEWDCKAEDARREYEKAMKE
YEGGRGESSKRDKSKKKKKVKVKMEKKSTPSQGSSSKSSSRQLSESFKSKEFVSSDESSS
GENKXQKKRRRSEDSEEEELASTPPSSEDSASGSDE
NT seq
1729 nt
NT seq
+upstream
nt +downstream
nt
atgctttgtgggcctttggaatctaaggcaacatatgctactcgtgggaacaatgctctg
actcacaaaaggctctcagctttgagtgctacccagaataaggcaaaattatgtacagat
ccagactcagtgagagctgctcggcacttgggccatttgcctcaagatctgagagtgctc
gggttatccatggtggttaaatatgcaagcaccaaggacatactgtatagcacatggaac
cacgacatccgcatctaccccaccttcctgcacctccacggcaagaccttcgactacaag
atcccctacaccacggtgctgcggctcttcctgctgccccacaaggaccagcgccagatg
ttctttgtgatcagcctggacccccgcatcaagcagggtcagactcgctaccacttgctc
atcctgctcttctccaaggatgaggacatctccctgacgctcaacatgaacgaggagagg
tggagaagccctttgaggggctgctcaccaagaacatgtcgggatccctctacgagatgg
tcagccgggtcatgaaagcgctggtgaaccacaagatcccggtcccaggcaacttccaag
ggcactcgggggcccagtgcatcacctgctcctacaaagccagctcagggctgctgtacc
ctttggagcggggcttcatctacgtccacaagccgcccgtgcacatccgcttcgacgaga
tctcccttgtcaacttcgcccgcgggaccaccaccacgcgttcctttgactttgaaattg
agaccaagcagggcacccagtataccttcagcagcattgagagggaggagtacggcaagc
tgttcgactttgtcaacgccaagaagctcaacatcaaaaagcgagggctaaaagagggca
tgaaccccagctacgacgaatacgccaactccgacgaagaccagcacgacgcctacctgg
aatggatgaagggggagggcaagatccgtgaggagaacgccaacgacagcagcgatgact
cgggagaggagaccgatgagtccttcaacccgggtgaagaggaggaggatgtggcagagg
agtttgacagcaacgcctctgccaactcctccagtaacgagggcaacagcgaccaggaag
aaaagaaacggaagcagcttgaaaaggccaagatggccaaggaccacaagagccgcaaga
agcccctggaggtaaagaagggcaaggaccccaacgcccccaagaggcccatgtccgcct
acatgctgtggcagaacgccagccgggagaagatcaagtcggaccatccaggcatcagca
tcacgggcctctccaagaaggtgggtgagatctggaagggaatgtccaaggagaagaagg
aggagtgggattgcaaggctgaggatgccaggagggaatatgaaaaagccatgaaggaat
atgaaggcggccgtggagagtcctccaagagggacaagtccaagaagaagaagaaagtca
aagtgaagatggagaagaaatccacaccctcccagggctcatcatcgaagtcttcatcaa
ggcagctgagcgagagcttcaagagcaaagagtttgtgtccagtgacgagagctcttccg
gagaaaacaagggcaaaagaagagaaggcggagtgaggactccgaagaagaggaactagc
cagtactccacccagctcagaagactcggcatcagggtctgatgaatag
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