Bubalus bubalis (water buffalo): 102416408
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Entry
102416408 CDS
T05912
Symbol
RIF1
Name
(RefSeq) telomere-associated protein RIF1 isoform X2
KO
K11138
telomere-associated protein RIF1
Organism
bbub
Bubalus bubalis (water buffalo)
Pathway
bbub04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
102416408 (RIF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bbub03032
]
102416408 (RIF1)
DNA replication proteins [BR:
bbub03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
102416408 (RIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rif1_N
HEAT_ULK4
Motif
Other DBs
NCBI-GeneID:
102416408
NCBI-ProteinID:
XP_006052181
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All DBs
Position
2:complement(96758758..96816355)
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AA seq
2452 aa
AA seq
DB search
MTAADQSPLAPLLETLEDPSASLGEQTDAYLTLTSRMTGEDGKEIITEIEKKLPQLFEVL
KTHIASQNSELSSAALQALGFCLYNPKIASGLSEINIQELLSKLNDIVKSSDKNVRTRAL
WVISKQTFPTEVVGKVVSSIIDSLEIVFNRGEMHSAVVDYEALNVIIRLIEQAPVQMGEE
SIRWAKLVIPLLVHSAQKVHLRGATALEMGMPLLLQKQQEIASITEQLMTTKLLSELQKL
FMSKNETYVLKLWPLFVKLLGKTLHRSGSFINSLLQLEELGFRSGAPMIKKIAFIAWKSL
IDNFALNPEILCSAKRLKLLMQPLSSIHVRTETLALTKLEVWWYLLMRLGPHLPANFEQV
CVPLIQSTISIDSNASPQGNSSRVATTPGLSPMTPIHKGASPYGTPVTPRMNLNSNFGMA
TIPSIQLLRLEMLLHFLLGPEVVSFAKQNKLILSLEPLEHPLISSSSFFSKHSNTLITAV
HDSFVAVGKDASDVVINAIWKELISLVKSVIESGNKKERPGSEVLTLLLKSLESIVNSEV
FPVLKTLVLMEITIKGLPQKVLGSPAYQGTPALFLVQLIFNNNLLECGVEDERFFLNLET
LVGCVLSGPTSPLAFSDSVLNVVNQNAKQLANKEHLWRMWSIIVTPLTELINQTNEVNQG
DALEHNFSAIYGALILPINHIFPAQKIPMVTMKTLLKTWSELYRAFARCAALVATAEENL
CCEELCSKIMSSLEDEGLSNLLFLDRITHIITVMVDCIDFSPYNIKYQPKTKSPQRPTDW
SKKKKEPLGKLASLIKLIVRVIYSFHTLSLKEVHSDTLLTIGNSITSILSNVFGRISLPS
MIRKIFAALTRPLALFYENSKLDEVPKVYSCMNNKLEKLLGEIIACLHVSYTGTYDSELL
EQISPLLCIIFSHKNKQIRKQSAQFWNATFAKVTMLIYPEELKPILKQAKQKSLLLLPGL
ENVEIMEESSGPYSDMTENSQLNMKISGMERKSSGKRDSFLAQTKDTKDSMKPPAKLQLE
SSTPKAKSEMPLEEEKSTDFVFIPPEVKETKERILTEHQKEVLKTKRCDIPAMYNNLDVS
QDTLFSQYSQEESMEISTLIEKSKEDSKMIFKEEQKENDIVVPQHVMENCGMDEHLEKAS
LLNNECGSIEETSPKILSSNNDARKKALIASSKPTECASTTENPSGVSSSSVSNATISGA
PLQPTSRRQSFITLEKFDGSENRPFSPSPLNNMSSTVIVKSNQEGMAKTDNPSKAKKREV
ALPKSDSEKITHGTKRSSRRLSKSEPIGSKKSKPLMRSEQEKSTQESVDGTIALENNPPG
LLNQTECVLDNQVHLSESTVEYEDTMLESTVENTVLENNTVEERTLEINLESKENTPPAI
ITDQTVNEDSHIQVTPNQKTLRRSLRRRSETAEPTTDSQDKENNHQKREKTPQKSPLHVK
DDVLPKQKLFSEQSVQENLVDKGNNLHEKAFGETSANAEIDENRRKPDLENTKSEGDGVQ
DMADKSSEKPVRGRTRYQTRRASQGLLSSIENSESDSSEAKEEGSKKKRSGKWKNKSSDN
VDIEDQEEKMVKQECIKVENQAHDYKENPEVDKDIKSQIGEKGDESNTVTLQDSTVSPDL
LQVYDDVLSTSEGKSKSNKDADHSFSNPSVPESNLRTRNANKRLHKRDSIENSMGESSKI
GTSDIPLLSEKTLQTVECQHKRSRRVRRSKGCDCCGEKSQSQEKSFIGLKDTENYDVKVN
ETKKTDGETPVSISETSKADLSSEVKLLDEHHSVNFHLDLKEENDTTNDSLIISETELKE
NTTQSFLPSEMVKFKETSRRDSEEAISLETQEPSNKKCKTVDPHLDVSKDISLKCFSLET
KEEKSEAAPKEELSTENIVIVESNAESNPEEVDAMELNVENDQSEAGFSEQKNVKTSISG
KEVTEENSERMDTPEKLKANEAVTEEFNLATDYLDTRTPVKVNAQVEISEQIAVGELGRG
SDESDPGSSEEMNAEMKNCERTAVGEVTTESDHVTETEDEDLTTTASLPIEAETKELDVE
VDRFVPDTLEMITEEGKVDPNKTETNTEPNKLEETQLDDNQMVVESNETLLEVHHTSEKV
EEIAQPLTSETGISGLISEDSNTSPQKLKDIDPLLMSANESPSGMHTRCVWSPLASPSTS
ILKRGLKRPQEDEISSPVHKVRRVSFADPIYQAGLADDIDRRCSIVRCHSSNSSLMVKSV
KTSPTVQSKHNTTSAKGFLSPGSRSSKFKSSKKCLIAEMAKESVPCPTESVYPALVNCVA
PVEIILPQITSNMWARGLGQLIRAKNIKTIGDLSTLTASEIKTLPIRSPKVSNVKKALRI
YHEQQVKSRGLEEIPVFDISEKTINGMENKSISPDEERLASDLIDPVALEAPLSKNLVAQ
ISALALQLDSEDLYNYSGSQLFEMHEKLGSMANSIIKNLQSRWRSPAHENSF
NT seq
7359 nt
NT seq
+upstream
nt +downstream
nt
atgacggccgcggatcagagccccctggcaccgctgttggagactttggaagacccttcc
gcctcccttggagagcagaccgacgcttacctgaccctgaccagtcgtatgactggagaa
gatggaaaagaaatcattacagaaattgagaaaaaacttcctcagctatttgaagtttta
aagactcacattgccagtcaaaactcagagctcagtagtgctgctctacaggccttgggg
ttttgcttatataatcccaaaattgcctctggattatcagagataaatattcaagaactg
ctttcaaaactgaatgatattgttaaaagttcagataaaaatgtacgtactagggcactt
tgggtgatatccaagcagacgtttcccactgaagttgttggcaaagtagtttctagtata
attgactcattagaaatagtatttaatagaggagagatgcattctgctgttgtggattat
gaagcattaaatgtcattataagactaattgaacaagccccagttcaaatgggagaagag
tcaattaggtgggcaaaattggtcatacctttactggttcattcagcccaaaaagtacat
ttgcggggagccactgctttagagatgggaatgcctttgttgcttcagaaacagcaagaa
atagcatctatcacagagcagcttatgactaccaaattactttcagaactccagaaactg
tttatgagtaaaaatgagacttacgtgttaaaattatggcctttatttgtcaaacttctt
gggaagaccttgcatcgaagtgggagtttcattaattctctattacagctagaagaactg
ggatttcgtagtggagcacccatgattaaaaaaatagcttttattgcttggaagagttta
atagataattttgctttaaatccagaaatactatgtagtgcaaaaagactgaagttgttg
atgcagcctttgagttctatccatgtgagaacagaaactctagcgctgacaaaactagaa
gtctggtggtatttgttgatgagactaggacctcatcttcctgctaattttgaacaggtt
tgtgtgcctctgattcaaagcacaataagcattgattctaatgcttcacctcaagggaat
tcatctcgtgtagctactactccaggtttaagccctatgaccccaatacacaaaggtgct
tctccatatggaactcctgtaacccctcggatgaacttgaattcaaattttggaatggcc
acaatcccctctatacaacttttgaggcttgaaatgttgcttcattttttgttgggtcca
gaagtcgtgagttttgctaagcaaaacaaacttatactgagcctagaaccacttgaacat
ccattaatcagcagctcttcttttttctccaaacactcaaatacacttatcactgctgtt
catgatagctttgttgcagttggaaaagatgcttctgatgtagttattaatgctatttgg
aaggagttaattagcttggtgaagtcagttattgaatcaggtaacaaaaaagagagacca
ggttctgaagttttgactctcttattaaaatctttggaaagcatagtgaattcagaagta
tttcctgtattgaaaacactggttctcatggaaattacaattaaaggacttcctcagaaa
gtattaggttctccagcatatcagggaacccctgctttgttcttagttcagttaattttc
aataataatctattggaatgtggtgtggaagacgaaaggttttttctcaacctggaaaca
cttgtgggctgtgttctttctggtccaacttcaccactagctttcagtgactctgtctta
aatgttgtcaatcaaaatgcaaagcagttggccaacaaggagcatctttggagaatgtgg
agtattatagtcaccccattaacagaattgattaatcagaccaatgaagtgaatcaaggg
gatgccttagaacataattttagtgctatctatggtgcactgattttgccaataaaccat
atttttccagcacaaaaaattccaatggtcaccatgaagaccttacttaaaacttggtca
gaattatatagagcatttgctcgctgtgcagctttggtggcaactgcggaagagaattta
tgctgtgaggaactttgttccaagataatgtccagtttggaagatgaaggcctttcaaat
ttattgttcttggataggatcactcatattattactgtaatggttgattgcatcgacttt
tcaccatataatattaaatatcaacccaaaactaaatcaccacagagacctacagattgg
tccaaaaagaagaaggaacctttagggaagttggcttctttaattaaacttattgtgaga
gtgatctattcttttcacacactgagcctcaaggaagtacattctgatactctcctcact
attggcaactcaatcaccagcattctttccaatgtatttggacgtatttctctgccttct
atgatccggaaaatatttgcagctttaacaagacctctggcattattttatgaaaactca
aagcttgatgaagttcctaaagtgtatagttgtatgaacaacaagttagaaaagctacta
ggagaaattattgcttgtctacatgtcagctacactggaacttatgacagtgaacttctt
gaacagatctcgccattattatgcataatattttcacacaagaacaaacagataagaaaa
caaagtgctcagttctggaatgccacatttgctaaagtgacgatgttgatttatcctgag
gagttaaagccaatactaaaacaagccaaacaaaaatctctgcttttattgcctggtttg
gaaaatgttgaaattatggaggaatccagtggaccatattcagatatgacagaaaattcc
caattaaatatgaagataagtggcatggaaagaaaatcaagtggaaaaagagactctttt
ttggcacaaacaaaggatacaaaagacagtatgaaaccaccagctaaattgcagctagag
tcttcaactccaaaagcaaagagtgaaatgcctttagaagaagaaaagtctactgacttt
gtgtttatacctccagaagtaaaagaaacaaaggaaagaatactaactgaacaccagaaa
gaagtactcaaaacaaagaggtgtgatattcctgccatgtataataatctggatgtttca
caagatactttattttctcagtatagtcaggaagaatctatggaaatatctactttaatt
gaaaaatcaaaagaagactccaagatgatatttaaggaggaacaaaaggagaatgacatt
gtcgttcctcaacatgtcatggaaaactgcggtatggatgaacatcttgaaaaggcttcc
cttttgaataatgagtgtggttctattgaggaaaccagtccaaaaatactgagcagtaat
aatgatgccaggaaaaaagctttaattgcttcaagtaaaccaacagaatgtgcatctact
acagaaaatccatctggtgtcagcagtagctcggtttctaatgccaccatttctggagct
cccctacagcctacaagtcgaaggcaatcctttattactttggaaaagtttgatggttca
gaaaatagaccttttagtccgtcacccttgaataatatgtcgtcaactgtaatagtgaaa
agtaaccaggaaggcatggctaaaacagataacccatcaaaagcaaagaaaagagaagtg
gctcttcccaaatctgattctgaaaaaataacacatgggactaagagatcaagccgaagg
ttgagtaaatctgaaccaatagggagtaaaaagtctaaacccttaatgagatctgaacaa
gagaaaagtactcaagaatctgttgatggcacaatagccttagaaaataacccacctggc
ttgcttaatcagacagaatgtgtgttagataatcaggttcatctctctgaatctacagtg
gagtatgaggatacaatgcttgaatcaacagtggagaatactgtattagaaaacaatact
gtagaagagagaaccttagaaattaacttggaatccaaagaaaacacacccccagccata
ataacggatcagacagtaaatgaggatagtcatattcaggtaactccaaatcagaaaact
cttaggcgatctttaaggcgacgttcagaaacagcagaaccaaccactgatagccaagat
aaagaaaataatcatcaaaaaagagaaaagactccgcagaagagtccgttacatgtaaaa
gatgatgttttacctaagcaaaaattgttttctgaacaaagtgtacaggaaaacttagtt
gacaaaggaaataatttacatgagaaggcttttggggagaccagtgctaatgctgaaatt
gatgaaaatagaagaaagccagatcttgagaatactaaatctgaaggagatggtgtgcag
gacatggcagataaatcctctgagaaaccagtaaggggacgaacacgataccaaacgaga
agagcatcccagggtttactttccagcattgaaaactcagaatctgatagttctgaggca
aaagaagaaggttctaaaaagaaaagatctggaaaatggaagaacaaaagcagcgacaat
gttgacattgaagatcaagaagagaaaatggtaaaacaggaatgtataaaagttgaaaat
caggcacatgattataaagagaatcctgaagtagacaaagatataaaatctcaaatcggt
gaaaaaggagatgaaagtaatactgtaactcttcaagattctaccgtatctccagattta
ttacaagtttatgatgatgtattgagtacttctgagggaaaaagtaaaagtaacaaagat
gcagaccattccttttcaaatccttctgtgccagaatcaaatctaaggactagaaatgcc
aataagaggttacataagcgggattctatagaaaatagcatgggggaatcctcaaaaata
gggacatcagacattcctttgctttctgaaaaaactcttcagacagtagaatgccagcac
aagagaagtaggagggtgaggcgatctaaaggttgtgattgttgtggagaaaaatcacag
tctcaggaaaagtcatttattgggttaaaggatacagaaaattacgatgtaaaagtcaat
gaaacaaaaaagacagatggggaaacacctgtatctatttcagaaacttcgaaagctgat
ctgtcctcggaggttaaacttttagatgagcatcatagtgtgaatttccatttggatctc
aaggaggagaatgatactactaatgattcattaattatatctgaaactgagttaaaagaa
aatactactcaaagctttcttccttctgaaatggtaaaatttaaagaaacttctcgtagg
gattctgaggaagcaatatctctagaaacccaggagccatctaataagaaatgtaaaact
gttgacccacatttagatgtttccaaagatatttcactgaaatgtttttctttggagacc
aaagaagaaaagtcagaggccgctccgaaagaggaattgagtacagagaacattgttatt
gttgaatcaaatgcagaatcaaatcctgaagaagtagatgctatggaattgaatgtagaa
aatgatcagtctgaagctggcttctctgaacaaaagaatgtcaaaactagtatttcaggg
aaagaagtaacagaggaaaacagtgaaagaatggatacacctgaaaaactgaaagccaat
gaagcagtaactgaggaatttaatttagctactgattatttggatactcggacacctgta
aaagtgaatgctcaggtagagatctctgaacaaatagcggttggggagctaggcagagga
agtgatgaatctgatccaggctcatctgaagaaatgaacgctgaaatgaaaaattgtgaa
agaacagcggttggtgaggtgactactgaatccgaccacgtcactgaaacagaagacgaa
gatttaactaccacagcttctctgcctatagaagctgaaacaaaggagttagatgtagaa
gtcgatcgctttgttcccgacacacttgagatgatcactgaagaaggaaaggttgaccct
aacaaaactgaaacgaatactgaacctaataaattggaggaaacacagttagatgacaat
cagatggtagtggaaagtaatgaaactttactggaagttcaccatacttcagagaaagta
gaggagatagcacaacctctgacatctgaaacaggtatttctggacttatatcagaagac
agtaatacatctcctcaaaaattaaaggatattgatcctttactcatgtcagcaaacgag
agtcctagtggcatgcacacacgttgtgtgtggtctcctttggcttctccatccaccagc
attttaaagagaggactaaaaagaccccaagaagatgaaatctcgtcacctgtccacaag
gttcgccgtgtctcctttgcagatcctatataccaagcaggattggcagatgacattgat
aggcgatgctctattgttaggtgccattcttcaaatagttctctcatggtaaaaagtgtt
aaaacttcacctactgtgcaatctaagcataataccacttcagccaaaggatttctgtcc
ccaggatcacgtagctctaaatttaagagctcaaagaagtgtttaattgcagaaatggct
aaggaatcggtgccatgcccaacagaaagtgtttaccctgctttggtgaactgtgtagca
ccagttgaaatcatcttacctcagattacatccaacatgtgggcaagaggactgggacag
ctcattagagccaagaatataaaaacaattggcgatttgagtacccttacagcatctgaa
ataaaaactcttcctatccgttctccaaaagtgtctaatgtaaaaaaggctctcagaata
tatcatgagcagcaggtgaagtctcgtggactagaagagattccagtttttgatatttct
gaaaaaacaataaatggaatggaaaataaatctatctctcctgatgaagaaagacttgcc
tcagatttaatcgatcctgttgctttagaagctccgttatctaaaaatcttgtggcacag
attagtgcacttgctcttcaactagattcagaagatctctataattattcaggaagccag
ctatttgaaatgcacgagaaacttggtagcatggcaaactctataattaaaaatctgcag
tcacgttggaggtcaccagcccatgaaaattctttttag
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