KEGG   Bubalus bubalis (water buffalo): 102416570
Entry
102416570         CDS       T05912                                 
Symbol
GTF2H3
Name
(RefSeq) general transcription factor IIH subunit 3 isoform X1
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
bbub  Bubalus bubalis (water buffalo)
Pathway
bbub03022  Basal transcription factors
bbub03420  Nucleotide excision repair
bbub05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:bbub00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    102416570 (GTF2H3)
  09124 Replication and repair
   03420 Nucleotide excision repair
    102416570 (GTF2H3)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    102416570 (GTF2H3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:bbub03021]
    102416570 (GTF2H3)
   03400 DNA repair and recombination proteins [BR:bbub03400]
    102416570 (GTF2H3)
Transcription machinery [BR:bbub03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     102416570 (GTF2H3)
DNA repair and recombination proteins [BR:bbub03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     102416570 (GTF2H3)
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 102416570
NCBI-ProteinID: XP_006041460
LinkDB
Position
17:20629560..20651136
AA seq 309 aa
MVSDEDELNLLVIIVDTNPIWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVI
ASHIQESRFLYPGKNGRLGDFFGDPGNPSSEFTPSGSKDGKYELLTAANEVIAEEIKDLM
TKSDIEGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIKAAEDSALQYMNFMN
VIFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQRS
QLILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKISLPPVLKA
KKKKLKMSS
NT seq 930 nt   +upstreamnt  +downstreamnt
atggtctcagacgaagatgaattgaatcttctagttatcatagttgataccaaccctatt
tggtggggaaagcaagcattaaaggagtctcagtttactctgtcaaaatgcattgatgcc
gtgatggtgctgggaaattctcatttgttcatgaatcgttccaacaaactcgcagtgata
gcaagtcacattcaggaaagtcgattcttataccctggaaagaacggcagacttggagac
ttctttggagacccaggaaacccttcttctgaatttactccctcaggaagtaaagatgga
aaatacgagttgttgacagcagcaaatgaagttatcgctgaagagatcaaagatctaatg
accaaaagtgacatagagggtcaacacacagagactctgctggcaggatcccttgccaaa
gctctttgctacattcatagaatgaacaaggaagttaaagataatcaggaaatgaaatca
aggatattggtgattaaggctgcagaagacagtgccttgcagtatatgaacttcatgaat
gtcatctttgcagcacagaagcagaatattttgatcgatgcctgcgtgttagactccgat
tcaggactcctccaacaggcttgtgacatcacagggggactgtacttgaaggtgccccag
atgccttcccttctgcagtatctcctgtgggtttttcttcctgatcaagatcagaggtct
cagttaatcctcccacccccagttcatgttgactaccgggctgcttgcttctgtcatcga
aatctcattgaaatcggctacgtctgttctgtgtgcttgtcaatattctgcaatttcagc
ccaatctgtaccacatgcgagacagcctttaagatttctctgcctcctgtactgaaggcc
aagaaaaagaaactgaaaatgtcctcatga

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