Bubalus bubalis (water buffalo): 102416590
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Entry
102416590 CDS
T05912
Symbol
UBR1
Name
(RefSeq) E3 ubiquitin-protein ligase UBR1 isoform X1
KO
K10625
E3 ubiquitin-protein ligase UBR1 [EC:
2.3.2.27
]
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bbub04121
]
102416590 (UBR1)
Enzymes [BR:
bbub01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102416590 (UBR1)
Ubiquitin system [BR:
bbub04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
UBR box proteins
102416590 (UBR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRT6_C
WHD_UBR1
zf-UBR
ClpS
ATPase_2
Motif
Other DBs
NCBI-GeneID:
102416590
NCBI-ProteinID:
XP_006066239
LinkDB
All DBs
Position
11:64952684..65112918
Genome browser
AA seq
1753 aa
AA seq
DB search
MADEEAGDTERMEISTELPQTPQQLASCWDQQIDFYTIFLNYLAHVVPDIYFAEMDPDLE
KQEESIQRSIFTPLEWYLFGEDPDICLEKLKHSGAFQLCGKVFKSGETTYSCRDCAIDPT
CVLCMDCFQNSVHKNHRYKMHTSTGGGFCDCGDTEAWKTGPFCISHEPGRAGTTKENLRC
PLNEEVIAQARKIFPSVIKYIVEMTIWEEEKELPPELQKREKNDRYYCVLFNDEHHSYDH
VIYSLQRALDCELAEAQMHTTAIDKEGRRAVKAGAFAACQEAKEDIKSHSENVSQHPLHV
EVLHSEVMAHQKFALRLGSWMNKIMSYSSDFRQIFCQACLREEPGSENPCLISRLMLWDA
KLYKGARKILHELIFSSFFMEMEYKKFFAMEFVKYYKQLQKDYISDDHDRSISITALSVQ
MFTVPTLARHLIEEQNVISVITETLLEVLPEYLDRNNKFNFQGYSQDKLGRVYAVICDLK
YILISKPTVWTERLRMQFLEGFRSFLKILTCMQGMEEIRRQVGQHIEVDPDWEAAIAIQM
QLKNILLMFQEWCACDEELLLVAYKECHKAVMRCSTGFKSSSKTVIQLCGHTLETKSYKV
SEDLVSIHLPLSRTLAGLHVRLSRLGAVSRLHEFVPFEDFQVEVLVEYPLRCLVLVAQVV
AEMWRRNGLSLISQVFYYQDVKCREEMYDKDIIMLQIGASLMDPNKFLLLVLQRYELADA
FNKTISIKDQDLVKQYNTLIEEMLQVLIYIVGERYVPGVGNVTKEEVTMREITHLLCIEP
MPHSAIAKNLPENENNETGLENVINKVATFKKPGVSGHGVYELKDESLKDFNMYFYHYSK
TQHSKAEHMQKKRRKQENKDEALPPPPPPEFCPAFSKAVNLLNCDIMMYILRTIFERAVD
PDSNLWTEGMLQMAFHILALGLLEEKQQLQKSPEEEVTFDFYHKASRLGSSAMNAQNIQM
LLEKLKGIPQLEGQKDMITWILQMFDTVKRLREKSCLIVATTSGSDSIKNDEITHDKEKA
ERKRKAEAARLHRQKIMAQMSALQKNFIETHKLMYDSTSEMSGKEDSIMEEESIPAVSDY
SRIALGPKRGPSITEKEVLTCILCQEEQEVKIENNAMVLSACVQKSTALTQHRGKPIELS
GETMDPLFMDADLAYGTYTGSCGHVMHAVCWQKYFEAVQLSSQQRIHVDLFDLESGEYLC
PLCKSLCNTVIPIIPLQHQKISSENTEPLAQLLTLERWIQTVLARITGYNMKHAKGENPT
IPVLFDQGMGDSTLEFHSILSYGVQSSLNYSNSIKEMVLLFATTIYRIGLKVPPDETDPR
IPMMTWSTCAFTIQAIENLLGDEGKPLFGALQNRQHNGLKALMQFAIAQRVTCSQVLIQK
HLIRLLSVVLPNLQSEATPCLLSIDLFHVLVGTVLAFPSLYWDDAVDLQPSPVSSSYNHL
YLFHLITMAHMLQILLTIDTDLPLAQIQEESEEARSASSFLAEVSQYTSGCIGCGIPGWY
LWVSLKNGIIPYLRCAALFFHYLLGVTPPEELFTNAAEGEYNALCSYLSLPTNLFLLFQK
YWDTVRPLLQRWCTDPALLNCLKQKSTVVRYPRKRNSLIELPDDYSCLLNQASHFRCPRS
ADDERKHPVLCLFCGAILCSQNICCQEMVNGEEVGACIFHALHCGAGVCIFLKIRECRVV
LVEGKARGCAYPAPYLDEYGETDPGLKRGNPLHLSRERYRKLHLVWQQHCIIEEIARSQE
TNQMLFGFNWQLL
NT seq
5262 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaggaggctggggacacagagaggatggaaatcagcacggagttgccgcag
acccctcagcaactggcgtcttgctgggatcagcagattgatttttatactattttcttg
aactatttggcacacgtggtgcctgacatttattttgctgaaatggacccagatttggaa
aagcaggaggagagcatacagaggtcaatattcactcccctggaatggtacttatttgga
gaagatccagatatttgcttagagaaactgaagcacagtggagcatttcaactttgtggg
aaggttttcaaaagtggagagacaacatattcttgtagggactgtgcaattgatccaaca
tgtgtactctgtatggactgcttccagaatagtgttcataaaaatcatcgttacaagatg
catacttctactggaggaggattttgtgactgtggggacacagaagcatggaaaactggt
cctttttgtataagtcatgaacctggaagagcaggtaccacaaaagagaacttacgctgt
ccattgaatgaagaggtaattgcccaagccaggaaaatattcccttcggtgataaaatac
attgtagaaatgactatatgggaagaagaaaaagaactgcctcctgaactccagaaaagg
gagaaaaatgatagatactactgtgtccttttcaatgacgaacaccattcatatgaccat
gtcatatacagtctacaaagagctcttgactgtgaacttgcagaggcccagatgcacacc
accgccatagacaaagagggccgtcgggctgttaaagcaggtgcttttgctgcttgccag
gaagcaaaggaagatataaagagtcattcagaaaatgtctctcaacatccacttcatgta
gaagtattacactctgaggttatggcgcatcagaaatttgctttgcgtctggggtcctgg
atgaataaaattatgagctactcaagtgacttcagacagatcttttgccaagcttgcctt
agagaagaacctggctcagagaatccctgtctcataagcaggttaatgctttgggatgca
aaactttataaaggtgcccgtaagatccttcacgagttgatcttcagcagtttttttatg
gagatggaatacaaaaaattctttgctatggaatttgtgaagtattacaagcagctccag
aaagactatatcagtgatgaccatgacagaagtatctctataactgcactctcagttcag
atgtttactgttcctactttggctcgacatcttattgaagagcagaatgttatctctgtc
attactgaaactctcctggaagttttgcctgagtatttggataggaacaataaattcaac
ttccagggttatagccaagacaaattgggaagagtatatgcagtaatttgtgatctaaaa
tacatcctgatcagcaagcccacagtatggacagaaagattaagaatgcagttccttgaa
ggctttcgatcttttttgaagattcttacctgtatgcagggaatggaagaaatcagaagg
caagttgggcaacacatagaagtagatcctgactgggaggctgccattgctatacagatg
cagttgaagaatattttactaatgttccaagaatggtgtgcttgtgatgaagaactctta
ctagtggcttataaagaatgtcacaaagctgtgatgaggtgcagtacaggtttcaaatct
agtagcaaaacagtaatacaattgtgtggtcatactttggaaactaagtcctacaaagta
tctgaagatcttgtaagcatacatctgccactgtctaggactcttgctggtcttcatgtg
cgtttgagcaggctgggtgctgtttcaagactgcatgaatttgtgccttttgaggatttt
caagtagaggtactggttgaatatcctttacgttgtctggtattggttgcccaggttgtt
gctgagatgtggcgaagaaatgggctctctctcattagccaggtgttttattaccaagat
gttaaatgcagagaagaaatgtatgataaagatatcattatgcttcagattggtgcatct
ctaatggatcccaacaagttcttattactggtacttcagaggtatgaacttgctgatgct
tttaacaagaccatatccataaaagaccaggatttggttaagcagtataataccttaata
gaagaaatgcttcaagtcctcatctatatagtgggagagcgttacgtacctggagtgggg
aatgtgaccaaagaagaggtcacaatgagagaaattactcacttgctttgtattgaaccc
atgccacacagtgccattgccaaaaatttacctgagaatgaaaataatgaaactggctta
gagaatgtcataaacaaagtggccacatttaagaaaccaggtgtatcaggccatggagtt
tatgaactgaaggatgaatcactgaaagactttaatatgtacttttatcattactccaaa
acacagcatagcaaggctgaacatatgcagaagaaaaggagaaaacaggaaaacaaagat
gaagcattaccaccaccaccacctcctgaattctgccctgctttcagcaaagcagttaac
cttctcaattgtgatatcatgatgtacattctcaggaccatatttgagcgggcagtagat
ccagattctaacttgtggactgaaggaatgctccagatggcatttcacattctagcattg
ggcttactagaagaaaagcaacagcttcaaaaatctcctgaagaagaagtgacatttgac
ttttaccataaggcctcaagattgggaagttcagccatgaatgctcagaatatacaaatg
cttttggaaaaactcaaggggattccacagttagaaggccaaaaggacatgattacgtgg
atactccagatgtttgacaccgtgaagcgattaagagaaaaatcttgtttaattgtagca
actacatcaggatcagattctattaagaatgatgagattactcatgataaagaaaaagca
gaacgaaaaagaaaagctgaagctgctaggctgcatcgccagaagatcatggctcagatg
tctgccttacagaaaaacttcattgaaactcacaaactcatgtatgacagtacgtcagaa
atgtctgggaaagaagactccattatggaagaagagagcatcccagcagtcagtgactac
tctagaattgctttgggtcctaaacggggtccatcaattactgaaaaggaggtgctgacg
tgcatcctctgccaagaagaacaagaggtgaaaatagaaaataatgccatggtattatca
gcctgtgtccagaaatccaccgccttaacccagcacaggggaaaacccatagaactctca
ggggaaaccatggacccacttttcatggatgcagacttggcatatggaacttacacaggg
agctgtggtcacgtaatgcatgcagtgtgctggcagaagtattttgaagctgtacagctg
agctctcagcagcgcatacatgttgatcttttcgacttggagagtggagagtatctttgc
cctctatgcaagtctctgtgcaatactgtgatccccattattcctttgcaacatcaaaag
ataagcagcgagaatacagaacctcttgctcaacttttgaccctggaacgatggatacag
actgttctggccagaataacaggttataatatgaaacatgctaaaggagaaaacccaaca
attccagtcctgtttgatcaaggaatgggtgattctactcttgagttccattctattctg
agttatggagttcagtcttcgttaaattattctaatagcatcaaggaaatggtccttctc
tttgccacaacaatttatagaattggattgaaagtgcctcctgatgaaacggatcctcga
atccccatgatgacctggagcacatgtgcttttactatccaggcaattgaaaacctgttg
ggagatgaaggaaaacctttgtttggagcacttcaaaatagacagcataatggtctgaaa
gcattaatgcagtttgccattgcacaaagggttacctgttctcaggtcctgatacagaaa
catctgattcgtcttctatcagttgttcttcctaacctgcaatcagaagctacaccttgc
cttctatccatagatctatttcatgttttggtgggtactgtgttagcattcccgtccttg
tactgggatgatgctgttgatctgcagccttcaccagttagctcttcgtataaccacctt
tatctcttccatttgatcaccatggcacacatgcttcagatacttcttaccatagacaca
gacctcccccttgcacagatacaggaagagagtgaagaggctcgttctgcatcttctttc
ttggcagaagtttctcagtatacaagtggctgcattgggtgtggtattcctggctggtat
ttatgggtctccttgaagaatggcatcatcccatatcttcgctgtgctgcattgtttttc
cactatttacttggagtaactccacctgaagaactgtttaccaatgctgcagaaggagag
tacaatgcactctgtagctatttatctttacccacaaatttgttcctgcttttccagaaa
tactgggatactgtgaggcccctcctccagaggtggtgtacagaccctgccttactaaac
tgtttgaagcaaaaaagcactgtagtcaggtaccctagaaaaagaaatagtttgatagag
cttcctgatgactatagctgcctcctaaatcaagcttctcatttcaggtgcccacggtct
gcagatgacgagcgaaagcaccctgtcctctgtcttttctgcggagccatactatgttct
cagaacatttgctgccaagaaatggtgaatggggaagaggtgggagcttgcatttttcat
gcacttcactgtggtgctggagtctgcattttcctaaaaatcagagagtgtagagtggtc
ctggttgaaggtaaagccagaggctgtgcctatccagccccttatttagatgaatatgga
gaaacagatcctggcctgaagaggggcaacccccttcatttatctcgtgagcggtatcgg
aagctccatttggtgtggcaacagcactgcatcatagaagagattgccaggagccaggaa
actaatcagatgttatttggattcaactggcagttactgtga
DBGET
integrated database retrieval system
