Bubalus bubalis (water buffalo): 102416643
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Entry
102416643 CDS
T05912
Name
(RefSeq) LOW QUALITY PROTEIN: FRAS1-related extracellular matrix protein 3-like
KO
K23383
FRAS1-related extracellular matrix protein 3
Organism
bbub
Bubalus bubalis (water buffalo)
Brite
KEGG Orthology (KO) [BR:
bbub00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
102416643
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Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Big_9
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
102416643
NCBI-ProteinID:
XP_044786405
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Position
17:58196599..58240206
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AA seq
1728 aa
AA seq
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MDGISPRPAGTPLQLAAAPAYLLLSCPALQGQTPSPEAEPPRAPYLPTWGALGRSSPDGP
SILLANLGLRGPVGRSLWLDPLRDLVIRVQPGDRCEVTVLDALPPHHGALSPRRFPCAFG
PRQVRYTHWGPRSLGRARVRLQLGYDAATSTVPLPFMLAVDVVFHRLKLVTRNRPLAVEE
LHGWSHAIDRRVLAFASPEPGSAATRRCRLTPVPXEGGPLNEYGRLVDAAGAPLPRAKAI
YCEAFIRAGVRYQHTSTIPSPNRDYVPMVAELLGPGDPGAESEELLLREHFXLLVRILEG
SENTAPRPSHAAPMMLEVHQFLLTALTPDALAAEDKESKADDLVFNILNAPITTPGQQGY
VVSTDDPLGLPVSFFSQRELRELKIAYQPSMEKSDAEHLFQLEMEVVDADGATSDPFAFM
VVVKPLNTLTPVASYDWGLLLFXGQSRPLSRANSPQISVCDHLGEVKVSAIRGLQHGQLV
VLGVPAGCKHFTPTDLAAGRVVDQHDGSNTYSDNIVFRMEDGRHQVEFLFPLAIIPVDDE
PPVVTADTRLSVTEGQAVLISPFVLSAMDLDSEDSTIHCVLEDQPLVREKEEKGGGDLAP
GSSSSRQHLGEMLLRQSEAPQAPEDEGWYYMGQEGLYEKVVTEWLQQDIVEGRLFYHHLG
PLGPQSIMVQITFHVQDDHDPPNLSKQHFFTIRVQPVDLQSPELFPGTTLEMTVQQYQLT
HFQKKLLQYIDRDSDDQHLWYTLLMPPTDTDGNHQVQAGDIVLADSPDTPVVHFTQAQVN
HHEVAYQPPRKKLGIVRWIVQFTYQVEDAAGNSVPGTFTLFLRPVDNQPPQVTNRGFTVL
EGESFSLSSNELHVSDPDTDIDQIVFILVWGPQHGHLQYLKKCMVPGEHFTQAHIVNGSI
SYQNRRKQATSDTFHLEVSDMVHHIPITVQISVHPTAADKSPRTSIIGSALLDVFIDVLE
NTATEITMDIIHGLKDTGNLMLSFTVEDSSKLGTILVNGLPTERFTQEDLISGTVVYVHT
GGEVGFQKQPDAFRLALSKDSHQRMMGDSTVEEVQVQVVVLPVNNVAPKVLVREPYVVHE
GGKSALTLQHLSIEDVDTPQDEILCTVTGQPVSGYLENMTPAPGSEETRAGYPISAFSIR
DVQLRHVNYVQSIHKGVEPQKDQFTFYCSDGINFSPNVFFPIMILPTNDEQPELFSHEFV
VLEGMSIVIDTPLLNGADADLPPNELHFQLTALPQHGRIIXQLATESQPIRSFTLXEIQE
ASTIVYEHDDSETTEDSFEFWLSDGKHATHRTVPIVVILVDDETPWLTINNGLEVETGHT
EVITNQVLKATDLDSDDKSLSFILRSGPQQGLLQRLRKPRGEVRNNLTLGMKFTQGEIDQ
GLICYTHTSQGLHDLIKFDVTDGINPLPDCYFNITIGSLDRVFFPEVVSKGVTLTEDGRV
TLTTDLLSTNDVNSFDEQLHFSITRAPSLGHLEISDHPGEPITSFTQRQLAGKMVYVRTS
NDEKKMDSFEFQETDEHNPVFQTFRIFFTDVNNKKPIMTIHNLILQEGERKCITPFELTA
EDKDTPDDLLLFTITQVPIHGRILYNGSRPVTTFTQRDLNENLVCYWHDGSETTEDSFSL
TLTDGTHADFCVFPHTAVETHRPQVMWIHIRNSLDNRFSQTAFNRDALALEHLHPGHVGF
LITSRSLKTEDWDSSYRLQKYKVTRGPVHGFLINTGLGNESTRVFTQG
NT seq
5186 nt
NT seq
+upstream
nt +downstream
nt
atggatggcatttctccgcgccctgctgggacgcccctgcagcttgccgccgcgcccgcc
tacctgctcctgagctgccctgccctacagggacagacaccctcgcctgaggctgagccc
cctcgggcgccctaccttcccacctggggggccctgggccgtagcagccccgacggcccc
agcatcctccttgccaacctcgggctccggggacccgtgggccgctcgctttggctcgac
ccgctccgggacctggtgattcgagtgcagccgggggaccggtgcgaggtgacggtgttg
gacgccctgccgccgcatcacggcgcgctctctccgcgccgcttcccctgcgccttcggg
ccccgccaggtccgctacactcactggggcccccgcagtctcggacgcgcgcgggtgagg
ctgcagctgggctacgacgccgcgacttccacggtcccgctgcccttcatgctcgcggtg
gacgtggtcttccaccggctgaagctggtgacccgcaaccggcctttggcggtggaggag
ctgcacggctggagccacgccattgacaggagagtgctggcctttgcttccccggagccg
gggtccgcggccacccgcaggtgccggctcacccctgttcccccgagggtggcccactga
acgagtatgggcgtttggtggatgccgcgggggcccctctccccagggccaaggccatat
actgtgaggcttttatccgggctggggtgcgctaccagcacacctccaccatcccctcgc
ccaaccgggactatgtgcccatggtggcggagctgctagggccaggggacccaggagctg
agtcagaggagttgctgctccgagaacatttctagctgctggtgaggatccttgagggat
ccgagaacacggcgcccaggcccagccacgcagctccaatgatgctggaggtccatcagt
tcctgctgacagccctgacgcccgacgccctggctgcagaggacaaggagtctaaagccg
atgacctggtcttcaacattctcaatgctcccatcaccacgccggggcagcagggctacg
tggtcagcactgacgaccccctgggccttccagtatccttcttcagccagcgggagctgc
gggaactgaaaattgcttatcagccctctatggagaaatcggatgcggagcacctcttcc
aactggagatggaggtggtggacgcagatggtgccacctcagacccctttgcctttatgg
tggtcgtgaaacccctgaacaccctgaccccggtggctagctatgactggggactactac
ttttttaaggtcagtcaaggcccctctccagagccaacagccctcagatcagtgtgtgtg
atcacctgggagaggtgaaagtgtctgctatcaggggcttgcaacatgggcagctggtcg
tgcttggggtaccagcagggtgcaagcatttcacgccaacggacctggcagcagggcgag
tggtggaccagcatgatggcagcaacacctacagcgacaacattgtcttccggatggagg
atgggcgccaccaggtggaattcctcttccctctcgccatcatccctgttgatgatgaac
caccagtggtcactgccgacaccagactctcggtgacagaagggcaggcagtcctgatct
ccccctttgtcctgagtgcaatggatcttgactctgaggactcgaccatccactgtgtgc
tggaggaccagcctctggtaagagaaaaggaagaaaagggggggggggatctggctcccg
gttcctccagctcaaggcagcatctgggggagatgctgctgcggcagtcggaagcacctc
aggctcctgaagatgaaggctggtattacatgggacaggaaggactttatgagaaggtgg
tgactgagtggcttcaacaagacatagtggaagggagactcttctaccaccatcttggac
cccttggccctcaatccataatggtccagataactttccatgtgcaggatgaccatgacc
cacccaatctatccaagcagcatttcttcaccatcagagtccaaccagtggatctgcaga
gtccagagctatttccaggaactaccctagaaatgaccgtgcagcaataccaactcactc
acttccagaagaaactcctccaatatattgaccgggactcagatgaccagcacctgtggt
acaccctgctgatgccccctacggacacagatggcaaccaccaagtccaggctggagaca
ttgtgctcgctgattcaccagacacacccgttgtgcacttcacccaggcccaggtaaatc
accatgaggttgcctaccagcccccccggaagaagctgggaattgtacggtggattgtgc
agttcacctaccaggtggaggatgctgcaggcaatagtgtacctggcacattcacattat
tcctgaggcctgtggacaaccagcctccccaagtcaccaacagaggctttactgtcttag
aaggagagagtttcagcctcagcagtaatgagctgcatgtttcagaccctgacacagaca
ttgaccagattgtcttcatattagtttggggtccccaacatggacatttgcagtacttaa
aaaaatgtatggtcccaggggaacatttcacacaagctcatattgttaatgggagtatct
cttatcagaaccgcagaaaacaggccaccagtgataccttccatctggaggtaagtgaca
tggtgcatcacatacccatcactgtccagatttctgtgcatcccacagcagctgacaaaa
gtcccaggacctctattataggtagtgcattattagatgtgttcatagatgtactagaaa
atacagccactgagatcaccatggacatcatccatggtctaaaggacacaggcaacttga
tgctctctttcactgtggaagacagctccaaattgggcactattctggtgaatggtttac
ccacagaacggttcacccaagaggacctcatcagtgggacagtagtctatgtccacacgg
gaggtgaagttggattccagaagcagcctgatgccttcaggcttgccctctccaaggatt
ctcatcagcggatgatgggagacagcacagtggaagaggtgcaggttcaggtggtggtgc
tgcccgtcaacaatgtggcccctaaggtcttggtcagggagccttacgttgtccatgaag
gtgggaagagtgccttgaccttacaacatctcagcattgaagatgtagacactccccaag
atgaaattctctgcacagtaactggtcagccagtctctggctacctggaaaatatgacac
cagctcctggatcagaagagacccgagctggttatcccatcagcgctttctccatcagag
atgtccagctaagacatgtcaactatgtacagagtatccacaagggggtagaaccacaaa
aagatcaattcactttttattgctctgatggcatcaacttctccccaaatgtcttctttc
ctataatgatcttacccaccaatgatgagcagcctgaacttttttcccatgagtttgttg
tcctagagggaatgagcattgtcatagacaccccactgctcaatggagccgatgctgacc
tgccaccaaacgagcttcactttcagctcacagccctccctcagcatgggcgaatcatat
agcagctggccacagagagccagcccatccgtagcttcaccttataggagattcaggaag
cttccaccattgtgtatgagcacgatgactctgagaccacagaggacagttttgagttct
ggctgagtgacggcaagcacgccacccacaggacggtacccattgtggtgatcctggtgg
acgatgaaaccccttggctgaccatcaacaatgggctggaagtagagactggacacactg
aggtcatcaccaatcaggtcctcaaagccacagatcttgactcagatgataagagcctca
gttttatcctccgctctgggcctcaacaagggcttctacagcgactgagaaaacccagag
gggaggtgaggaacaacctcaccctgggaatgaagttcacccagggtgagattgaccaag
gcctcatctgttacacccacacaagccaaggacttcatgaccttatcaagtttgatgtga
ctgatgggattaaccctttgccagactgctatttcaacatcaccattggcagcttagaca
gggtcttcttccctgaggtggttagcaaaggggtcaccttgacagaagatggcagagtga
ccctcaccacggatctgcttagcaccaatgacgtcaacagctttgatgaacagctgcact
tcagcatcacaagggctcccagcctggggcacttggaaatctctgaccaccctggggagc
ccattacctctttcactcagcggcagttggctggcaagatggtctatgttcgcacttcaa
atgatgagaaaaagatggacagctttgagtttcaagagactgatgaacacaatcccgtgt
ttcaaaccttcaggatctttttcacagatgtgaataataagaaacctatcatgaccatcc
ataacctgatactgcaagaaggggaaagaaaatgcatcactccctttgagttgacagcag
aagacaaggataccccagatgatctcctcctctttaccatcacccaggtccccatccatg
gcaggattttgtataacggcagtcgtcctgtgaccaccttcacccaacgggacctgaacg
agaacttggtttgctactggcacgacggcagtgagacaactgaagacagtttctccttga
ctctgacagatggcactcatgctgatttctgtgtcttcccacacactgctgtggagacac
acagacctcaggtaatgtggattcacataagaaactccctagacaacaggttctcccaga
ctgcctttaacagagatgccctggccttggaacaccttcaccctggacatgtgggcttcc
tgattaccagcaggtctctgaagacagaggattgggacagttcctacaggctccagaagt
ataaagtaaccagaggaccagtgcatggcttccttatcaacactggccttggaaatgaga
gcacacgagtttttacacaaggttag
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